Difference between revisions of "Os01g0940000"

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(Created page with "{{JaponicaGene| GeneName = Os01g0940000| Description = FAD linked oxidase, N-terminal domain containing protein| Version = NM_001051888.1 GI:115442146 GeneID:4326515| Leng...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0940000|
 
GeneName = Os01g0940000|

Revision as of 19:05, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0940000

Description

FAD linked oxidase, N-terminal domain containing protein

Version

NM_001051888.1 GI:115442146 GeneID:4326515

Length

2781 bp

Definition

Oryza sativa Japonica Group Os01g0940000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43095050..43097830

Sequence Coding Region

43095276..43095888,43096010..43096137,43096247..43096507,43096642..43096904,43096995..43097319

Expression

GEO Profiles:Os01g0940000

Genome Context

<gbrowseImage1> name=NC_008394:43095050..43097830 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:43095050..43097830 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcggggagccatgaagccgtcgatcgtgcactgcctcaagctgctcatgctgctggcgctcggcggggtcaccatgcacgtccccgacgaggacgacgtggtcgcgtcgctcggggcgctgcgcctcgacggccatttcagcttcgacgacgcccacgccgccgcccgggacttcggcaaccggtgcagcctcctgccggcggccgtgctccaccctggctcggtgtccgacgtcgccgccaccgtcaggcgcgtgttccagctgggcaggagctcgccgctcaccgtcgcggcgcgcgggcacggccactcgctcctcggccagtcccaggccgccggcgggatcgtcgtcaagatggagtccctcgccgccgccgcagccagggcggtgcgggtgcacggcggcgcgtcgccccacgtggacgccccgggcggcgagctctggatcaacgtgctgcatgagacgctcaagcacgggctggcgcccaggtcatggaccgactacctccatctcacagtcggtggcaccttgtcgaatgcgggggtcagcgggcaggcgttccggcatggaccgcaggtcagcaatgtcaaccaactggagattgtgacagggaggggagaagttgtcacctgctcgcacgaggtgaactctgatctcttctacgctgctcttggcggcctgggccagtttgggatcatcaccagggctcggattgctcttgaacctgctccaaagatggtgcggtggatacgtgttctctactcggactttgagaccttcaccgaggaccaggagaagctgatcgcgtctgagaagaccttcgactacatcgaagggtttgtgatcataaacaggacaggcatcctcaacaactggaggacgtcgttcaagccacaggacccagtgcaggcaagccagttccagtcggatggaagagtgctatactgccttgagctgacgatgaacttcaaccacgatgaggctgacatcatggaacaggaagttggtgcgctgctatctcgactcagatacatatcgtccactctattctacaccgatgtcacatacctggagttcttggacagggtgcacacttctgagctgaagctgagggctcaaggcctctgggaagtcccacacccgtggctgaatcttctgatcccaaggagcacagtccacaaatttgcaaaggaagtcttcggcaagatcctaaaagatagcaacaatggtcccatactgctttacccagtgaacagaaccaagtgggacaacagaacatcagtggtcataccagatgaagaaattttctacctggttgggttcctatcttcagcaccatcatcctcaggtcatggtagtgtcgaacatgcaatgaacctgaacaacaaaatagtggacttctgtgaaaagaatggtgttgggatgaaacagtatctagcaccctacactacacagaagcagtggaaagcccacttcggagcaaggtgggagacatttgaacggaggaaacacacgtacgatcccctagcaatcctagctccagggcagagaatatttccaaaggcatcactacctatgtccttgtga</cdnaseq>

Protein Sequence

<aaseq>MRGAMKPSIVHCLKLLMLLALGGVTMHVPDEDDVVASLGALRLD GHFSFDDAHAAARDFGNRCSLLPAAVLHPGSVSDVAATVRRVFQLGRSSPLTVAARGH GHSLLGQSQAAGGIVVKMESLAAAAARAVRVHGGASPHVDAPGGELWINVLHETLKHG LAPRSWTDYLHLTVGGTLSNAGVSGQAFRHGPQVSNVNQLEIVTGRGEVVTCSHEVNS DLFYAALGGLGQFGIITRARIALEPAPKMVRWIRVLYSDFETFTEDQEKLIASEKTFD YIEGFVIINRTGILNNWRTSFKPQDPVQASQFQSDGRVLYCLELTMNFNHDEADIMEQ EVGALLSRLRYISSTLFYTDVTYLEFLDRVHTSELKLRAQGLWEVPHPWLNLLIPRST VHKFAKEVFGKILKDSNNGPILLYPVNRTKWDNRTSVVIPDEEIFYLVGFLSSAPSSS GHGSVEHAMNLNNKIVDFCEKNGVGMKQYLAPYTTQKQWKAHFGARWETFERRKHTYD PLAILAPGQRIFPKASLPMSL</aaseq>

Gene Sequence

<dnaseqindica>227..839#961..1088#1198..1458#1593..1855#1946..2270#cctccccttacctaccttggtggcctcctctcgctctcgctctccttctcttcctgcacctgttgcacccccaacaactctcactcactgccagtgtcaagcaagattatacagcttggtctcatctcttaattccaagcttgtttcaccgacctgccaaactcgattgatccacagatagatagtacttctggttgggatcttgagcttatatagaccaggaagcatgcggggagccatgaagccgtcgatcgtgcactgcctcaagctgctcatgctgctggcgctcggcggggtcaccatgcacgtccccgacgaggacgacgtggtcgcgtcgctcggggcgctgcgcctcgacggccatttcagcttcgacgacgcccacgccgccgcccgggacttcggcaaccggtgcagcctcctgccggcggccgtgctccaccctggctcggtgtccgacgtcgccgccaccgtcaggcgcgtgttccagctgggcaggagctcgccgctcaccgtcgcggcgcgcgggcacggccactcgctcctcggccagtcccaggccgccggcgggatcgtcgtcaagatggagtccctcgccgccgccgcagccagggcggtgcgggtgcacggcggcgcgtcgccccacgtggacgccccgggcggcgagctctggatcaacgtgctgcatgagacgctcaagcacgggctggcgcccaggtcatggaccgactacctccatctcacagtcggtggcaccttgtcgaatgcgggggtcagcgggcaggcgttccggcatggaccgcaggtcagcaatgtcaaccaactggagattgtgacaggtctctgacaaacccgccacgcacgataaaaacatatacagccgctctaatactactactacaacaacagcataggaattagatgactaaatttgttcttgctatgaactaccaaatgcagggaggggagaagttgtcacctgctcgcacgaggtgaactctgatctcttctacgctgctcttggcggcctgggccagtttgggatcatcaccagggctcggattgctcttgaacctgctccaaagatggtaacatcaagcaatcaattttgtgtcaactcaatgatggaaaaactggccattatttgattcgtttcattggtgcatgttcacgtactaattagatatacaatgacaggtgcggtggatacgtgttctctactcggactttgagaccttcaccgaggaccaggagaagctgatcgcgtctgagaagaccttcgactacatcgaagggtttgtgatcataaacaggacaggcatcctcaacaactggaggacgtcgttcaagccacaggacccagtgcaggcaagccagttccagtcggatggaagagtgctatactgccttgagctgacgatgaacttcaaccacgatgaggctgacatcatggaacaggtgagctgagttaattattttctctttgcatcaagatgttgacgtatcaggaaatatatatataggatattagatagcccaggccgtgcaggtgttttttaattaatggttggtgtttgtatatgtatttacaggaagttggtgcgctgctatctcgactcagatacatatcgtccactctattctacaccgatgtcacatacctggagttcttggacagggtgcacacttctgagctgaagctgagggctcaaggcctctgggaagtcccacacccgtggctgaatcttctgatcccaaggagcacagtccacaaatttgcaaaggaagtcttcggcaagatcctaaaagatagcaacaatggtcccatactgctttacccagtgaacagaaccaagtaaatataactagccaaattgcagtcctatactatactatccagtttcaagttttggtaactaaaaaaagtttaacatggttgatgcaggtgggacaacagaacatcagtggtcataccagatgaagaaattttctacctggttgggttcctatcttcagcaccatcatcctcaggtcatggtagtgtcgaacatgcaatgaacctgaacaacaaaatagtggacttctgtgaaaagaatggtgttgggatgaaacagtatctagcaccctacactacacagaagcagtggaaagcccacttcggagcaaggtgggagacatttgaacggaggaaacacacgtacgatcccctagcaatcctagctccagggcagagaatatttccaaaggcatcactacctatgtccttgtgacagtatatgctgtgaaaaggcttttgtagagcatatgttgtacaaaaatgtagcgaaaatatcctttgtaaagacgaaatctacggaaggtagcttaaagaacacagcggggcaaccagtagactagaactcaagaagtagtggaagatacctcacaaaagacttcaaagcaaagcagcgtggccttaactctggttgcagctttggaggcaaatgattggaggattacagtggtcctagcaactgaagtccagctgttgttacagcatagagaagagctgtgctacctcaatgatcactaaatcactgactagtgtaactcatgttaagttgtttgtgttcagctaacaacactgcagaaggtagcatcagggtagacccttgattagcaaataacacagcctgttgcatgtgagtactatctgcataaatgcagcagattacattagtttttatgaatcgaatgttatgtttgcaaatgttaaagaaaaaaacagcaaagtttcttatt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0940000, RefSeq:Os01g0940000