Difference between revisions of "Os01g0832900"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os01g0832900| Description = Similar to Ser-Thr protein kinase-like protein| Version = NM_001051243.1 GI:115440856 GeneID:4327402| Length = 5122 ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0832900|
 
GeneName = Os01g0832900|

Revision as of 19:01, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0832900

Description

Similar to Ser-Thr protein kinase-like protein

Version

NM_001051243.1 GI:115440856 GeneID:4327402

Length

5122 bp

Definition

Oryza sativa Japonica Group Os01g0832900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37409033..37414154

Sequence Coding Region

37409235..37409520,37409921..37410538,37411320..37411620,37411725..37412004,37412303..37412410
,37412676..37412954,37413393..37413536,37413679..37413852

Expression

GEO Profiles:Os01g0832900

Genome Context

<gbrowseImage1> name=NC_008394:37409033..37414154 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:37409033..37414154 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgccgggcctggacgaggtcatggcgttcctcaccgaccacgggttcgcgggcgccgcctccgcgctccgcgacgacgtcctcgcccgcgccgcgtccgccgccggggacgccggctccgattccgatgccgcattagatccccagctcccgcccctccggttgccggcgtccacgtccggaggcggtggggcgccggcggcgccgcctgcaagccctggctccagctctgactcggcgtcgtcctctgccttcgtcagcatgcgctcctcgccctcagggatgctgaatccatatggagtctggtcgccgcggcactcggacacgtcgtcatcggagatggagtttggcacagcgcgtcagtacgacgccaccgacttctttttccaagaaggttggctttacgacgaccatctcttccatagcaagtcggagctggacgacgacaatggagaagacaaagaggaggacaagtttgttcttggtgtccacgatggctcagggaggatagagatgggagtgcttagtgccggtgatgaccaccgtcatgaacatgttggcaatgacggctgtgagggatgtgctgaggtgtacacatgttcatcaccgctctgcggatgctgtggtgagggactgaagaacggggggctagaggtggtgaaggattctagctccactgtctatgggaggtaccagatcattgatgaccagacagagatacttgatgagtgtggcatggatgggtttcagttgaagcaccctgcggatgttgtgcttgagtgtcatttgccaagagattctggggaaggagatgagcgatcggagctgagtgtagtggagaaggagcttcaaatgctcagttcatttggtactagggttgatgcagatgcttttacaagtcctggacttgtacacgatatcacagacaatgccaaactggatgatagcattgaaaagaatatgaaaaacagtagcgacaaatatctgaaggaaggttatagcatagagcctttccctgagagttctgttgatgatacctttgagtttggagatattggaccattgaatactgatgcgcaaaactcaactgctgctaaagctgaggaagaaaatccagagacaaatgttgatctcgctctcgctaatttccatcgagaatatgaggtatttgaactgagaattgtccaccgcaagaacaggaccggctttgaagtaagcaaagatttccccattgtcataaattcagttatagcaggaagatattatgtcactgaataccttggctcagctgcattcagtaaagttgtgcaagcacatgatcttcagacaggaactgatgtttgccttaaaataattaaaaatgataaggatttctttgatcagagtctggatgagatcaagcttctgaagtttgtgaacaaatacgatccattagatgagtatcatgtgttgcgtctctatgactatttttatcatcaggaacacctttttattgtcactgaattactgcgagcaaatctatatgagttccagaaatataatcaggaatctggtggtgaagcatacttcacattgcctagaatacaggcaatagctcggcaatgtttagaagccttggtatatttgcatcatttaaggatcattcattgtgacctgaagcctgaaaacatccttatcaagagctacagcagatgtgaaattaaggttatcgatcttggaagtagttgcttcttgacagacaacttatgtctctatgtacaatcacggtcatatcgagctcctgaggtcattctggggcttccttatgatcagaggattgatatttggtctcttggttgcatccttgcggaactctacactggtgaggtactatttcctaatgaaccagtgcccataatgcttgctcaaatgattgggataattggcccaattgacatggaaatgcttgccctgggagaggagacgcaaaagtatttcactgatgattacgaccttttcaccaagaatgaggaaacagatcaattcgagtatttgatcccagaaaagtcttctctgcagcatcacttacaatgccctgattcagagtttgttgattttctatcctatttgctgcaaataaaccccaggagaagaccaacggcaagtgaagcgctacaacatcaatggctttcatttgcatactaa</cdnaseq>

Protein Sequence

<aaseq>MAAPGLDEVMAFLTDHGFAGAASALRDDVLARAASAAGDAGSDS DAALDPQLPPLRLPASTSGGGGAPAAPPASPGSSSDSASSSAFVSMRSSPSGMLNPYG VWSPRHSDTSSSEMEFGTARQYDATDFFFQEGWLYDDHLFHSKSELDDDNGEDKEEDK FVLGVHDGSGRIEMGVLSAGDDHRHEHVGNDGCEGCAEVYTCSSPLCGCCGEGLKNGG LEVVKDSSSTVYGRYQIIDDQTEILDECGMDGFQLKHPADVVLECHLPRDSGEGDERS ELSVVEKELQMLSSFGTRVDADAFTSPGLVHDITDNAKLDDSIEKNMKNSSDKYLKEG YSIEPFPESSVDDTFEFGDIGPLNTDAQNSTAAKAEEENPETNVDLALANFHREYEVF ELRIVHRKNRTGFEVSKDFPIVINSVIAGRYYVTEYLGSAAFSKVVQAHDLQTGTDVC LKIIKNDKDFFDQSLDEIKLLKFVNKYDPLDEYHVLRLYDYFYHQEHLFIVTELLRAN LYEFQKYNQESGGEAYFTLPRIQAIARQCLEALVYLHHLRIIHCDLKPENILIKSYSR CEIKVIDLGSSCFLTDNLCLYVQSRSYRAPEVILGLPYDQRIDIWSLGCILAELYTGE VLFPNEPVPIMLAQMIGIIGPIDMEMLALGEETQKYFTDDYDLFTKNEETDQFEYLIP EKSSLQHHLQCPDSEFVDFLSYLLQINPRRRPTASEALQHQWLSFAY</aaseq>

Gene Sequence

<dnaseqindica>203..488#889..1506#2288..2588#2693..2972#3271..3378#3644..3922#4361..4504#4647..4820#ctctctttcttctgacttcttttgtgcttcttccaagcttccttccagtcctcgctctcgtcctccctccgtcactcgcagcgcagaccaaggaaggcttctcgcctctcgccttcgcctcgcttcgcttccaagtcccaatgccgacgcaacagcttacctcacgcggcgcgccacgcgcttgagaggggccgccaaccgcatggcggcgccgggcctggacgaggtcatggcgttcctcaccgaccacgggttcgcgggcgccgcctccgcgctccgcgacgacgtcctcgcccgcgccgcgtccgccgccggggacgccggctccgattccgatgccgcattagatccccagctcccgcccctccggttgccggcgtccacgtccggaggcggtggggcgccggcggcgccgcctgcaagccctggctccagctctgactcggcgtcgtcctctgccttcgtcagcatgcgctcctcgccctcaggtagttaggggatcagggcacaaggctgaatttttttttttcatcatctctcagcgttaaacccatatcttctcgttttccgaggtcgtcagttatgtcgcgcgaaatctcgatctgtgcgccgatgtttttggcggctatggttggctttgggtccaattcgaacctgctggatcaaagccagcatatctctgtgcatatgttcatggaggaaaattgtgatcttttgatctagtagggtgctggttaaaccccttcccctgggttttgtacaccaatgatactgcttgtcgttaaattctgatttctcagtatagttgagtgttctaatttgcggatttgtgggtgtttaagtcacgattttggtcctaaatttgatatattttgtttgtgagattagggatgctgaatccatatggagtctggtcgccgcggcactcggacacgtcgtcatcggagatggagtttggcacagcgcgtcagtacgacgccaccgacttctttttccaagaaggttggctttacgacgaccatctcttccatagcaagtcggagctggacgacgacaatggagaagacaaagaggaggacaagtttgttcttggtgtccacgatggctcagggaggatagagatgggagtgcttagtgccggtgatgaccaccgtcatgaacatgttggcaatgacggctgtgagggatgtgctgaggtgtacacatgttcatcaccgctctgcggatgctgtggtgagggactgaagaacggggggctagaggtggtgaaggattctagctccactgtctatgggaggtaccagatcattgatgaccagacagagatacttgatgagtgtggcatggatgggtttcagttgaagcaccctgcggatgttgtgcttgagtgtcatttgccaagagattctggggaaggagatgagcgatcggagctgagtgtagtggagaaggagcttcaaatgctcagttcatttggtactagggttgatgcagatgcttttacaagtaagtacttctgaaatcttaaactttctgcttgatttcacccttcaatattagtactccactaaatacagtatttgtactaattttcaacattaaccctctttgctccgatgaagatattatgaatttatttattgaagtgggagaacagggttgaattacagcattaaagagtttggatactgttaggcaccgtttggatgccagaattgaattgtgtagttatcccaaaaaaaaaaagaattgaattgtgtttgtggaaatggtggtccaattcaaatttcaactataattggtgttgggatccaattcaacttgaattgtgtatgagtggtgcagacaatgctgaatgagagatgttttgttactgttgtaaactgaaatttgctgttaaatatgcacagagctaaaaaaaaatggtgcattttagtggtaacctcttccagaaacattactgctgttatacgattatgcttcacatgggttttctctgtatattagaagaattgaaaattttcttctgctcttcaatataatatgtaacttggttttggtaacactacagaaatgaaatgaatctggatttaaaaatgcacatttgaggagacattttttaacaaagaaaggccaaacctattttattatcagtcttgctgaactgttgtttgtttaccaacgtttgtgtgaatttgcaatttaattccagtcatcttcttatcctgtataaagatcatttgctgcttgcttcattaggtttactgtaaatgtttgttgtctttaggtcctggacttgtacacgatatcacagacaatgccaaactggatgatagcattgaaaagaatatgaaaaacagtagcgacaaatatctgaaggaaggttatagcatagagcctttccctgagagttctgttgatgatacctttgagtttggagatattggaccattgaatactgatgcgcaaaactcaactgctgctaaagctgaggaagaaaatccagagacaaatgttgatctcgctctcgctaatttccatcgagaatatgaggtatttgaactgagaattgtccaccgcaagaacaggttcacaatcacttcttgtttctcccttctcttcttccatttttggttgctaaatgatacttccaagttaattcttatgctcatatagcatgtcttcactgcaggaccggctttgaagtaagcaaagatttccccattgtcataaattcagttatagcaggaagatattatgtcactgaataccttggctcagctgcattcagtaaagttgtgcaagcacatgatcttcagacaggaactgatgtttgccttaaaataattaaaaatgataaggatttctttgatcagagtctggatgagatcaagcttctgaagtttgtgaacaaatacgatccattagatgagtatcatgtgttgcgtctctatgactatttttatcatcaggtatatcacttaagaaataaagttgactaagatactccctttgcattgatgttatgctgcatactttttggctattcggaagctaaggaagtttgaaagggatatattgttggtctttggcaactttgaaaaggatctatgatggctaaaagcaatatagcttcttattttcagttgatttcttaaattgcttgcatgcttgtttaattgtagaaaaatcatagaatttattagtactttattttttgcggttgcaaaatcatagaatttctgtaacggcatattgacattgcaacaggaacacctttttattgtcactgaattactgcgagcaaatctatatgagttccagaaatataatcaggaatctggtggtgaagcatacttcacattgcctagaatacaggtatgtttgaccgttctatactaagatgctatctataattgttgcatatgcatagacacttacagttcaatttgtagtatgcacgatatgcaatgttccaaaccaatttaatatgcttcatttaaacataaagtttttgaaccgtaattgatcattttcttggaatgatactgctgtaaataaaatgattaactgttttaagtgcaattaaatttaacttaagaaaaaaggttttgatgaacaaaagttcccccttttctttcaggcaatagctcggcaatgtttagaagccttggtatatttgcatcatttaaggatcattcattgtgacctgaagcctgaaaacatccttatcaagagctacagcagatgtgaaattaaggttatcgatcttggaagtagttgcttcttgacagacaacttatgtctctatgtacaatcacggtcatatcgagctcctgaggtcattctggggcttccttatgatcagaggattgatatttggtctcttggttgcatccttgcggaactctacactggtgaggtaagaagcttctgtaccttgctaatccttctttttggacacgtgctgaccttttagctgtgttaaacccatagtggcctgttgtcatacagcacatagaattttatggagatttcaacacactgcattaatagtgaagtgctgtgttggcatgtttgataccttctttcttgtctaaatgctatgcaacatatagctccaaacagaaaatagagatcaaacttctgtgccagaattatttttttttgaacgaatgcctgagtaaattttggggcacaaggactggctttaataaataaagacaaataagaacgttttacatggaaacgaataatgtgcttcaagttgttttgttgttatccatatggaaacaaagttgttttaaaatttaaaaatgctaatcgtctaattataattcctaactggtacacataacaggtactatttcctaatgaaccagtgcccataatgcttgctcaaatgattgggataattggcccaattgacatggaaatgcttgccctgggagaggagacgcaaaagtatttcactgatgattacgaccttttcaccaagaatgaggtacactattcttagtgctagtggaagtagcctttcctgtgaccactcgaatttcatcatgtccatctctctctgtggactgtgcgagttataacacattgaacactgaactcattttgttgtttacctcatttctattcaggaaacagatcaattcgagtatttgatcccagaaaagtcttctctgcagcatcacttacaatgccctgattcagagtttgttgattttctatcctatttgctgcaaataaaccccaggagaagaccaacggcaagtgaagcgctacaacatcaatggctttcatttgcatactaatgactaatgagaaaccaacaggtcatttcgtttgttttaagtgctttgttcaactgctcctaagctggatccctgcaatcttctaaagatggattgattttctgatgtttccccatgagtccatgacatgaaacattttacactttccttgagttttagaaggatttacctttgtgcttgctgaactagcatgcggcacaattttcttgtttcgtttcttcagggcaattcttggagtggaagccctgctctcagtgttaagattcgtgagtgtatgtaaatatgaggaaattttcctgtgt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0832900, RefSeq:Os01g0832900