Difference between revisions of "Os01g0960200"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os01g0960200| Description = Protein of unknown function DUF630 domain containing protein| Version = NM_001051999.1 GI:115442368 GeneID:4325241| ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0960200|
 
GeneName = Os01g0960200|

Revision as of 19:06, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0960200

Description

Protein of unknown function DUF630 domain containing protein

Version

NM_001051999.1 GI:115442368 GeneID:4325241

Length

2829 bp

Definition

Oryza sativa Japonica Group Os01g0960200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44120669..44123497

Sequence Coding Region

44120669..44121959,44122069..44122280,44122397..44122620,44122720..44123497

Expression

GEO Profiles:Os01g0960200

Genome Context

<gbrowseImage1> name=NC_008394:44120669..44123497 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:44120669..44123497 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggctgcaccacctcgcacgacgcgttcgccgcagcgagggcgcgggcgcgggcgtcgtcgtcttcgttggagcggccgcggcgggcgcaggccgacccggccgcgctgtgccgcgagcgcgcggcgctgatccgcgccgcggccgaccggcgctacgcgctggcgtccgcgcacgccgcgtacttccgctcgctcgccgccgtcgggggcgcgctgcggcggtttgcggcggccgcgctcgcgccgggcaccccgccgtccggttcctccccggtgctcaccctcccgccgtccccggcgaagccggtcgacgcctcggccgccgcggccaggtcgagcctcccgccgtcgccgtcctcgtcctccaccgtctcgcctctctcgcacaccctctccgacgaggacctggacgcgcacggcgccgccaaacacgccaccgccgccgccgcgtcatcgacgaggtatcactaccactacatgaggaactctcccaccgtgcccaccacggtgtacgaggaccccaatggcgaggccagctatggtggctacggtggctacgggtacacgtattcgtacgggccctacggcgaggtggttgcggaggagaggccggagacggcgacgccgccgccaaccgcggaggtcgcggcgtgggacttcttcgaccccttcacctcctacgatcaattcatagaggattacaagggccacgacggcggcaacttgccttccaatagcccgaattactcggagctgaggagggtggaggggatcccggagctggaggacgaggcggagctcgaggcggcggaggcgaaggcgaaggcatccaaaccatcaacctccgtcgttgctgatcaaggtgggaaagggaagagaccaatttcttcagacgtcagctcgaagggggaggcttctgatgggaagctgctgcagaggaagggatccggtggcaatggcgagccagagaatgccagcttgaagggcagtggtagtggtgacaacaatggcagctccaccagcaagaagaaaggtatagccttcgatggcattgagcaaccgattgctgctgctcagggggaaggtgggagtggcaagtctgtgcagtcgactgctgtgagcagtgagtcgttctcgccgcttcaccaggggaacaggagtgtcatggaggccatggacgagatcaaggagaggttcgatgaggcgctgaactgcggcgaagaagtttccaagcttcttgaggtggggaaggttcccccccagagttccacgccccgagttcttagatatttgtcttccagagtgatggatcctctatctctgaccgtgccttcatcttcgtgcctgccgaagccacgtagaaagtcaagaacattgagcggaaaggccagcacttcatcaaatccatcagtagctggtagaagaaacagtgctggaagtctctcatcaactctggagaagctatgtgcttgggaaaagaagctttaccaggagattaaggatgaagagaagctgaggattctttatgaaaagaagtacaggaggctaaaatctctggacgaacgaggattagattcaactacgatcgacgccaccaggttatcagtaaggaacttgcaatccaggattaccatcaatattagaacagccaatgccttctcatcgaagatacagaatattcgagatgaagagctatatcctcaactcgttgatctcatcattggattgagaagaatgtggaaagctgttctattgtgtcacgagaagcagctatcggccattcaggacagcaaaatgcacctgatcaaggcagtgaccattagccaatccaatgctgctgcagtagccacagtagaattagagagggagcttgcaaaatggtaccgctgcttcaacaagtggatcagctcacagaggtcttatgctgaagcactgaacggatggctgaggaaatggctcactgagcctgaggtgcaggaggaaaacacaccggatggcgccccgcctttctccccaggcaagctaggcgccccgcctgtgtttgtcatatcaaatgattggctccaagtgattgagatggtttccaagaatgaagtgttgaagacaattgaccaattctccaagcttgtgcatgagtacaagaagacccaggaaaaggagcacaggcagaaacgaaaagctgatcatgcttcccgagattataacaaaaggcgcaaagttctgcagagggaacttgggttgagtaccagtcttgatatggttgcagtcatggagaacactcaccacagccatgacaaccgtgtaatcgagctagagaagatgagtagaaagaaggatgaggagaagaccaagcatgatgagattgtaaaacatgcccatcttgcagcttcagctactctaccagtcgggttggtccctgtgctgcaccagatcgtcagcttctcccaggaaaatgtgcaaaagtacacaagcatcagaacccgaggtgcccgggtccactga</cdnaseq>

Protein Sequence

<aaseq>MGCTTSHDAFAAARARARASSSSLERPRRAQADPAALCRERAAL IRAAADRRYALASAHAAYFRSLAAVGGALRRFAAAALAPGTPPSGSSPVLTLPPSPAK PVDASAAAARSSLPPSPSSSSTVSPLSHTLSDEDLDAHGAAKHATAAAASSTRYHYHY MRNSPTVPTTVYEDPNGEASYGGYGGYGYTYSYGPYGEVVAEERPETATPPPTAEVAA WDFFDPFTSYDQFIEDYKGHDGGNLPSNSPNYSELRRVEGIPELEDEAELEAAEAKAK ASKPSTSVVADQGGKGKRPISSDVSSKGEASDGKLLQRKGSGGNGEPENASLKGSGSG DNNGSSTSKKKGIAFDGIEQPIAAAQGEGGSGKSVQSTAVSSESFSPLHQGNRSVMEA MDEIKERFDEALNCGEEVSKLLEVGKVPPQSSTPRVLRYLSSRVMDPLSLTVPSSSCL PKPRRKSRTLSGKASTSSNPSVAGRRNSAGSLSSTLEKLCAWEKKLYQEIKDEEKLRI LYEKKYRRLKSLDERGLDSTTIDATRLSVRNLQSRITINIRTANAFSSKIQNIRDEEL YPQLVDLIIGLRRMWKAVLLCHEKQLSAIQDSKMHLIKAVTISQSNAAAVATVELERE LAKWYRCFNKWISSQRSYAEALNGWLRKWLTEPEVQEENTPDGAPPFSPGKLGAPPVF VISNDWLQVIEMVSKNEVLKTIDQFSKLVHEYKKTQEKEHRQKRKADHASRDYNKRRK VLQRELGLSTSLDMVAVMENTHHSHDNRVIELEKMSRKKDEEKTKHDEIVKHAHLAAS ATLPVGLVPVLHQIVSFSQENVQKYTSIRTRGARVH</aaseq>

Gene Sequence

<dnaseqindica>1..1291#1401..1612#1729..1952#2052..2829#atgggctgcaccacctcgcacgacgcgttcgccgcagcgagggcgcgggcgcgggcgtcgtcgtcttcgttggagcggccgcggcgggcgcaggccgacccggccgcgctgtgccgcgagcgcgcggcgctgatccgcgccgcggccgaccggcgctacgcgctggcgtccgcgcacgccgcgtacttccgctcgctcgccgccgtcgggggcgcgctgcggcggtttgcggcggccgcgctcgcgccgggcaccccgccgtccggttcctccccggtgctcaccctcccgccgtccccggcgaagccggtcgacgcctcggccgccgcggccaggtcgagcctcccgccgtcgccgtcctcgtcctccaccgtctcgcctctctcgcacaccctctccgacgaggacctggacgcgcacggcgccgccaaacacgccaccgccgccgccgcgtcatcgacgaggtatcactaccactacatgaggaactctcccaccgtgcccaccacggtgtacgaggaccccaatggcgaggccagctatggtggctacggtggctacgggtacacgtattcgtacgggccctacggcgaggtggttgcggaggagaggccggagacggcgacgccgccgccaaccgcggaggtcgcggcgtgggacttcttcgaccccttcacctcctacgatcaattcatagaggattacaagggccacgacggcggcaacttgccttccaatagcccgaattactcggagctgaggagggtggaggggatcccggagctggaggacgaggcggagctcgaggcggcggaggcgaaggcgaaggcatccaaaccatcaacctccgtcgttgctgatcaaggtgggaaagggaagagaccaatttcttcagacgtcagctcgaagggggaggcttctgatgggaagctgctgcagaggaagggatccggtggcaatggcgagccagagaatgccagcttgaagggcagtggtagtggtgacaacaatggcagctccaccagcaagaagaaaggtatagccttcgatggcattgagcaaccgattgctgctgctcagggggaaggtgggagtggcaagtctgtgcagtcgactgctgtgagcagtgagtcgttctcgccgcttcaccaggggaacaggagtgtcatggaggccatggacgagatcaaggagaggttcgatgaggcgctgaactgcggcgaagaagtttccaagcttcttgaggtggggaaggttcccccccagagttccacgccccgagttcttagatgtgggtaatgcatttgcattgtgtttcttactagctaccagtatcattttgatgcaactaggtaatgtgtgctagagcatttatagattttctcgtgttgtctctgcagatttgtcttccagagtgatggatcctctatctctgaccgtgccttcatcttcgtgcctgccgaagccacgtagaaagtcaagaacattgagcggaaaggccagcacttcatcaaatccatcagtagctggtagaagaaacagtgctggaagtctctcatcaactctggagaagctatgtgcttgggaaaagaagctttaccaggagattaaggtacacacataatctctgcaccagttatcgcatcatagaacaaagcataggtgttaattcatatgctatatgatttaccgccgaacacgtgtttgatggttaggtggttgttctaggatgaagagaagctgaggattctttatgaaaagaagtacaggaggctaaaatctctggacgaacgaggattagattcaactacgatcgacgccaccaggttatcagtaaggaacttgcaatccaggattaccatcaatattagaacagccaatgccttctcatcgaagatacagaatattcgagatgaagagctatatcctcaactcgttgatctcatcattgggtatgaaacttcatgatttctaattgtactactattcttcaacacttcaccctgatgacagtttcatctaatgaatacaatttgttgtcttgagtgcagattgagaagaatgtggaaagctgttctattgtgtcacgagaagcagctatcggccattcaggacagcaaaatgcacctgatcaaggcagtgaccattagccaatccaatgctgctgcagtagccacagtagaattagagagggagcttgcaaaatggtaccgctgcttcaacaagtggatcagctcacagaggtcttatgctgaagcactgaacggatggctgaggaaatggctcactgagcctgaggtgcaggaggaaaacacaccggatggcgccccgcctttctccccaggcaagctaggcgccccgcctgtgtttgtcatatcaaatgattggctccaagtgattgagatggtttccaagaatgaagtgttgaagacaattgaccaattctccaagcttgtgcatgagtacaagaagacccaggaaaaggagcacaggcagaaacgaaaagctgatcatgcttcccgagattataacaaaaggcgcaaagttctgcagagggaacttgggttgagtaccagtcttgatatggttgcagtcatggagaacactcaccacagccatgacaaccgtgtaatcgagctagagaagatgagtagaaagaaggatgaggagaagaccaagcatgatgagattgtaaaacatgcccatcttgcagcttcagctactctaccagtcgggttggtccctgtgctgcaccagatcgtcagcttctcccaggaaaatgtgcaaaagtacacaagcatcagaacccgaggtgcccgggtccactga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0960200, RefSeq:Os01g0960200