Difference between revisions of "Os01g0896500"

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(Created page with "{{JaponicaGene| GeneName = Os01g0896500| Description = Rhodanese-like domain containing protein| Version = NM_001051616.1 GI:115441602 GeneID:4325097| Length = 4672 bp| D...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0896500|
 
GeneName = Os01g0896500|

Revision as of 19:03, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0896500

Description

Rhodanese-like domain containing protein

Version

NM_001051616.1 GI:115441602 GeneID:4325097

Length

4672 bp

Definition

Oryza sativa Japonica Group Os01g0896500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40717306..40721977

Sequence Coding Region

40717541..40717733,40717898..40717956,40718129..40718175,40718852..40718882,40719095..40719157
,40719348..40719443,40719527..40719610,40719700..40719792,40720093..40720169
,40720501..40720616,40720696..40720796,40720891..40721709,40721804..40721896

Expression

GEO Profiles:Os01g0896500

Genome Context

<gbrowseImage1> name=NC_008394:40717306..40721977 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:40717306..40721977 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgctgccgctgccgctgacaccccgcccgcccgccgccatgctgctccccgtctgctccgccgcgcccacctgctccccgctctgcccggtgacgtcgtcggtggcccatgtcgtcggcgcgccggcgctacgagggagggtggtggaggtgagcgcgctcaggtcctacgccgatccgctcgtggcgcggccggtgcccgaccgcccgctgctcgcggactcatccatcctctccccctactccgcgtcacccgacgacatcgtgcggggcctcgccgccgcggaggtgcccagcgccgacgccaccgcagcaggtgacgcgctctgctgcggcggggtcgagccggcgacgctgacggccgtctccgacctcgccgccaccacggccgacgcggccgtcaccgacgccgcggagcgcgccctgcttgacgcgccggtgcccaccacgttcccggccgacgcgtccgacgccgaggccgccttcgcgaggctcatcgactccctcgggaagaagatcttccaggcggaggacgcgctcaccgaggggtacgacaagctgcggctgtcggcgtaccagtcgctcagcgcctggaggaagtccgtcgacggcgcggttggtggcctcacggcgtcggtggacgccaccaagaagcaggccgccggtggggtgacggacgcctccggcgcgttgcaggacaaggtggccggagctggcaccgtcgccgtcgatgtccttaggaaggctattgttgctgccgaggattcactgggcagcgcagcaacatccattggatattactatggatcaaccaagtcgtcgttgccaccgaatgtgaaagatttgctgaactcctccgaggagaaagctagtctagttctgaaaccgattggaggtgcccttcaacaggtatatgtagtcgtcgaaggtattgaaaagaatgttggtttggacccaagtgatcctattgttcaattggcagttctgcttggaggttcaaccacaatcgggttaacttactggctcttcgcatacggtggctattccggagacttgtcacccgaatccacactagagctgttgagaaatgatgacaaagccgtacttattgatgttcggtctgaggacttgagagtgaaagatggaattccggatctacgccgtgcagctagatctaaatatgcaactgctgcttcacctgagattaaaggttcagtaaagaggctacttaaaagtggaagagatgttgatgatgcgttgctcgcagttatcatccgcaacttgaagttggtcaaaggtgattcaaaggttataattatggatgctaatgggagccgatcaaaggccattgctaggttactgaagaagcttggtgtgcagcgaccttaccttgttaaaggtggtttccaatcttgggcaaagaaccttcgagtgaaagaattgaaacctgagaccgcattaacagtaataaatgaggacgcagaggaaatccttgaagacataaagcccactccaacacttgtccttggatctctcctgggcctctcagcagcagcgtacgctttgctagaatgggaaacgactctgcaatacataggtgttctaagccttggtctgactatctatctgcgattctctacgtacgagggttcagaggatctggagcaagatctaaaactgctgctttccccgttaagagtaggcgcggaggcgttctcgtgggcggccaagaagctggagccaagcaagattggcttggcgacttccccctccacgacggcggtccaagaccgggttctccaggccgccgcgaagcacgagtcgcagccgtctgacgccgaggcagacagtttggtctctgaagcgtga</cdnaseq>

Protein Sequence

<aaseq>MPLPLPLTPRPPAAMLLPVCSAAPTCSPLCPVTSSVAHVVGAPA LRGRVVEVSALRSYADPLVARPVPDRPLLADSSILSPYSASPDDIVRGLAAAEVPSAD ATAAGDALCCGGVEPATLTAVSDLAATTADAAVTDAAERALLDAPVPTTFPADASDAE AAFARLIDSLGKKIFQAEDALTEGYDKLRLSAYQSLSAWRKSVDGAVGGLTASVDATK KQAAGGVTDASGALQDKVAGAGTVAVDVLRKAIVAAEDSLGSAATSIGYYYGSTKSSL PPNVKDLLNSSEEKASLVLKPIGGALQQVYVVVEGIEKNVGLDPSDPIVQLAVLLGGS TTIGLTYWLFAYGGYSGDLSPESTLELLRNDDKAVLIDVRSEDLRVKDGIPDLRRAAR SKYATAASPEIKGSVKRLLKSGRDVDDALLAVIIRNLKLVKGDSKVIIMDANGSRSKA IARLLKKLGVQRPYLVKGGFQSWAKNLRVKELKPETALTVINEDAEEILEDIKPTPTL VLGSLLGLSAAAYALLEWETTLQYIGVLSLGLTIYLRFSTYEGSEDLEQDLKLLLSPL RVGAEAFSWAAKKLEPSKIGLATSPSTTAVQDRVLQAAAKHESQPSDAEADSLVSEA</aaseq>

Gene Sequence

<dnaseqindica>4245..4437#4022..4080#3803..3849#3096..3126#2821..2883#2535..2630#2368..2451#2186..2278#1809..1885#1362..1477#1182..1282#269..1087#82..174#gccacgccacgcctcgccgcgccgcgccgcgacgacacgcgccaaccaaacgggtggcaggcaggcagcagcgagctgctgatgccgctgccgctgccgctgacaccccgcccgcccgccgccatgctgctccccgtctgctccgccgcgcccacctgctccccgctctgcccggtacggaacaaaccaccaccgcgcgccgcctccgccgccgccgccgttgtcgttctggtagtcgctaatgcttctgtttggttggctttggcaggtgacgtcgtcggtggcccatgtcgtcggcgcgccggcgctacgagggagggtggtggaggtgagcgcgctcaggtcctacgccgatccgctcgtggcgcggccggtgcccgaccgcccgctgctcgcggactcatccatcctctccccctactccgcgtcacccgacgacatcgtgcggggcctcgccgccgcggaggtgcccagcgccgacgccaccgcagcaggtgacgcgctctgctgcggcggggtcgagccggcgacgctgacggccgtctccgacctcgccgccaccacggccgacgcggccgtcaccgacgccgcggagcgcgccctgcttgacgcgccggtgcccaccacgttcccggccgacgcgtccgacgccgaggccgccttcgcgaggctcatcgactccctcgggaagaagatcttccaggcggaggacgcgctcaccgaggggtacgacaagctgcggctgtcggcgtaccagtcgctcagcgcctggaggaagtccgtcgacggcgcggttggtggcctcacggcgtcggtggacgccaccaagaagcaggccgccggtggggtgacggacgcctccggcgcgttgcaggacaaggtggccggagctggcaccgtcgccgtcgatgtccttaggaaggctattgttgctgccgaggattcactgggcagcgcagcaacatccattggatattactatggatcaaccaagtcgtcgttgccaccgaatgtgaaagatttgctgaactcctccgaggagaaagctagtctagttctgaaaccgattggaggtgcccttcaacaggtaaatcagtggcaagaattcagctcttgttcttggtatgccagttagcattttactgaaattgctcaatctgttgttgcctgctatgattcaggtatatgtagtcgtcgaaggtattgaaaagaatgttggtttggacccaagtgatcctattgttcaattggcagttctgcttggaggttcaaccacaatcgggtaaatgagattttctctttgccatttatagctgacatgttcataccaaatcttcttcttaatccctgctatgttgcaggttaacttactggctcttcgcatacggtggctattccggagacttgtcacccgaatccacactagagctgttgagaaatgatgacaaagccgtacttattgatgttcggtctgaggcaagagattgtaaatctcactggcctattctttctttgatgtccgttttcatcttttatatccggtccatgatatattctgcaaaccgtagaaaagataatattgtttgttagccacctacatgcctttgccaatgtagaacagtttgttcctgccaagccattcagtacaaacatttttagtactgtagcactacaactctttgatgcgtttcctctagagcatgagaatataagcttacatgcagatgtacctgaacttcaagtgtttgattcatcattagtatttcaaaagcaactgtaacagcttatcatggaatcctttttgtaggacttgagagtgaaagatggaattccggatctacgccgtgcagctagatctaaatatgcaactgctgcttcacctgaggtgtgtctttgtttgaacttggagatctgaagtgctaccagccattgattgctggacagtttatatgtctacttaacctgaactcagttccaattttttatgtatatccgtgaggattgaagtgtatgcaatgagttctttttgttggaataatgttaggagttgttttcattctagaaaaagaaaactgagaagtaaacttatgcaactctagcagcagtcagccatttcaatttcaaacgggtgagagtacaaaactgattttgcttactgatattaagttcacatatttttctttagattaaaggttcagtaaagaggctacttaaaagtggaagagatgttgatgatgcgttgctcgcagttatcatccgcaacttgaagttggtcaaagtatgatgtttgcctgaacttggatttgatatcttcagtctaagatttcttcaaaataagtgaagtatgttttcaatcttcttttatagggtgattcaaaggttataattatggatgctaatgggagccgatcaaaggccattgctaggttactgaagaagcttggtgtgcaggtaagttccaatgcagtttctcccaaaaatatttcattttcactgatccgagtcctgcctaaatttgactgttttgatggcagcgaccttaccttgttaaaggtggtttccaatcttgggcaaagaaccttcgagtgaaagaattgaaacctgagaccgcattaacagtaataaatgaggtaaaaattcagacaaaaacctcatgtttgaatgaaaagaagcgtataaggttttggtcacaatttttctttgttcctttccaaaaatttgtatgtatcagcgttgaatactacgtagaggtagcactttttgttatcactatgtactattaacgtcgaaaactcacaatattgttttgaatgtatgcaggacgcagaggaaatccttgaagacataaagcccactccaacacttgtccttggatctctcctggtacataaacatcaattggtctccttttactttcttttgcctctgttggcagtcggcacactgtcctgtttctctttgattattggttccattatatttttttaagaatggttcttttaaaagttgtactgaatcacgacatttctccctttgtgcatttgaagccttacgtgcaatatttcttcctttctaaatttggttcttttgtgcagggcctctcagcagcagcgtacgctttgctaggtaagaggggtaggaaagcattaagtgtggttattgcattgctttgctatacattaaatatattgcaagtcatatgattttcagaacagtatgttctcttgtcagagataagggctctttcatattctctctcttttttattttgtcctgctctttggagctcctaatggtctataggattcacagttatgcaaaaagaggacaggtttttaatctctctcttttttttgggcgggctggccgaaggaggccgagtaatttcattaagatttggaagagtacaagttacagaaaaacagcaacagaacgctgttgaaaatagtaaatttttaatctcagtgtcagtttatcaacagaaagcgatgctgcattcacaagtatgatattttagggaatttgagaaggcatttcttagtggagtgtttgcaggtcgctttaaacaccattttgaataattcataccctgggaagcttactggattactaggagtcatgattgtttttatttgtcattttacctaaatgtgcataattgatctttttgactggatgcccatcatgggtatgtgctattgaacttttataacctagttaggaaaagcagctataattcaaccgtttcaaacttgtattcattttgaatatgcgattaattgatattgataaacaactgcagaatgggaaacgactctgcaatacataggtgttctaagccttggtctggtaagtattttccattttcaaactgtcggtacatatcatatattcttctgttcaattgcctggaaagtaaagcaatacagctttgtgccttttatattactactcactccgatccaaatatcatggcaagcggaaacaacacagtttacatgacattcttctactcttgtagactatctatctgcgattctctacgtacgagggttcagaggatctggagcaagatctaaagtaagtcatcctagtatcatccgttctcgtggtgtgcttcttttctgtagtacaaatttacagctcaggtgctcgaaacctgccatttttccaacacatgacaaaaaaaaaaaaccattgcaaatttacaagttccccttactcctctccttgtgattgcctagactgctgctttccccgttaagagtaggcgcggaggcgttctcgtgggcggccaagaagctggagccaagcaagattggcttggcgacttccccctccacgacggcggtccaagaccgggttctccaggccgccgcgaagcacgagtcgcagccgtctgacgccgaggcagacagtttggtctctgaagcgtgagagtttcaggtttcagtggccaatgtgatcccaatctgtgcagctgagtgaaagtcgttagccagtagctacacgcccagtaaattctgtggaaaaatttgatgttttctcatgtagttgattgatctgagctactgtgagcagccgtggtgatgaaccggcactgtaaatttttataagcagcgttcaacaataatgaacacatgttagcacaagatgatgttaatgttgtttc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0896500, RefSeq:Os01g0896500