Difference between revisions of "Os01g0960500"

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(Created page with "{{JaponicaGene| GeneName = Os01g0960500| Description = Copine domain containing protein| Version = NM_001052002.1 GI:115442374 GeneID:4325244| Length = 4332 bp| Definitio...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0960500|
 
GeneName = Os01g0960500|

Revision as of 19:06, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0960500

Description

Copine domain containing protein

Version

NM_001052002.1 GI:115442374 GeneID:4325244

Length

4332 bp

Definition

Oryza sativa Japonica Group Os01g0960500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44145791..44150122

Sequence Coding Region

44146420..44146503,44146703..44146759,44146862..44147006,44147094..44147221,44147427..44147532
,44147601..44147677,44147752..44147849,44148433..44148546,44148642..44148782
,44148906..44148990,44149209..44149337

Expression

GEO Profiles:Os01g0960500

Genome Context

<gbrowseImage1> name=NC_008394:44145791..44150122 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:44145791..44150122 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtggggcgatcggactcatcacaagcactggaatcaagctcatgttccctctggaacttctaaggacaaattccaggccaaagggcaaccgaagtttattcctgacaattacagttcagtggatgaggttactgctgcgttgagagacgctggtcttgagtcatcaaatctgattcttggtattgacttcaccaaaagcaatgaatggtcaggcagatattcctttggaagaaaatctctgcatgccattagtgccacccctaatccatatgagcaagcaatttctataattgggcgaacactgtctccttttgatgatgacaacttgataccatgttttggatttggtgatgcttctacgcatgatcagtccgtcttcagcttctaccaagacagtcgttcttgctgtggttttgaagaggttcttgaaagatataggcaaattgtcccacatttgaacctttcaggaccgacttcttttgctcctcttatctacgcagcaatttctgttgtcgaaaatagtaacttgcaataccatgtcctcgtcatcatagctgatggacaggtgaccacctcaaatacaaaggatggaaaattaagtccgcaagagcaagcaactatacaagcaattgttgatgcaagctactatcctctttcaattgtgatggttggggtgggagatgggccatgggatgcgatgcaacacttcgatgactgtattcctgacagagcttttgacaattttcagtttgtgaacttcacagagattatgtcaacaagtaaggatatgccaaagaaagaggctgcatttgcccttgcagcccttatggaaataccttctcaatataaagcaactcaaggcctccgaccactggagaagcatgcgggtcatgtggccagtcatctgaggattcttcctcctccaaacaaagttcttgagaacgacaacgctgcagcctcacgtcctccaactgcaagctcccagtcaactggcttcggaaagaataccactgatgagcaggtttgcccaatctgcttaaccaatccaaaggacatggcttttcaatgcggtcacctgacatgcaaggaatgtggcccaactctatcaacatgccccttatgccgcgtgccaattacgatgcgtgtaaggctctactcgtga</cdnaseq>

Protein Sequence

<aaseq>MWGDRTHHKHWNQAHVPSGTSKDKFQAKGQPKFIPDNYSSVDEV TAALRDAGLESSNLILGIDFTKSNEWSGRYSFGRKSLHAISATPNPYEQAISIIGRTL SPFDDDNLIPCFGFGDASTHDQSVFSFYQDSRSCCGFEEVLERYRQIVPHLNLSGPTS FAPLIYAAISVVENSNLQYHVLVIIADGQVTTSNTKDGKLSPQEQATIQAIVDASYYP LSIVMVGVGDGPWDAMQHFDDCIPDRAFDNFQFVNFTEIMSTSKDMPKKEAAFALAAL MEIPSQYKATQGLRPLEKHAGHVASHLRILPPPNKVLENDNAAASRPPTASSQSTGFG KNTTDEQVCPICLTNPKDMAFQCGHLTCKECGPTLSTCPLCRVPITMRVRLYS</aaseq>

Gene Sequence

<dnaseqindica>3620..3703#3364..3420#3117..3261#2902..3029#2591..2696#2446..2522#2274..2371#1577..1690#1341..1481#1133..1217#786..914#gggtgttatattctgaaaattctccttccactgccaccgcacaagcaagggcaaagcttagcttagcttcgctggtagtggtggtggctgtgccgtccagccgctgccatcttcctcaccagcagcagctagcagcggcgcccttctccggcctctccgtgctttgctgttctttgctttggttcggggatccgatttccattccatccatctcttgctcccgcgggtctcgtctctgtctgtgtttccctggtaagtgctaacatatgcgtctttccctttcttcgggattccttgtttctgttccttaattatttaggaattattttctgctctgttctgcgccaattcaatttgggcctatgtaaatcatgcttttagagctcgtaactggacgagtaatactactagctgaatgatttcaacatgaattttatatatagtttcattccatctgtgttccaacatgtctcgccgcgccttatcgatttctacccatcataattgttgttaaattagggttaagcagcttataaatttattacaacgtttgcttatgtacaagtgcctctcctgtcccccttttgatttggcctttaatttgtagcgcaccatatttcaagtggtcaatccagaacggttctctctctcgaatcgatttttctctctgtttccatccaaattactactaaatgtctgcaaatttagctgaaaaatgtactcctagtttcttctgacatcgataattacttgtggatatgcttgcagatcattcattactggtcatgtggggcgatcggactcatcacaagcactggaatcaagctcatgttccctctggaacttctaaggacaaattccaggccaaagggcaaccgaagtttattcctgacaattacagttcagtggatgaggtgaccaacttaccagcaaatcttttaattagtattcttgtgttcatgtctcaagtctaaacaaattaatctgctacctttgatctctcctttagatataagtttattctccaaaatttcttaccaatatttttcaagctcgaatattcttcactacaggaaaatgatgcctgcagcatctgcttgtacgtaacctgttacctgttttgattttgaaggttactgctgcgttgagagacgctggtcttgagtcatcaaatctgattcttggtattgacttcaccaaaagcaatgaatggtcaggtgatgctacttctgtattgatgttacatacattggctgtttcctttaagccttgctatcaattttactcgaggatccgttttggtttaaacaaacatttttttccctgctgaatttctgtaggcagatattcctttggaagaaaatctctgcatgccattagtgccacccctaatccatatgagcaagcaatttctataattgggcgaacactgtctccttttgatgatgacaacttgataccatgttttggatttggtgatggtaagttatatctggatttcctcttttccccttacaaatttgttttcactagtatacttcctgtatgaactgctactatctaattcattatgtagcttctacgcatgatcagtccgtcttcagcttctaccaagacagtcgttcttgctgtggttttgaagaggttcttgaaagatataggcaaattgtcccacatttgaacctttcaggtaagaagggcatcatccccctttattcagttcagattgtagaatgataacaggttatgattttcacttactattttatttcagtaaccaccaaagaacagttcagtcaatatttagctgttcttttttttttgcggggaatatttagctgttctttcttctagcatggattatgatttagagtaaccaatgttttggtgtgccattttatttgtacaagttgtttttaaaaatattcaatatttcttctatcaaattgttatagcatagtacacacagagttgtccttgagaatgctcagcaatttggaaactagttttcagtcatcacttttgcagctttatttgctcattattcacggcatcatgattatatacttcgttgttctattatttggtcttgatttcattgaattttgaataactcctgtaaatgaaaggtattgtctaatgtagctcatttgctgtgtttcaccgaataataataactcaataagctgtttgtaagtagtaggtaactccactagcactgctgttttgtgctttttgcctggttcattattttgttcgaccggtgtgtgcaggaccgacttcttttgctcctcttatctacgcagcaatttctgttgtcgaaaatagtaacttgcaataccatgtcctcgtcatcatagctgatggacaggtaattgtttacagccactgaaaattacttatatagcattgccagcatgtgacttacctaagcaaaaactgtaggtgaccacctcaaatacaaaggatggaaaattaagtccgcaagagcaagcaactatacaagcaattgttgatgcaaggtaaattaaattcgtccttggttagaacttggtgttaaagttttactgaaacccatttggttgctcagctactatcctctttcaattgtgatggttggggtgggagatgggccatgggatgcgatgcaacacttcgatgactgtattcctgacagagcttttgacaattttcaggtgattataatactactattttgtcatttcaattccgaaatttcaacattgctccacttatgcatgagcaaactgatgattccagtgagaaatcatactacgttgaatgtaaataatctactttctgactagaagagacttgtatagtgatttcatatctatttatttagctagaagttagaaccttactaataaactactgcagtttgtgaacttcacagagattatgtcaacaagtaaggatatgccaaagaaagaggctgcatttgcccttgcagcccttatggaaataccttctcaatataaagcaactcaaggcctccgaccactggagtacttgctcttctcagttcattgcagccctgcattagtttcatagcatccttatcacacactttgtttcttcatttttattaacaggaagcatgcgggtcatgtggccagtcatctgaggattcttcctcctccaaacaaagttcttgagaacgacaacgctgcagcctcacgtcctccaactgcaagctcccagtcaactggcttcggaaagaataccactgatgagcaggtaggcacaatttgggcaagtagctcttgatgagtttaaacatttttttttctccagaactgtggcataactcttattattttcttttatggcatcatcaaggtttgcccaatctgcttaaccaatccaaaggacatggcttttcaatgcggtcacctggtaaggttttctatgctgtggcatgagttctgttggtgaaatcaaattatgaaatctatgctggcatatgtataactatatttctagtgaaactgtaggtgaacatagtggaatcgtattttttttccaaaatttgaaatgattaaatcagtagtagtttgagggattaacagatcttctttacttctgtttgttcaagacatgcaaggaatgtggcccaactctatcaacatgccccttatgccgcgtgccaattacgatgcgtgtaaggctctactcgtgaggtcatctgaccttctagaatgcaggaacaaaggactcaattcaatcagtatagtgtatatggtgtcgaacagtaaggagatgaagaactcggaagcacaaggactctcaattcatgccaagatgcggatggcgtgaaaactatgtgaaaaaaaaggctaaattaaactatgctggattagtttcagtttcaaaggacaggtatatcctttgggatattgtatttgtttctttttcttgtatgtagtaggaataagctgacctgtgatgcttggcccaaagaacttaccgaaggcagttgcggagatggctttgctgctgcattgttgatcttcagagacaatcctaattgggacgatttcaagtagtgaagtaccaatacatcctttccttttgtcttgcagatcaaattccctgtgactgcaatcgacctgttctaattgcagggatataaaagtgtgaaacaatgggagaaacacacggtaccagtcatcttattctgaaactcgtaatggaggtcgatctgaatggatcagctacgttacgtgctcagctcgttgtaatctattttagcagctgattgtgttatttacttcatcttttcaatttctactccctagtttttggtcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0960500, RefSeq:Os01g0960500