Difference between revisions of "Os01g0838900"

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(Created page with "{{JaponicaGene| GeneName = Os01g0838900| Description = Trp repressor/replication initiator domain containing protein| Version = NM_001051284.1 GI:115440938 GeneID:4327379| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0838900|
 
GeneName = Os01g0838900|

Revision as of 19:01, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0838900

Description

Trp repressor/replication initiator domain containing protein

Version

NM_001051284.1 GI:115440938 GeneID:4327379

Length

3335 bp

Definition

Oryza sativa Japonica Group Os01g0838900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37740105..37743439

Sequence Coding Region

37740234..37741291,37743215..37743347

Expression

GEO Profiles:Os01g0838900

Genome Context

<gbrowseImage1> name=NC_008394:37740105..37743439 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:37740105..37743439 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaccactgaggggagccaagcggcggaagcggcagccggagaaggcgttgccggcggcggggcaggcgatgccggcgccggcgcccggcggggattggtgggacggcttcgcccgcaggcttgcagcaggacaattttccaaagactgccaaaactttgagtccgtcttcaagatgtcgaggaagacctttgactacctttgctctctgattagtggggacttcacaagaaagacacaaagtttcagaaatttcaggtttggagacaaggcaattctaggcgtggaagatcaagtaggtgttgctctgttaagattgaccaccggtgagtcgcttttgagcatagggaaccgcttcgggatgaaccactcagctatctcaaacatcacttggaagtttattgaggccttggaggagcgcgctgccaatcatcttaagtggcctactcctgaggagatggcaaccgtcaaatctaagtttgaaaagattcagggcctccccaactgctgcggcgccatagacacaacgcacatcctcatgtgctcttcagctcagcctaacagcaatgtctggctcgacggcgagaacaggaacagcatggtcctgcaggccatcgtcgatgccgacatgcggttcagagacgttgtcagtggctggcctggcagcttgaatgactcgtgcatcctgcgcacctcaggattctacaggctctgcgagaaaggcgcgaggctggacggacaaacggagcttccaggagagccagctgggtcagtggtcagagactacattcttggggatgcaagctaccctctccttccctggctgatgactccataccgtgagaaggatctatctccggcgaaagccgacttcaacaagcggcacgccgcgacgatcatggtggtgcagggtgctctggccaagctgaaggagaggtggcaggttctcaagggagagctgtggaggccggacaagcaccggctgccgaggatcatctacgtctgctgcctgctcaccaacatcatgatcgacctcgaggacgcggcgaggggcggcatgccgccgtcgcacaaccacgacgacggctaccggcagcagttcagcgatgtcgccgacgtcggcgcggccgcgctgagggaccagctgtgccagtatgtgagcaggattggcagcagtttgccggcgtga</cdnaseq>

Protein Sequence

<aaseq>MAPLRGAKRRKRQPEKALPAAGQAMPAPAPGGDWWDGFARRLAA GQFSKDCQNFESVFKMSRKTFDYLCSLISGDFTRKTQSFRNFRFGDKAILGVEDQVGV ALLRLTTGESLLSIGNRFGMNHSAISNITWKFIEALEERAANHLKWPTPEEMATVKSK FEKIQGLPNCCGAIDTTHILMCSSAQPNSNVWLDGENRNSMVLQAIVDADMRFRDVVS GWPGSLNDSCILRTSGFYRLCEKGARLDGQTELPGEPAGSVVRDYILGDASYPLLPWL MTPYREKDLSPAKADFNKRHAATIMVVQGALAKLKERWQVLKGELWRPDKHRLPRIIY VCCLLTNIMIDLEDAARGGMPPSHNHDDGYRQQFSDVADVGAAALRDQLCQYVSRIGS SLPA</aaseq>

Gene Sequence

<dnaseqindica>2149..3206#93..225#ctttggttggtttgctcgttttttttttcttttcttgatctcttctcctccttccggggttcgcgttcgcgtcgctctcgtctcgtctcgtcatggcaccactgaggggagccaagcggcggaagcggcagccggagaaggcgttgccggcggcggggcaggcgatgccggcgccggcgcccggcggggattggtgggacggcttcgcccgcaggcttgcagcaggtatacgtcttgccgttcgttcgttcgtctcttccctgtttgcgagcactgtgctcctcgtccttaaccatgtccatgcccgttccctggttccttggctcgctgtaaacctcgcgcccgcgcaccgtaaccctcgtcggcggcgagtaatgcgtgcttaaccccctcgcgcgcttgggattgttcgcgggcggattccgcggggttagatcagggagacccgccgttgaatttgcactgttcgtgcctgcgcggtatctgttcgatgcggtcgcttaatccgcccgtgcagtgctccttaatcagggtggttactgttgcaaatccgctgtttcggtgggctttgttttggaggtggtgggattgtacggtgctccgaggcagcgaaccatctcgggcgggggggatgttctggattggagaccaccatggatgtcgattgctccgagggtatgagcaaggaaaagcttgtgaatgccgttgctctgatgggtatcgatcgagtagaccgtgtttgggagaagaattggttgtgccatctgtggttttgttgtttccttctccaatccagatctatgaagcctttggtgcaatggtattttggggctagaaatttacgggtgctgttggcttttgcccattgtgtcaatctaattcagaataggttggttgactgttcatgccttgacattgcaagaactaacttcttttctctttgcaacttatgaagtaacttcattttgctaaggggaaaacaacatctcccggagaacaattagtctgtacttgccatcgaattgctttgcctgttcagtccagaattgtaaagtgtagcatatgcgttttttttaagtaattagctcatctgttcacaggtagtttccccaatttcatcatccgattggctgttaatatttttttttaaaggaaacacgtgaggggattgggttccaatagattgactggcaaatccagaaaatgattagtgtggctcaaaggtaggtcggttgaatgatgtgttccgagaaatggattcccacgataagtttcttgaatcttatagtacctggtaccacagcaaatactgttttataattcaatgtgatagatcatccaggagtatagattcattaggcctctctgtatggtgttcaagtgagtctttcagagatcattgggtgaagcagcccatacaagtacaatttagcttgaacaaataaagtagatttgtatagctatttgtctggctgctgtattcttattttgatcatacatgttcttacaaaaacatagacaatatatttttgaattcttgaagtcgttagtgatatttattctgagcttccctgattgctgaaatgatctgaaacactggaaaacattggttttgaatgcctacctatcctttatgacaagtgacattgttagaattttcaaattttgacaagagtgacattttgaacaattagtacaaacctgagcatcaagtgtgagtgatttaagaaggtagatacaggaatgatagcattctagtcatctatttaacaagggcagtgtcccttctactgatgattcttctaaattttgaatcgatattcactgtattgccaaaacagctaaaccttttctcatataatatgctcagttcattcatgatattgctagtattgttcattttctgttctcgacacttgtggaccatgttctattagatttgaatctcttctgttaaatttgctatcataaggtttaccccgtttcttcctctgcccttctaatttcaatatgaggagaacgaatcgaattctttgaatttcaatatatctgaattttcccttttatgctttcaagttccctgccaaataatttatgatatgctcgactaacgccactgcgatctttgactatgtcttatgtccacaggacaattttccaaagactgccaaaactttgagtccgtcttcaagatgtcgaggaagacctttgactacctttgctctctgattagtggggacttcacaagaaagacacaaagtttcagaaatttcaggtttggagacaaggcaattctaggcgtggaagatcaagtaggtgttgctctgttaagattgaccaccggtgagtcgcttttgagcatagggaaccgcttcgggatgaaccactcagctatctcaaacatcacttggaagtttattgaggccttggaggagcgcgctgccaatcatcttaagtggcctactcctgaggagatggcaaccgtcaaatctaagtttgaaaagattcagggcctccccaactgctgcggcgccatagacacaacgcacatcctcatgtgctcttcagctcagcctaacagcaatgtctggctcgacggcgagaacaggaacagcatggtcctgcaggccatcgtcgatgccgacatgcggttcagagacgttgtcagtggctggcctggcagcttgaatgactcgtgcatcctgcgcacctcaggattctacaggctctgcgagaaaggcgcgaggctggacggacaaacggagcttccaggagagccagctgggtcagtggtcagagactacattcttggggatgcaagctaccctctccttccctggctgatgactccataccgtgagaaggatctatctccggcgaaagccgacttcaacaagcggcacgccgcgacgatcatggtggtgcagggtgctctggccaagctgaaggagaggtggcaggttctcaagggagagctgtggaggccggacaagcaccggctgccgaggatcatctacgtctgctgcctgctcaccaacatcatgatcgacctcgaggacgcggcgaggggcggcatgccgccgtcgcacaaccacgacgacggctaccggcagcagttcagcgatgtcgccgacgtcggcgcggccgcgctgagggaccagctgtgccagtatgtgagcaggattggcagcagtttgccggcgtgattctggtcgctttgcttgattacttttgtctctttttgtttaccttgacatgagatgaaacataccaacaggtgatagaattgtaatgcgaattttggttactttcgatgattggtcggttttgatagc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0838900, RefSeq:Os01g0838900