Difference between revisions of "Os01g0877300"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os01g0877300| Description = Mitotic checkpoint family protein| Version = NM_001051508.1 GI:115441386 GeneID:4325085| Length = 7246 bp| Definiti...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0877300|
 
GeneName = Os01g0877300|

Revision as of 19:03, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0877300

Description

Mitotic checkpoint family protein

Version

NM_001051508.1 GI:115441386 GeneID:4325085

Length

7246 bp

Definition

Oryza sativa Japonica Group Os01g0877300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:39820294..39827539

Sequence Coding Region

39820390..39820587,39820926..39821025,39821318..39821478,39821754..39821951,39822030..39822122
,39822320..39822442,39823225..39823472,39823592..39823763,39823995..39824081
,39824171..39824374,39825003..39825165,39825427..39825514,39825598..39825667
,39826154..39826282,39826361..39826399,39826910..39826999

Expression

GEO Profiles:Os01g0877300

Genome Context

<gbrowseImage1> name=NC_008394:39820294..39827539 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:39820294..39827539 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgattctccggactccaccgcagcggaagcggcgggcggactccgacgtcgacgccgccgccgccaccgccaccacccggagccccgtttccgaccgccgcctcgtgctctacgaccggcccaccgccctcgtacccgctggcgtccccggggagcccatggatgacatggtctgcacgtaccactgccgtcagatggtgaaatcagaatttatggtggcattggacactgcagagaagcaagttcaggagtatcgagccacacttgatgatatggaggaacgattatccaagagtgaggatgagagggcaacatgccaggacaaactgaattatgtcgagcaagaattggcagcaacaaaaggtcgggaaagtgcaatgcaagagcgattattaaaggaggtgggtgactttcaggaacgctactgtgatcaaatcaagaagataggggaacttgagacgcagctgaaaaaagagattgattctcgaattgctgctgaatcatcgtcagcatccgcaaaggagtcagtcaaggagttggaggggaatttgcagcgtttatctgaaaattcagaaagggagaagaaagcccttaagaagaagctttcatacttgcaagacgacacaaaattatccatttctaaactaaatgcggagcttgaaagaatgagactcagggcgctaaactctgaggacgaagcaaagttgctgaatgaacagttggaggacttaaaaaagcaactagatgagagtgttcgtgaaaataatgagatggagcacaggctattgaattgcagttctttatcttatgaacgtactccatcagacgatcagaagttgataaagcttttgcaagaggagctccggaattatgaaaaagaagttgatgaagctagaaggttgaagtcttcccacacaaatgttgagttacttaaagaaaaaatattggaggaacaggggtgcagggagagagcagaaatggaattatctaagctgcaggaaattgaagctaaagcacagaagttggagcttgaattagcatcatgcacagcattgctcagcaacatacctgatgtatcttcttttggtgatatacctcaaaagatcgcagatttgcagaagcaagcattgacaaatttaaataaagttggtgaggtaacatcacagttgaaagaattaaaggttgcattggaatttgctgatcttagcaagcaacgggcagaaggtgaagcaacccttgccaaagagagggctgaaagtgctactagggagatcaagcggcttgaacttctgcttgctgccatcagtgaagaaagggatagattaagaaaggaccatgctgtgtcgaaatctagggatggagatgatgcatcatccaagaatatggaatcggatctatctcgaatggaaaaggtagtaacagaactggagagcactatacgtgaccagagagaactaattagtcaacagcacactgagctcaatttgatgaatgaaaaattgagcattgaatcaagaaaagcaaaatcattggagcgagatggagatcaactacgctcacaggtggctttacttgagtcaaagctgggccatggagattactctgcctctagcacaaaagtactgcgtatggtaaatactcttgcagtggacaatgaagcaaagcagactatagaggcattgcaagctgaattgaagaaaacgaaagagaggctacaagcagttgaagaactaaaaggacaagctgatgttggaactgtggttgatgtgaatattgctgaaaagctagcacagcttaaaaatcaaattgcaaccctagagaaacgtgaagaaagatataaggcagtatttgcagagaggatctcagttttccgaaaggcttgctgctcgctctttggttataagatagtgatgaatgatcagcaacagtcaaatgggatccctgtaacacgttttattctgcattctgtttacgcccaaagtgatgatgagaagcttgagtttgactacgaatctggaagcaccaatattgtggtcaatgactacacttctcaacatgaaattgctcagcaggtagatattttcatacgaaagatgaattctatcccggccttcacagctaacctgacaatggaatccttcaacaaaagaagtatctgttga</cdnaseq>

Protein Sequence

<aaseq>MILRTPPQRKRRADSDVDAAAATATTRSPVSDRRLVLYDRPTAL VPAGVPGEPMDDMVCTYHCRQMVKSEFMVALDTAEKQVQEYRATLDDMEERLSKSEDE RATCQDKLNYVEQELAATKGRESAMQERLLKEVGDFQERYCDQIKKIGELETQLKKEI DSRIAAESSSASAKESVKELEGNLQRLSENSEREKKALKKKLSYLQDDTKLSISKLNA ELERMRLRALNSEDEAKLLNEQLEDLKKQLDESVRENNEMEHRLLNCSSLSYERTPSD DQKLIKLLQEELRNYEKEVDEARRLKSSHTNVELLKEKILEEQGCRERAEMELSKLQE IEAKAQKLELELASCTALLSNIPDVSSFGDIPQKIADLQKQALTNLNKVGEVTSQLKE LKVALEFADLSKQRAEGEATLAKERAESATREIKRLELLLAAISEERDRLRKDHAVSK SRDGDDASSKNMESDLSRMEKVVTELESTIRDQRELISQQHTELNLMNEKLSIESRKA KSLERDGDQLRSQVALLESKLGHGDYSASSTKVLRMVNTLAVDNEAKQTIEALQAELK KTKERLQAVEELKGQADVGTVVDVNIAEKLAQLKNQIATLEKREERYKAVFAERISVF RKACCSLFGYKIVMNDQQQSNGIPVTRFILHSVYAQSDDEKLEFDYESGSTNIVVNDY TSQHEIAQQVDIFIRKMNSIPAFTANLTMESFNKRSIC</aaseq>

Gene Sequence

<dnaseqindica>97..294#633..732#1025..1185#1461..1658#1737..1829#2027..2149#2932..3179#3299..3470#3702..3788#3878..4081#4710..4872#5134..5221#5305..5374#5861..5989#6068..6106#6617..6706#tcaccttccccaatctccctgcggtagaaccctagaggaaccttctagaacccccgagccccccccccccccgcggcccccggcgaagccagcgagatgattctccggactccaccgcagcggaagcggcgggcggactccgacgtcgacgccgccgccgccaccgccaccacccggagccccgtttccgaccgccgcctcgtgctctacgaccggcccaccgccctcgtacccgctggcgtccccggggagcccatggatgacatggtctgcacgtaccactgccgtcagatggtgagatcgcttcgcccctatcttctactgctattgttgtcttagcccaatggtcggtggaagcatagcgtgtctagtaatttcggtgttactccagcctcgagctcccatttagctccaggtagtctcatatttgatatgcttagctcagttgattccacgcatgccacatcaaaaatgtagacaattatcgattgattgatcaatttgtaaggaaatagatggcgtggagcgaataattgtgtgtggctgttgcagtaagcgttattacatgccagtgtaccatattgatatatacatactggtgtgttcttttttcttgtatgtaattctcgtaggtgaaatcagaatttatggtggcattggacactgcagagaagcaagttcaggagtatcgagccacacttgatgatatggaggaacgattatccaagagtggtatgctgttcttttttcgcatgtgtaccttcttaagttcgatttgctatatccgttggtcaagatacatttatgtatcacttgaagcatgcacggagtttgggcctaccttcttcctagttgtgtttagtttgatttgccgggcgcagaaagtaggaaggacacgtagtattgaatcagattcactgctctaagcaatctactgttagaaataggtgttagcttattacattcgaagcaattgcatgcacatacttaaaggtaatcaataaacatttttttactgcttcagaggatgagagggcaacatgccaggacaaactgaattatgtcgagcaagaattggcagcaacaaaaggtcgggaaagtgcaatgcaagagcgattattaaaggaggtgggtgactttcaggaacgctactgtgatcaaatcaagaagataggggaacttgaggtatgcaaatctcctttggcacatgacctccatcccgtcacatagctggtgacttgcctttaatgtacaccccccatttcttttggttagttccttctgcaccactgaatatttgcaaaaggcctcattaactccctaataaagtgggtctggacgtacacacccactgggacattggcttgacacataagtgatgaggcaaacattcagctcctttttttaatcgtatatctgctcatctattggcatgactaatgaagatcttggtgctgcagacgcagctgaaaaaagagattgattctcgaattgctgctgaatcatcgtcagcatccgcaaaggagtcagtcaaggagttggaggggaatttgcagcgtttatctgaaaattcagaaagggagaagaaagcccttaagaagaagctttcatacttgcaagacgacacaaaattatccatttctaaactaaatgcggaggtctgtattgttgaactcttgtgcataatgatttattactagatattggcttatctgtttgaaaatgtctgatgatagcttgaaagaatgagactcagggcgctaaactctgaggacgaagcaaagttgctgaatgaacagttggaggacttaaaaaagcaactagatgaggtcagcttatctctaatttgcatgcttgtcagctcatattttaatttgcatgcttatttttgtctagcaatatttctaatctttccctgctaagaataggctatctcattagatcatctttctcatctattttactatttgtttgatatttttgttcaacatctatattgatttaatttgtttctggtccttgccagagtgttcgtgaaaataatgagatggagcacaggctattgaattgcagttctttatcttatgaacgtactccatcagacgatcagaagttgataaagcttttgcaagaggagctccggaattatgtgagcattataaatttgatatctcccagataggttcatagctgattctatctgactggttatttttcttgcttctttcatgcacttgtacaaactacaaaatgcttctttggatacacgtggctaaacagcgaaataccagctattgatgactggcagaatcttatgtaactaatcagtgtcttgccgatataagccttacatcgttattaccattacctgcttagtattattagatagcatagggccttcccattcatagtgcagggtaataacactgacagaatgtgtcatattaaagttctgcccacccacccccccctcgccccccgataccgcaacattattagcagtgactagttttttttcctcgagaacagcacttgctagtaattactgatgcaaaatttatgttttagttccaagggagttgtttttctatggccagctaccataaatgtagaatgttcaagctgtattgaaagctctaatcttcgcacaagtgcgctaggctgcttgttcttatattcttcttcttggattctagatacaatgctttcctgtagctgtcttaaaattggatattgtacaagtgctgcttaacttcgttcatcaagggaccctttctccatgcaatgcacttagttacccccttcccctccattcttcagctttaggcatatctgaagttttatttcttacctgtcattatattaggttgtctgaaatgaactattgtccaaaatgaatgcatttttacctgtatggttctgtgcatttaggaaaaagaagttgatgaagctagaaggttgaagtcttcccacacaaatgttgagttacttaaagaaaaaatattggaggaacaggggtgcagggagagagcagaaatggaattatctaagctgcaggaaattgaagctaaagcacagaagttggagcttgaattagcatcatgcacagcattgctcagcaacatacctgatgtatcttcttttggtgatatacctcaaaagatcgcagatttgcagaagtgcgtgtccattgttacaatttcaatttcatttgtctgctataggcgagcgctatcaattatctgtgcttctttctttctttatgtaaggtttatatggttattttgatttttaacaggcaagcattgacaaatttaaataaagttggtgaggtaacatcacagttgaaagaattaaaggttgcattggaatttgctgatcttagcaagcaacgggcagaaggtgaagcaacccttgccaaagagagggctgaaagtgctactagggagatcaagcggcttgaacttctggtactgttgtttattgctatttttataattactactgtgatgctagtttctactccccccctcagtgcaatgcaattctgtagatccacttgtggcaccatagcaagttcataatctgttcatgcaacgataactcttcctctgtacattctgtaattacattgataacttgttctttcataccccatgatttcatgctgtcattccatttgctgtttgttttctgaacagcttgctgccatcagtgaagaaagggatagattaagaaaggaccatgctgtgtcgaaatctagggatggagatgatgcatcatccaaggtttgtgatttttttaataaaattgacagttttgtgcctttatcattcttaatggaatgcacaatatttcttgtgaggtgacaatccagaatatggaatcggatctatctcgaatggaaaaggtagtaacagaactggagagcactatacgtgaccagagagaactaattagtcaacagcacactgagctcaatttgatgaatgaaaaattgagcattgaatcaagaaaagcaaaatcattggagcgagatggagatcaactacgctcacaggtggctttacttgagtcaaaggtaagggttaagatgaactattgaaatggtatctacatatgctcattctgttgtttagagtagtttcatttcgaaaaggcacccttacatctcatgtttatcatggtcccattttcttcatattgcttatatctgtctggaacatcataagtttggattaattgttccagtccgggcaacctttatttatttgtttatttgtaagcaaactatcaagaatttggctccatttatagagtgtactgagaaatgaagctttattccttttagtaaggtagcatgtctatctatcttctctcatgagctggtgtgaggctgtgaggtactggacagggatgcttctcctgcttctgtgagaaagcatgattgggaccattattttttttcagcttcaaatgaagcttggctgaatgtttttgtgcttaatttctgttgtgtttgttgtatgttgagagttaccgtttgctgctggtgcagtgatatattgttggagtctcaagtgaatgaatcttcttttttcaatagagttgtttttcacagttgtcagaaatgccactgtaaacaatactaacttagctgttgattaaaaccatgtttgtaccttgaatgttcttgttatgtttgacagctgggccatggagattactctgcctctagcacaaaagtactgcgtatggtaaatactcttgcagtggacaatgaagcaaagcagactatagaggcattgcaagctgaattgaagaaaacgaaagagaggctacaagcagttgaagaactaaaaggacaagctggtgagtggttttattcatcttttcgtccttgtgacagtgtccacattttttgttggaaccgtgtgatagagttactacctaaaggattgtaggctgtagcattcattaatcagttgtcacctactcagtttttttaattattcaacaatatctgataactcttttttttctagtcattgctccatagtctagcaagatgtgagaatcctcagatcttcaacgcttcatcaaactttaaatagaatatttattttactgcagatgttggaactgtggttgatgtgaatattgctgaaaagctagcacagcttaaaaatcaaattgcaaccctagagaaacgtgaagaaaggtacccactttgttatctgtatgttataagcttctgttcatactgatttgttagaaaatgaccttacagtttgtttgaaacagatataaggcagtatttgcagagaggatctcagttttccgaaaggcttgctgctcgctctttggttataaggtattattaatatgacacaacccatattacacagtggatcaaccctatctatctattactgctatttgtgcattctccacctctttttttttagagatgagggattcatgttagcatcttgcgaatcttacatagtgaatctgtatgcattagtatgccaagtcagtgttttgggatttcatccaatgtgaacctcttgaacccaaattaaaattgactctcgatcctggtgtttgaagctaaggatgaaagagtacatcagtatttgtgttgtggagtgtggacatggttagtttgatacttctcaatcatgctgtcttttggtttgaaaattttgattgccttcgattgttgcattggtcatgcctatttcagataaccgtgctcatcattttctagcttcaacatttcgtttgattttttctcatgcctttatgtttgatgtcaatactatttgacgtaaccttttcaattttatggttttagatagtgatgaatgatcagcaacagtcaaatgggatccctgtaacacgttttattctgcattctgtttacgcccaaagtgatgatgagaagcttgagtttgactacgaatctggaagcaccaatattgtggtaggattattaccttgctgaaattatcattcctataatttaacagggcattatttgatgttattaatgtatatacaggtcaatgactacacttctcaacatgaaattgctcagcaggtattcagcgtattggttgcatttgactgtatttcttttttctgatgcatggatgaaataactaaaaagtaatgttacagatgtgtataggaggaaagtgtggaaacatcgttatttattcttgtctaatatgactatttatttatgtcctctagttttgcatctaggttgtatgctgcacaaatgaatagtctggttggtgtcttagtgaattgcgttaggatgcaatagataaatcccagtggctagataggtgtacatttacttaacacatcacatttcatttaaggcatatctcttggggtgctcaggaaccagcaaccaagatgtttctaatgagaatgctgtacacattttctagacatcagattgtttgaagttggaacaaacatttgatctggacacccataccatgatggtcttacaacagcaaattacagaactgtttttaaatcttgtgttgggccacttggttttactgcttctgatgatgcaactatacattttcaggtagatattttcatacgaaagatgaattctatcccggccttcacagctaacctgacaatggaatccttcaacaaaagaagtatctgttgaagataaaagttcagtgagaattcatattgttggattttgtgagtatgctttcttcgagtcaccgaagattggaaaatgtatttcattttggaaacactctgggctcatgtctttccgatgcattatcacagcttctcgtagtaactggagatgtccaaattgttatgttgtggcagccctggaccgtggtcgagcaagctcctagatatagcaaggttccccccaccctttttcatatatactaaggtgcaattgatataccttgtggttttttatatgttttaacgatttgttcaaatgtcaaaagctgaggagcacggcgtgttactaattggacatgagtagagagttgatgccgggctgtcacatactcacatggattcacctctgttatgatttttgacaaagtatatatgaatgcgagcgttacttgtactgtggcctggactgaagcatgagcttttgtaaactgtagcgaactatcatatgtaactgagccatgtgaattgttaattaccgcaaaccagaattggttttctt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0877300, RefSeq:Os01g0877300