Difference between revisions of "Os01g0928100"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os01g0928100| Description = Conserved hypothetical protein| Version = NM_001051808.1 GI:115441986 GeneID:4326960| Length = 7123 bp| Definition ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0928100|
 
GeneName = Os01g0928100|

Revision as of 19:05, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0928100

Description

Conserved hypothetical protein

Version

NM_001051808.1 GI:115441986 GeneID:4326960

Length

7123 bp

Definition

Oryza sativa Japonica Group Os01g0928100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42518232..42525354

Sequence Coding Region

42518641..42518747,42519563..42519689,42519767..42519807,42519940..42519981,42520109..42520178
,42520558..42520678,42520767..42520884,42521535..42521595,42521670..42521780
,42521875..42521949,42522303..42522330,42522417..42522466,42522716..42522778
,42522873..42522914,42523050..42523119,42524345..42524529,42524862..42525263

Expression

GEO Profiles:Os01g0928100

Genome Context

<gbrowseImage1> name=NC_008394:42518232..42525354 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:42518232..42525354 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaccgcctccgcgcggggagccccgtctacgggcggcagcggagcggcagcagcacgggctcctcctccccgggcggcgtctccccgtcccaccaccgctcctcctccacctcctccgccgcctccgccgccgcggggctgggcggcggcgtctccaacgtgcgccgcacgcagaacgtcgcggcgcgggcggccgccgcgaggctggcccaggtcatggcgtcacagagcgccgcggccgccgcgggccgcgacgacgacgacgacgacgacgactacgccaatgaccacccgcccgcccctccccccgcgaggttcggctccgcgcgccccgccgcggcgcacggcagcaacggcgtctcgttgctcggccgcaccgcgagatctccctcccctgcgttaggtaggaacattgtagagccacctcctactgtccgctcaacatcagctgggaggcctgccgttgcttcacggccgaccaccacggtggttccaccgatcaaaaccagcacgacattgcggacaccatcgcctattccacctgtggctgtggagcctccagtggaccgcagtcggcagaaaaggtttgatacagggcatctcaactccagagaatcaacaccaaaaagggaggcgtctgcacttcaagatgagcttgatatactacaagaggagaatgagagtgttctagaaaagctacgacttgctgaagaaagatgtgaagaagcagaagctagagccaaggagcttgagaaacaggtagctgcccttggggaaggggtatcattagaagctcgcctcttgagcaggaaagaagctgcccttaaacagagggaggctgcactgaaggctgcaagggaatcaaaagatggtaaagatggggaagtgacaacactaaagcatgaactggattgtgccaaagaagaggttgtaacagctatggagcagctaaaggaagcagagactgaaacaaaggccctccggtccatgactcagagaatgatcttaacccaagaggaaatggaagaggtggtccttaaaaggtgctggctttcacgttattggggcttagcggttcaatacggagtttatcccgagattgcggtatcaaagcatgaacattggtcatcattagctcctcttccccttgaggttgttctctctgctggtcaaaaggctaaggaggaacctctcaaacaaggtgaggatgacgcccaaaggagaaataaacttgtgcgagatatgagtgatgtaatgggagaaggcaatatagagagcatgctctcagttgaaatggggcttagagagctttcatcattgaaggtggaagatgctgttgtggttgcacttggtcaacaccggagacctagtatagttcggcaattcacatcagattttaaatcacctggtgaacctaaattcttggaggcgtttgatcttagccatgaagaggcagaagatgttagctttaagcaggcatggcttatatacttctggagaagagctaaaactcatggcattgaggaagacattgctgaagaacggcttcagttctggattggtcgcaatgcagtagccccaacttctcatgatgctatagatgtggagcgaggtctaacagagctcaggaaactgggcatagagcagcaactgtgggaaggatcacgtgcagatatcgatgaagattcatcggcaattgagaatcactag</cdnaseq>

Protein Sequence

<aaseq>MDRLRAGSPVYGRQRSGSSTGSSSPGGVSPSHHRSSSTSSAASA AAGLGGGVSNVRRTQNVAARAAAARLAQVMASQSAAAAAGRDDDDDDDDYANDHPPAP PPARFGSARPAAAHGSNGVSLLGRTARSPSPALGRNIVEPPPTVRSTSAGRPAVASRP TTTVVPPIKTSTTLRTPSPIPPVAVEPPVDRSRQKRFDTGHLNSRESTPKREASALQD ELDILQEENESVLEKLRLAEERCEEAEARAKELEKQVAALGEGVSLEARLLSRKEAAL KQREAALKAARESKDGKDGEVTTLKHELDCAKEEVVTAMEQLKEAETETKALRSMTQR MILTQEEMEEVVLKRCWLSRYWGLAVQYGVYPEIAVSKHEHWSSLAPLPLEVVLSAGQ KAKEEPLKQGEDDAQRRNKLVRDMSDVMGEGNIESMLSVEMGLRELSSLKVEDAVVVA LGQHRRPSIVRQFTSDFKSPGEPKFLEAFDLSHEEAEDVSFKQAWLIYFWRRAKTHGI EEDIAEERLQFWIGRNAVAPTSHDAIDVERGLTELRKLGIEQQLWEGSRADIDEDSSA IENH</aaseq>

Gene Sequence

<dnaseqindica>6608..6714#5666..5792#5548..5588#5374..5415#5177..5246#4677..4797#4471..4588#3760..3820#3575..3685#3406..3480#3025..3052#2889..2938#2577..2639#2441..2482#2236..2305#826..1010#92..493#acctccttcccacttctcaacctcgcctcgccatctccgcgccgcggcccagatccctccggcgagcgccgccgccgccaccgcctccgccatggaccgcctccgcgcggggagccccgtctacgggcggcagcggagcggcagcagcacgggctcctcctccccgggcggcgtctccccgtcccaccaccgctcctcctccacctcctccgccgcctccgccgccgcggggctgggcggcggcgtctccaacgtgcgccgcacgcagaacgtcgcggcgcgggcggccgccgcgaggctggcccaggtcatggcgtcacagagcgccgcggccgccgcgggccgcgacgacgacgacgacgacgacgactacgccaatgaccacccgcccgcccctccccccgcgaggttcggctccgcgcgccccgccgcggcgcacggcagcaacggcgtctcgttgctcggccgcaccgcgagatctccctcccctgcggtaaattctgcttcccccggatctctcgctgatctcgctacccgctgcgtctcaacttaggatttcgatggtttgaactgtcgcggtgcacgaatgagtcatagttggtcaatcggaagtcaaattggttctgaagcatgcttgagcagatgaatttgctagtgaagctagtttacatctcgccaatgtcagtccaattctatagcgatgccttctgaattgtaaaaattgggagaagtgatgaatgcattgggacttctggctgcttcgtgatttgatcaccgcttatcctgtgcccttctgctaatttgatctcctcatgttttcattagttaggtaggaacattgtagagccacctcctactgtccgctcaacatcagctgggaggcctgccgttgcttcacggccgaccaccacggtggttccaccgatcaaaaccagcacgacattgcggacaccatcgcctattccacctgtggctgtggagcctccagtggaccgcagtcggcagaaaaggtacgtcaatgacattccccagatctgttgcatggtctgcagcattctctgtgttttctatacttaaaatagcattccttaagttctacttctcttaggatatattaaaatgaatgcatggttaattgtactagcaaccccaccaaatcgagcagaaatgagttatttttactgcttgcgctgtttttcagaagaagtgatgttggtagttcacaacattaactaaactgctcttgataaagggatgtatttggttggtggcgttgttagtaaaaaaagatgcattgatatcataaggttgaaccaacagccctatgccaaactatgtgttcagttttggtcggtatagtggagagccctcttatcttgggcgtaatggattgaaaagttttgagttcaataatacatgcttattaaggatgggtagtaaattattatgcgtccgaaatcttaatcgcttacctaaattgtgaaatctgatatttgattgaatcaattggtcagcatcttggggttgtgggtgtgcctcttggccagtttcctattaccgcgctttgctgaactgcgccgcagaatctatcaaattatacataatttttacctattctagcaaatgatttcttttattgtgctgaaaagggcattgctgactagttattaataataacaaaaaattcggccccaaggggaaagatctcccctgaggtatttcaattaagaagaagcacctgaaaccgaggccccagaaaggccacaaaagctggtcctcctacatggggagccgccccctatggatcgggccttaatccatgctttgaggctcttgccccctacacaaggacgatagatcaattcctaaccttgttttggtagaaccagcgagtgaccttttttggtgcaagaccaagatttgaaccctggtcgttagcttcccactggaaggtatttaccatcatgctacaagcacgtttacttgctgactagttaatatatctaggattagtaaaataaagtgccctttagtcgtccaccatgctaaacgcacccttttctcttttaagtatgttactaggggcaccacattgcttgttgcattaaagttttggaataatcacattatgaccatctggccacttcttatagcttgaatttctttttcccattttttcaaatgttcctaaaaataggcatcaggtaagttatttactttttttttttgcctcaggtttgatacagggcatctcaactccagagaatcaacaccaaaaagggaggcgtctgcacttcaagatgaggttttccttattctctataaactagttatacgtataatatattttagctcatggttctgtcacgaactttgacctagaactttttgaggagtgtttatcagatgtttttaagactaatgcaatgctgtcctacagcttgatatactacaagaggagaatgagagtgttctagaaaaggtgaaatagcaaccatagagctgttttataggcaatctagtacttgattttatactgatctttaacaaattattttctgaatcttgattgacagctacgacttgctgaagaaagatgtgaagaagcagaagctagagccaaggagcttgagaaacaggtgagataatcttatattaaacattgttttatctttttttttgtattatgataaattggacatgtgcactagacattgagtctatctctagttctcactacagtttttcttttggcgggaatttttcactacaatttaaacttgaatttgaattattggaacgaatattctcctttacttgaggaggtgttcattacactgagcattttgtatctttggttagctaaggttatatttgttgatatgcaggtagctgcccttggggaaggggtatcattagaagctcgcctcttgagcaggtttgcatcatgtttggatatgcatgtttcacaaattcagaactgatcatagactcataacctaacattgtcatgattattggcaggaaagaagctgcccttaaacagagggaggttagtttttcttcttgtgttttacctatggatagctggcatgccaatcttgtagtactgttttttttatcttagaatttatatgtaaaatttggaagtgttagaattttagtgtttttcttgttgtgaaaacaaaaggatgaaacattttggaatttcatttgatcttttttctgctttatttgtcttgaaatgcacatgcggtactatagtcatgctaggttcttattgtaaaaaaaaaatctgaacctgaaggatatgctggagtacataccttccaattttaccagaaaaataaagaggatatttcttacccatcaacgaacactttatataatgctttttgtctacaggctgcactgaaggctgcaagggaatcaaaagatggtaaagatggggaagtgacaacactaaagcatgaactggatgtaaatatacttcctaccaatcaaaatatggaagtagtgttggtttgtatatggtgttttatttgaccatgttttcttctcatgctttgaatagtgtgccaaagaagaggttgtaacagctatggagcagctaaaggaagcagagactgaaacaaaggccctccggtccatgactcagagaatgatcttaacccaagaggaaatggttagtctgatttcagtactcccattttttaattgcttgatatagattttgatctatttgcaaccttatgctaggaagaggtggtccttaaaaggtgctggctttcacgttattggggcttagcggttcaatacggtaagttgctaagagtatttctgtaagaaatgcttttagtgttatcttgtataagctgttctgtaatcatgctctctagacaaaataaaatcaaagcttatcatgtcaaaaggatgttagttatcatggtgaaacaaaagaaataaattatgttgcacatttgttatttgttgttctctgttgaaaggatgttagttatcatgtgattactttgtttggttaaatatcaatagtgtgagctagttgctggaaattggaaaggcaaacattttttttgtgacttatatgcaatttggtttattgcgtttacagaaatggttttcaacatagtttttgtttcgcagtttatctttagatgctgataattcacgttcacactagacctgagaatttggtctggtctgaatgcaagtttaaggctggtttggtctcagaaaatgaggccaatggccaaacagtccatactccatcctgactatgtatatggctaggtgtcacttagattagggcctagggggcctgaaagtaactagttgtgaccctggtctggtctcgaaaatgcttaattctagtttgcacatgatgttgaaatgtactgttaactttttccctgtccgtgatttatctgatggcccattaataacttgaaggagtttatcccgagattgcggtatcaaagcatgaacattggtcatcattagctcctcttccccttgaggttgttctctctgctggtcaaaaggctaaggaggaacctctcaaacaaggcatgtctgcatctttataatatacaagttgtagatcgtagtttgttccatgtactccagttaattattcttggatcttttcaagcaggtgaggatgacgcccaaaggagaaataaacttgtgcgagatatgagtgatgtaatgggagaaggcaatatagagagcatgctctcagttgaaatggggcttagagagctttcatcattgaaggtattccactgcccttttattggcagtggtttattaactttctgttctatagattctcagagatgaaattccagacacagtacttgtactcattctaatgcagagacgaacatttacagcaaaaatggcacaacagtaattcttctaatatcctctagagtttttttttatggagtgttctctgaaatacggaagtgtgaacagtatttgccaggctttaccttacttccactgtaatagagcactaagtaatcattctttttgtactgagtatatttgcatgtttggacaagtgacaaaccatatgtgctttataaatacaggtttttttttctaggcttccttatcacttctctcctcactagttattgttctgtaggtggaagatgctgttgtggttgcacttggtcaacaccggagacctagtatagttcggcaattcacatcaggtttgcacttcttttatcatttcatatcattcttgtttaacttacatgcgtaatatgatttcttcattggtgctgccttcactcataaaaaaaaactaagaaaggtataaattcttctcttatgcagattttaaatcacctggtgaacctaaattcttggaggcgtttggtaatggttcttccctttgtctaatagatttatgcaaaacttccactaacagcttgagcttgtgttgtatgtaaacatttcatcctgtttctatgagtttaaattaaatttgaactttttgacctattgcagatcttagccatgaagaggcagaagatgttagctttaagcaggtaaacctttcagcgatgtgaactatcaaattcatccatttattacgtgtgatttatggaatatatattgaatgcaggcatggcttatatacttctggagaagagctaaaactcatggcattgaggaagacattgctgaagaacggcttcagttctggattggtcgcaatgcagtagccccaacttctcatgatgctatagatggtaataagcaactttccttgttgaaaaaataacctagcattgggagttatccacctgttagttaatgatttatcgtactatttaaccatccaacgtccctgggatgtcttttatttgtgcagctcttttttgacagcatgccccaacagttgatcatgtgatgcttttgtagggatcaaaccaactttctatttcctccttttattatttcttcactgttgtattttatctctttgccctttactgtcctctttcccatctgtaatccaaagtacggtatagtggtacgaacattatggtcccgttcgtttctccaacaagagttggatgaagatttagattttcgtggcacacttttgaaaccgctaaacggtgcgtttcgtgcgaaaactttctatatggaagttgttttaaaatatcagattaatccatttttcaagtttgtaataattaaaactcatttaatcacacgttattaccacatcgttttgcgtgaaacacttaatctttatcttcatcttcatcttcaggagattcaaacaccacctatatgtgagatacttacatgaaccactattaatgtgattgatgtgtttttttttgtctaaacagttatgggatattgggggtatacagaaggcattttgagtatgccctcatatatattacatgttgcggtgtgcctataatctgttttgtttttccaattgtttttacctagatttacacacctcatccattttttctcctatccaagaatgccatcattttcagttttttgctttactgagcactgttagttttgttatctgcagtggagcgaggtctaacagagctcaggaaactgggcatagagcagcaactgtgggaaggatcacgtgcagatatcgatgaagattcatcggcaattgagaatcactaggcacatctcaaggttgtttatggtacatgattattccaattttggagaatggaaatgctttttcgcggctggtcttgggccattgccatcattggatccctgaatggtgctgcaatcttcgggtgttgagcaatgggcagtcttcgggtgttgagcgatattatgggcttgtccagagatattgtgtagtgcatgtgcgagccatttatcttttgtcgaaatatttttgtgaaatgtgtaattgttttgtcctggcaatatgatggtgatctcacttcatccaatttgtgaatttgtgattacaccacatgtgtactgcctgttattcagtaaaatatacagagaggaagctatgcttcctgcgacaaatgagcaaatcataagtgatgattctttctggtagtctgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0928100, RefSeq:Os01g0928100