Difference between revisions of "Os01g0951000"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os01g0951000| Description = The start codon is not identified.| Version = NM_001051945.1 GI:115442260 GeneID:4325772| Length = 6648 bp| Definit...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0951000|
 
GeneName = Os01g0951000|

Revision as of 19:05, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0951000

Description

The start codon is not identified.

Version

NM_001051945.1 GI:115442260 GeneID:4325772

Length

6648 bp

Definition

Oryza sativa Japonica Group Os01g0951000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43668797..43675444

Sequence Coding Region

43669177..43669251,43669377..43669643,43669765..43670210,43670433..43670521,43670767..43670856
,43671149..43671227,43671467..43671530,43672085..43672172,43672264..43672324
,43672394..43672453,43672579..43672676,43672763..43672834,43672957..43673039
,43673117..43673199,43673767..43673776

Expression

GEO Profiles:Os01g0951000

Genome Context

<gbrowseImage1> name=NC_008394:43668797..43675444 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:43668797..43675444 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tcgggtcttgggcgtcggcttattacgggatcacagagtggtgaattcaccctatggaatggccaatcttttaattttgaaatgatccttcaggctcatgaccaagctgtaagatcaatgatttggagtaacaatgagaactggatggtcactggtgatgatggtggtgcaatcaagtattggcaaagtaacatgaacaatgttaaagttaataaaacagctcacagagaatcagttcgtgacttgagcttttgtagaacagacctgaagttttgctcctgttctgatgacactactgtgaaggtttgggactttgcaagatgccaggaagaaagatccttaactggccatggttgggatgttaagagtgtcgattggcaccctacaaaatctttactggtttcaggtggtaaagactatctcgtgaaactttgggatgcaaaaagtggtagagagctacgttcattccatggtcataaaaacattgtacaatgtgtaaagtggaatcagaatgggaactgggtgttgactgcctccaaggatcagattattaagctatatgatattagatccatgaaagagcttgaatccttccgtggacacaacaaggatgtgactgctttggcatggcatccatttcatgaagaatattttgttagcgggagctatgatggagcgatctttcattggttggttggccatgaaactccacagatagagataaataacgcacatgacaatagtgtgtgggaccttgcctggcatcctgttggttatctactttgcagtgggggcaatgatcatgctacgcgattttggtgtagaaataggcctggtgatcttacccgcgataaatacaacagcggacagatgcaaggttacggtgaccaacatcctgcttttgctggccgtgctatgggtggattccagatgcctgaaccttcaacaacacctggaccatttaatactggattatcacgaaatgaaggcacaattcctggcattggggtcgcaatgcctcttgatggatctgatcatggagagcagaggccatcgatacctggccttccacctgggcaacctcccttgcctccaggtccccatccatctcttctagccggtgggcagcaacagcaatatcaacagatgcagcagcagcatcctcaatttcctcgaccaccacctccaaatatgcctcaattgcagcccccagcacacatgcttccacacgcgcaaggatctcgagcaccacttcctcagcttccatcaatgtcaggtccaccaccagtgaatccaccactaccacctatgcctcacccaatggcaatgcaagtacaaggttcatcaaaccagatgatgcctcaaatgccacagcacttgattggcatgaatcagacacaccagggccctcctagtaatatgcctccaatgggtggctttccaaatggaatgggaaatattcaaggtggatctagtgcttctggcatgcaaaactttcctatgggaggcatgtacaacaggcctcagggaaaaatgcctccacaagcacaagcacagatgacatccatccctggtctgagctcatatcagccgggtatgggcaatgtgggccttccgccgccacccccacagcatccaccgcctcgcggttcagcgccgcaatga</cdnaseq>

Protein Sequence

<aaseq>SGLGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAVRSMIWSN NENWMVTGDDGGAIKYWQSNMNNVKVNKTAHRESVRDLSFCRTDLKFCSCSDDTTVKV WDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDYLVKLWDAKSGRELRSFHGHK NIVQCVKWNQNGNWVLTASKDQIIKLYDIRSMKELESFRGHNKDVTALAWHPFHEEYF VSGSYDGAIFHWLVGHETPQIEINNAHDNSVWDLAWHPVGYLLCSGGNDHATRFWCRN RPGDLTRDKYNSGQMQGYGDQHPAFAGRAMGGFQMPEPSTTPGPFNTGLSRNEGTIPG IGVAMPLDGSDHGEQRPSIPGLPPGQPPLPPGPHPSLLAGGQQQQYQQMQQQHPQFPR PPPPNMPQLQPPAHMLPHAQGSRAPLPQLPSMSGPPPVNPPLPPMPHPMAMQVQGSSN QMMPQMPQHLIGMNQTHQGPPSNMPPMGGFPNGMGNIQGGSSASGMQNFPMGGMYNRP QGKMPPQAQAQMTSIPGLSSYQPGMGNVGLPPPPPQHPPPRGSAPQ</aaseq>

Gene Sequence

<dnaseqindica>6194..6268#5802..6068#5235..5680#4924..5012#4589..4678#4218..4296#3915..3978#3273..3360#3121..3181#2992..3051#2769..2866#2611..2682#2406..2488#2246..2328#1669..1678#gaaccccgaacccccgcgccgcacggatccaaaaccctagctcaggtcggcggggctcgcggcggcggagatgatgcagcagcagcagcagccgccgccgccgccgcctccgccgcagcacccgccgccgcctcaggccgggggcggcggcggcggggagttctaccggggcccgccgccgcagccgccgatgcggcagctctcggcggcgtcctccaccaacatccccggcgactacgccgcgcaccaggggcaccccccgccgcagcagaaccagccgccgtacgacggtaacagtgccgctcttttggtagtttcgtcgctggctagggttaggggcacagcagcggtattggtgcgcgttcttatgttatcgtaattttggctcaattcagcttatggggacaatttcggtgctaaaaggatgcggaagcctgtccagcggcgaacagtggactacacaagcacagtcgtccgttatgttcaagtataaatataacaaacttatttctcaagcagttatagtgatatatgttttgttctattttgtgggagcctattatacagttgaactttgcttactatatgctccttttactgtgcctgctgcaaacatcacatgaatatgaaatgctcataagttgatttttctgtgcaataagatctagcaccctgtatttttcttattcttctgctagcactgatcaccattatgtatatgacatgcaggctcgcatgtggcagcgggatgctagggacaggcccactgtgcagccgactccagctgctgttctggacgtatgttaccttacccatttgccttgcttgtaaccaacatgttaaaagatagttgccatactgttttctgtttttagacttttatacttctgacgctcacatttcttttgtaatttggatttcaacaaaccactatgtacattatattgatgtcctttgcaatctcatgattgggaagatcttgaatattcttgagtcaaggttctggttaaacggaaatgttatgcagtaaaaatgatagtcttagaaaaagaaaactatattgttgtatgaatggattgttgtatgtggattaatcaaactcctgttgctatctagggagagtgcctatcagatcctgtctttggttgttgtttttgggccatttagcttgctaattaatgcataagttttcagttttgccacaactatgtaaatctgtctggatgttatttatgatatatatgtgagataaatcctccatggtacaacgtaaaactgagggtgctcaatggattaagctgacaaaattagatctttaactcttcagtcttcaggcaatattttacgtagaacatacttatgtctcattccttttaattagctgagtgctgctattttggttaagggttttggattgattactgggtagtgctgtcatcttggacaaaagatgattaagtttgatgaattaattgttcagtttggatgattatgaaattgtctgtatctactgtattttgaatacattgtctggtatctggatatcctgattaatgtgggttttttttttcagatgttgccgtctgttgcataccccgataatccctcaacaagttttgctgcaaaatttgtacattcatcaataaacaagaaccgatgctctattaatcgggtcttggtgagttctatgatatccatctctatgctttcctagtatcccaactgctatttttatatttttcaaagagctccactaagccttggctagtgcatggtcactgaaggacagcgataccttcagaatgctgaaaactatagaatcgatctaacttctaggtgttcaccaccattcaccttattgctgagcttccttttcttctgaaatctaattttatatttatctgtaggcagctactcttaccattttaaatcaaatatatttgatggtatattatatttttacttgttttctacattttttatggtagaattaaggattgatggcagtacaactttaaaatgtcacttgataggctcacacactgtttgaaaaatgttccaatttttttacaccagctagtgcagagggttgataactccattccaagtatctttatattggtgtaatctaactgaattcgtatattgtgtaccacgttgatattattaggctaaatatgatttctccttttgtcatttatgtgtctaatgtatcgttatttgttgataaagtggactcccacagggcgtcggcttattacgggatcacagagtggtgaattcaccctatggaatggccaatcttttaattttgaaatgatccttcaggtattctataattttgctccagattttctagtaatgtgtcattgagtttgctgatttttggaggaatttgataataggctcatgaccaagctgtaagatcaatgatttggagtaacaatgagaactggatggtcactggtgatgatggtggtgcaatcaagtatgttggccttttgaatttttatcactgtcagtctgtcaccctgttggatactgatccttaagttaacatgttgatcttttcactgacatgtcaagtgcacgttttgacttcctttgtaggtattggcaaagtaacatgaacaatgttaaagttaataaaacagctcacagagaatcagttcgtgacttgaggtgatggcagccccatgtgcttttttctttactttacctataccaagttaatgttcattctctgttacaatgcatcttttaaacagcttttgtagaacagacctgaagttttgctcctgttctgatgacactactgtgaaggtttgggactttgcaagatgccaggaagaaagatccttaactggtaatgttgttgtacttttctatgagcccgaactacttgatcctcgcatgcatgaagttattgcatgatatcttatattatttttacccatcaagtaacctgaatttgccttcatactcagccaggccatggttgggatgttaagagtgtcgattggcaccctacaaaatctttactggtttcaggtcagttattatgcttgctagtttaatgagcttatttgtgtagagctaattctattttttgttatttaggtggtaaagactatctcgtgaaactttgggatgcaaaaagtggtagagagctacgttcattgtatgtattgtttcatcgttcgtattactttgctaatgttgaaagtcagcaacacatcagcacatgatgacctgatgagctatatctgcagccatggtcataaaaacattgtacaatgtgtaaagtggaatcagaatgggaactgggtgttgactgcctccaaggatcagattattaaggtcaatattttttgcttgtgtaccctgttctgttcatccattctttctgcaaagtgttctgtttacactgcttagttttctcatctatttgacatgcttgtgctagtgaggtataccatgggaatgggggggttcatactcaatgttgatgcaaaattttaatgtccctaggacgcatcatcagaaaaaaaaaaacagctattcagcatgactacttcctccgtttcactttatagacgttttgggttttaaatagattcatgcatgtccaaattcttacagctagtgaatctagacaagagatggagaggccaaaacgtcttaaatgtgaaacagagggagtaataatcaattattgaaacaaagttttatttggtggttgaaactattgtctagagaagaattactgctttctccataattaagtgaattcaatataatattttctgttttcttaataagacattataagttccgtttgtttcatatctactaaataaaacacactatattggatagtttctaacttgctattgctaatgtgttttatgcagctatatgatattagatccatgaaagagcttgaatccttccgtggacacaacaaggatgtgactggttagattctcactacataatttgaattttaggttcccttcctggagtttaagatttgatacatttttcatttttcaatcaaacagcagttgtaatttatttgtttcattgcaaatcatgcattatggatatcaaactactgactgaaatgttgcatgggaaattgtcatatccgccactcccttatttgccatggttgttttgaatagataatatactcaatttatttatttatgcagctttggcatggcatccatttcatgaagaatattttgttagcgggagctatgatggagcgatctttcattggttggttgggtaagacatcagaaatgcaattaaaataaaaaaattctagttggcatggtagtttcttttcccattggaacttgggtttttgtttaactgtgatattgtagtgttagaccactctggcttgtgtttacgattacttaagtttactgtgtgcttaacctgtctgatgaatatatttagctttcaagtttcttcttgaacttttcacttgttacattcttttagaggaaatacatttttttgttggctacaaatgactcaatctgactaaattaaaatttcaattgattggcagccatgaaactccacagatagagataaataacgcacatgacaatagtgtgtgggaccttgcctggcatcctgttggttatctactttgcaggtactgccagagttacagatacaaaattctgaatttgcagtttagatttatgctcgtctttttcttgagttatttttattcttctaacctataattgcagatatggatatggaaacataattatgtttacttattccttatttctgcatctcaatgattctaactgctatttctgtttctccttttatctcattatgctgtgcaatgcgtcagatttcactgatacaattgtcacttccgttcagtgggggcaatgatcatgctacgcgattttggtgtagaaataggcctggtgatcttacccgcgataaatacaacagcggacagatgcaaggtagcttttccttttgttgagcttctttcttggtttattcaacttcttgttctattcatattacaaaataccacgagtcaccacatgcctttgatggatgattagttagacaatttgatggacatcacttgttcacttactgcacatgtctcggtgtttttttttatttgggaccagacaagaaatgtttgatacatataataaactgctattatgtttcaggttacggtgaccaacatcctgcttttgctggccgtgctatgggtggattccagatgcctgaaccttcaacaacacctggaccatttaatactggattatcacgaaatgaaggcacaattcctggcattggggtcgcaatgcctcttgatggatctgatcatggagagcagaggccatcgatacctggccttccacctgggcaacctcccttgcctccaggtccccatccatctcttctagccggtgggcagcaacagcaatatcaacagatgcagcagcagcatcctcaatttcctcgaccaccacctccaaatatgcctcaattgcagcccccagcacacatgcttccacacgcgcaaggatctcgagcaccacttcctcagcttccatcaatgtcaggtccaccaccagtgaatccaccactaccacctatgcctcacccaatggtaatttagtattacctaaacgttctgttctctgcaagatcttttgttgcaagtaaagaaacgtgctaacaactgctagattgacagctgatatattgattttgatatttccactttgcaggcaatgcaagtacaaggttcatcaaaccagatgatgcctcaaatgccacagcacttgattggcatgaatcagacacaccagggccctcctagtaatatgcctccaatgggtggctttccaaatggaatgggaaatattcaaggtggatctagtgcttctggcatgcaaaactttcctatgggaggcatgtacaacaggcctcagggaaaaatgcctccacaagcacaagcacagatgacatccatccctggtctgagctcatatcaggtaaaaccagaacattacatttcaatgagtttgttggaccttaaggtgattttgttatatatttatgttgctcacatgctgagaattatttagtgacgttgctgcttgttggtcaatcttcgcagccgggtatgggcaatgtgggccttccgccgccacccccacagcatccaccgcctcgcggttcagcgccgcaatgatctcttgtaactgtgcaatgatgattggaagccttctattttccatgcggtaaaacatatgtagtatgatcgtattcgaggaagagaggagtctccagcaaacggagacggatatcttggataatgatagttaggattgttcttatctcttgcaccgtcggctaggatacattttgctgcccttggactgaacgggctgtgctgtaacaaacctgtccacctaacagcttgtttctgctccctatttatgctgctcgtgttgtattagttcttatgctactgaggttttcaacatagacggaggctatcaagcagttttgtaacaagtgagaatcattttgcctggcccagtgaatttgattggttgacggcgtacgctc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0951000, RefSeq:Os01g0951000