Difference between revisions of "BGIOSGA029434"

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(Created page with "{{IndicaGene| GeneName = BGIOSGA029434| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029434, complete gene.| tag = OSJNBB0...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA029434|
 
GeneName = BGIOSGA029434|

Revision as of 17:17, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA029434

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029434, complete gene.

LocusTag

OSJNBB0034B12.20

Ensembl Transcript ID

BGIOSGA029434-TA

Ensembl Protein ID

BGIOSGA029434-PA

Length

6750

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:18922890..18929639

Sequence Coding Region

18929406..18929639,18929226..18929267,18929042..18929139,18928369..18928444,18927864..18927992
,18927735..18927781,18927297..18927420,18927084..18927200,18926394..18926423
,18926203..18926302,18925577..18925683,18925241..18925384,18925050..18925154
,18924334..18924480,18924151..18924204,18923940..18924005,18923747..18923791
,18922890..18923051

Genome Context

<gbrowseImage1> name=IndicaChromosome09:18922890..18929639 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:18922890..18929639 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGCCGGTGCAGGCGGGGGCGGCGCCCGCGTCGCCGTCGGCGGCGGCGGCGCTCGGGTTCCTCCTCCCGACCTGCTGGGAGATCGAGGTCACCTGCGCCGCCGCGATGATCCTCGTCGCGCTCTACGCCGCGTACGAGCTGCTCGCCCCGCGCCCCGCGTCGGCGGCGGGGGGATCCTCCGCCGCCGGGGACGACCTCCTCCTCGTGCGGGACCTCGACGGCGCCGACAAGTACAAGGGTGGCTCGAGTGGGCCCTCGGCGTACGTGGTGAAGCTAGAGTTGTTGGCTGCGAAGAATTTGATTGCGGCAAACTTAAATGGGACCTCGGACCCCTACGCATTGATCACTTGCGGCGAAGAGAAGCGTTTCAGTTCCATGGTTCCTGGCTCAAGAAACCCAATGTGGGGAGAGGAATTCAATTTTTTTGTTGACAGTCTTCCTGTAAAGATAAATGTGACAATATATGACTGGGACATTGTATGGAAAAGTACTGTTCTTGGTTCTGTTATTGTTCCAGTTGAATCCGAGGGACAGAGTGGACCAGTTTGGTATACGCTTGATAGTACATCAGGCCAGGTGTGCCTACATATTAAGGCAATCAAGGTCCATGAGAGTTCATCGAGGGCTCTAAATAGCTCTGCTGAGGCTGGTGCTCGTAGAAGAATTTCCTTGGATAAACAAGGACCCACTGTAGTTCATCAAAAACCAAGTCATTTGCAGACGATATTTGGACTTCCTCCAGATGAGGTTGTTGAACATAGTTATTCATGTGCACTTGAGAGGTCATTTCTGTATCACGGGCGCATGTATGTCTCTTCATGGCACATTTGCTTCCATTCAAACGTCTTCTCTAAGCAGATCAAGGTTATGCTTCCGTTGAGGGATATTGATGAGATAAGAAGAAGCCAGCATGCAGTTATTAATCCAGCAATCACGATATTTCTTCGAATGGGAGCTGGAGGACATGGGGTTCCTCCCTTAGGAAGTCCCGATGGAAGAGTCAGATATAAATTTGCATCATTTTGGAATAGAAACCATACATTTAGAGCATTGCAACGAGCTGTCAAGAACTTCCATACAATGATAGAGGCTGAGAAACAGGAACGTGCTCAATCTGCATTACGTGCACACAGTAGCTCAAGAAAAAGTAGCATGAAGGAGATAAATGTTCCAGAAGATTGTGCTGATTTAACAGGCCAATTACAACCTTTTGTCAAAGAGGAAGTTCTAGTCACTGTATTCAATGGATCTTTTCCATGTACTGCAGAGGAGTTCTTTAATACTCTGTTAAGTGATGATTCAAGTTACATCACGGAATTTCGGACAGCTCGAAAGGATAAAGATATCAATTTAGGTCAATGGCACCACGCTGATGAGTATGATGGTCAGGTGAGGGAACTTAATTGCAAATCAATATGCCATAGTCCAATGTGCCCCCCATATTCAGCAATGACAGAGTGGCAACATATGGTTCTTTCAGCTGACAAAACAGATCTGGTATTTGAAACTGTACAGCAAGTACATGATGTTCCATTTGGTTCCTTCTTTGAGGTACACTGTAGATGGTCTGTGAAGACTACCAGTTCTGACTCATGCAGTCTTAACATTAGTGCTGGTTGGTGCATAATGCAGTCGAAGATAAAGAGTGGTGCTGTGGACGAGTACAAGAAGGAAGTCCAGGAGATGTTGGAATTTGCAGAGTCGTATATGCGCAAAGTTAGAACTTCTAACCAAGACAATGGTAGTACACCTACTGAGCAAGACAACGGCGCTGTGACTGAGCAAGAAAATGTGGCGCCGGATAATACACCAAATGATGAATAA</cdnaseq>

Protein Sequence

<aaseq>MTPVQAGAAPASPSAAAALGFLLPTCWEIEVTCAAAMILVALYAAYELLAPRPASAAGGSSAAGDDLLLVRDLDGADKYKGGSSGPSAYVVKLELLAAKNLIAANLNGTSDPYALITCGEEKRFSSMVPGSRNPMWGEEFNFFVDSLPVKINVTIYDWDIVWKSTVLGSVIVPVESEGQSGPVWYTLDSTSGQVCLHIKAIKVHESSSRALNSSAEAGARRRISLDKQGPTVVHQKPSHLQTIFGLPPDEVVEHSYSCALERSFLYHGRMYVSSWHICFHSNVFSKQIKVMLPLRDIDEIRRSQHAVINPAITIFLRMGAGGHGVPPLGSPDGRVRYKFASFWNRNHTFRALQRAVKNFHTMIEAEKQERAQSALRAHSSSRKSSMKEINVPEDCADLTGQLQPFVKEEVLVTVFNGSFPCTAEEFFNTLLSDDSSYITEFRTARKDKDINLGQWHHADEYDGQVRELNCKSICHSPMCPPYSAMTEWQHMVLSADKTDLVFETVQQVHDVPFGSFFEVHCRWSVKTTSSDSCSLNISAGWCIMQSKIKSGAVDEYKKEVQEMLEFAESYMRKVRTSNQDNGSTPTEQDNGAVTEQENVAPDNTPNDE</aaseq>

Gene Sequence

<dnaseqindica>1..234#373..414#501..598#1196..1271#1648..1776#1859..1905#2220..2343#2440..2556#3217..3246#3338..3437#3957..4063#4256..4399#4486..4590#5160..5306#5436..5489#5635..5700#5849..5893#6589..6750#ATGACGCCGGTGCAGGCGGGGGCGGCGCCCGCGTCGCCGTCGGCGGCGGCGGCGCTCGGGTTCCTCCTCCCGACCTGCTGGGAGATCGAGGTCACCTGCGCCGCCGCGATGATCCTCGTCGCGCTCTACGCCGCGTACGAGCTGCTCGCCCCGCGCCCCGCGTCGGCGGCGGGGGGATCCTCCGCCGCCGGGGACGACCTCCTCCTCGTGCGGGACCTCGACGGCGCCGACAAGGTAACGGGGGGACTGGCTTTGGGGTTTTTTTTGGGGGGGGGGGGAATTTTTGCGAGGCTATTGGCGTTGTTGATCACTGATGATTTTCTACTAATGCTGCGATCGCTTCGTCGGCTGGTTGCGTGTGGATTTCTGCAGTACAAGGGTGGCTCGAGTGGGCCCTCGGCGTACGTGGTGAAGGTGAGCAGCGATCGATCAATCCTTCTCTCTCCATTTTTGTTGCCTATTGTGCAGATGGTTTGTGTAACTCGGATGTGTTTGTTCAGCTAGAGTTGTTGGCTGCGAAGAATTTGATTGCGGCAAACTTAAATGGGACCTCGGACCCCTACGCATTGATCACTTGCGGCGAAGAGAAGCGTTTCAGGTGATCATGTTGATTTAGTAATGTTCACCATTTTTAATTTCGATCATTTTGACCCGTATGTTAGGCATTAACTGTATATACGTGTATGGCTCATGTTTCTAACTCATATGTGAATATAAGAGTGTAATCTGTTCATCCTTTGCCACTTTCTACCTTTTTCAATGAGAACCATAATGTACATGGAGGCAAAACTAACGTTAAATGAAGAAAAATGAGTTTTCTATAAAGGAGTGTTTATTGATTGAATTGAAGGGTAATTGGAGGATAGGTTGAGTTTGATTTATGAATAGCAGACAGGTAATAGGAAAGGAGGAAATACTTGATTTTCCCTTAAGATTGTGCCAACCACCAAATATCTCAGGAAATCAGATAAAAGGGGGTGAGGGTTTAGTTTTTGCTATATACTAAAGTCTGAAGTGTCTGATCCACATGCCACCTGAAAAGGTTTCTGTGGGAAAAGGTGGTGGTGCAAAATGGAATGATGAATGTTCTGGTACAAGACGATATTATTCTCTTTTATAAAATTATAGTGTGTAAAGCAGCTACTGTTTGAGTTGTCTATTTATCCTCCTTTTTATCCCTCTTTATGCCTTACAGTTCCATGGTTCCTGGCTCAAGAAACCCAATGTGGGGAGAGGAATTCAATTTTTTTGTTGACAGTCTTCCTGTAAAGGTTATTCCCAGTACCCTTTTCTGCTATTTTGGACTCTCTTATAAGATGCAATGCTTATTCAGGACTTCTATACCAAAGCTTGTCAGACTTCTTGGTGCACAACTTTAGTGTCAGAAAAAATATGCACTGTTGTTGTAATAGCCTTGTAACATAGGACTACCTGGCTCAAATTGGACTGTTTTTCTTGCGAATTCGTTAGTAGTTATACTTCAATTTGAAGGTTTACCACCACATTGCTGCAAATTCACTGTTGCTCTTATCTAGCTATTTCCACTGATAGATACCTATCACATTTTTTGAAGTTTTTTTAAATAAATATAGAATTGTGAGTTTCACTTTGCTTCTTCTCACTCATTTGTTCTCTACACTTCCATAGATAAATGTGACAATATATGACTGGGACATTGTATGGAAAAGTACTGTTCTTGGTTCTGTTATTGTTCCAGTTGAATCCGAGGGACAGAGTGGACCAGTTTGGTATACGCTTGATAGTACATCAGGCCAGGTGAATGATACGTACAGAAACCGCTTGGTCTCTTAAGCTACATTTTTATATTCAGTTTTCTTATTGTAATCTTTATGGTCAGGTGTGCCTACATATTAAGGCAATCAAGGTCCATGAGAGTTCATCGAGGTCAGGCCTTGCTCTTTCTTTATTCATTATTGTTTGATGTTTCTACAGACTTTGTTCTTACCTGTAGTTTACTTTAAGTGTGAAACTGTTATTCAGAGTTTGTACGAATAATCAGGTTTTAAACAGTTTCGAACTTGGTTGCTTTTATTTTAGTTTGCCCTTTCAGATGACATTATATATTTTTTTTGTAGTGTTCAATATGCTAATAGTTTTGTTTAACCGTTTCCAACTATCATTTTGATATTTGACCCATTGTTGTATTATATTGCCAACTATCATCTTGTTAGTCTTAGCCTTTATTATTTGTTTTTTAGGGCTCTAAATAGCTCTGCTGAGGCTGGTGCTCGTAGAAGAATTTCCTTGGATAAACAAGGACCCACTGTAGTTCATCAAAAACCAAGTCATTTGCAGACGATATTTGGACTTCCTCCAGATGAGGTATGTAACTATCTGAACTATTCTTCTTGTTTTTATGCATAGAAACACGATTCCTAATGGCAAGTTTTACTTGTTCATTTCTTTCCCCTTTGTCAGGTTGTTGAACATAGTTATTCATGTGCACTTGAGAGGTCATTTCTGTATCACGGGCGCATGTATGTCTCTTCATGGCACATTTGCTTCCATTCAAACGTCTTCTCTAAGCAGATCAAGGTTAGCTCATATACAGATTATTTTAGTTGGCATCCTTCCGTTGATGCAATTAGTTTAGGTTCTATATTTCACTTCATTTTTATATTATGTTTATCAGAAATCATTCAGTTATTTTGAATGTTCTGCTGATTTTACCAGCGGTTTCCATCTAAACAAGATAATAGGATACATGACCTTTGTGACTATCAAAAAAAGGATAGTGGAGTAAATGTGGATAATTAATGCGTTCACTTTTCAGGGTTAACAATAACAGCACAATAATGCTATTTTTGTTTATGTAGTTTTTGGTTAAATCTTGTTATAACCATGCACTTCTGATTGAGTTCTTACAGAAAAACCAACAGAATATCAGCAAAATCTTCCGATAGATCATTGGAAACTAAGCATTGCACCTAAATGGTTATCACTGTTGCAAGATTTCCATACTAACTGTTATGCTTTAGTTCTATTCCAAAATCCTAACCAGTGAAGCCACCGGTCCTGGTCTGGCGATTATCTGATTGAATTAGATTTTTGTAATTGATTTGTAGTTTACGAGCTTAGGAAAATTACACTGTGCCAGATGGTTTGTCTTAAAAATAAGTCCATCTATTATCATTTACTTCAGTTGATATATATGCTTTACTCATGTAACTAACAATTCTTTTCATTTTTATGAAGGTTATGCTTCCGTTGAGGGATATTGATGAGGTGATTACTATACTATTTCCTGTGATCTCTTCATGATTTCTTGCTGCACATGTTAATTTGCCTTTTCTTTCTGTTATTACAAGTACTGCAGATAAGAAGAAGCCAGCATGCAGTTATTAATCCAGCAATCACGATATTTCTTCGAATGGGAGCTGGAGGACATGGGGTTCCTCCCTTAGGAAGTCCCGATGGTAAGCTCTAACACTAGCAAGTCTGCACCTTTGCCTCTTCCTCTTTTTAGCACTACATGGACAGCAGTGCTAACTCAAAAGTTCATCTTGAATTATATTATTTGGATCCCACTTCATGCTTCTCGCTCTCAACAGCAAAACATGTTGTTGGTATTACACTATTACTCATAAGTTAGTGTAAATTTGAGTGCTGTGAAGGTTTGTTACTACTTACCGGACTAAATTACATGCCTCTAGCTTGCTTGAGAACTGAATGCATGCATATCCTAAATTGAGTCGTATATTTTTCTTGATGCAACAAAATTGGTAGCAAGCTAGAATTGCATATATGTGGATAAAGCTAAATGGTCATTATTGAAGCAGATCAATACCCTTACAATGGAAAGAACCGATAACCAAAGTTTAGCAAAGATATGGCAATTTTTTTGGAGACAGCCAAAGGACTGGAAGACGTAAGATTTGATACATGACGAACTGCTTCATGAGTTCATAACACTCTGTTTATGTATATTTCTGCAGGAAGAGTCAGATATAAATTTGCATCATTTTGGAATAGAAACCATACATTTAGAGCATTGCAACGAGCTGTCAAGAACTTCCATACAATGATAGAGGCTGAGAAACAGGTACTGATCATGTATATAGGTGTAACACCCTAGACCTTTACTCTTACATTATTCCTCGAAGTTTGGATATTAATCTTTATGAGGCATTTTACATATTTGCTGTCTTACTGTCAGTGAACTTTCTACAAATATGATATCTATAAGTTGGATCAGAATTGATAATCTGTTTTACATTTGGATTTTGAATTCTAGGAACGTGCTCAATCTGCATTACGTGCACACAGTAGCTCAAGAAAAAGTAGCATGAAGGAGATAAATGTTCCAGAAGATTGTGCTGATTTAACAGGCCAATTACAACCTTTTGTCAAAGAGGAAGTTCTAGTCACTGTATTCAATGTAATAATGTCTAACTGTATATTTGCTTCAGGAATATGTAGTTTATGACACGGCTGATGTTTAACTCTGACTCTATCTAATTTCAGGGATCTTTTCCATGTACTGCAGAGGAGTTCTTTAATACTCTGTTAAGTGATGATTCAAGTTACATCACGGAATTTCGGACAGCTCGAAAGGATAAAGATATCAATGTAAGTCTGCTGATGATACCTCACATCCAAGTAGATAGTCGTACTAAATTGGCAATTCATTAGTTGATAACCCTAATGGATGTTGATCTAGTTTCGAAAAGTTGTTGGTTTAAAACTTTTAACCGGAGCTTTTCAGCCAGTGTGAAGGAGGTGAATATGTGGCTCTGCTGAACTTATGGCATTGTGTTACTGATCTCAATGGGGGTGCACAGCTGACTGAGAACCAGTATATGAGACCTATTGGCAGCCAGTCTCATTAGTTTTTGTGGGACTGAAAGGATTACGTATTTACAGTAGAGATTGGTATGCTATATGCTAGTCTAAACTCTAAACTATAAACGTGTGTTGTCCATCTTCCATGCATATTTTGATAGTTGGTAAGCTTCCATATTCTAGTTTTATGCTAAGTCTGGGTAAGATGCGCAAACCGATTATTGAATAACTGAATCTGCTAGAAAGGATCGCAGAGGACAGTAGTATCTATCTTTTGCTTTAACAGCACTCAGCAGCCTGAGGGACTATGGGTTCTCTTGGCATTATAGCCTACTAAAAATGGTTTCATTCTGCAGTTAGGTCAATGGCACCACGCTGATGAGTATGATGGTCAGGTGAGGGAACTTAATTGCAAATCAATATGCCATAGTCCAATGTGCCCCCCATATTCAGCAATGACAGAGTGGCAACATATGGTTCTTTCAGCTGACAAAACAGATCTGGTACGTTTCTAATGTGCAGCTGAATGTTCCTATATGGCTTGATATAATAGTTCATGAAGCACAGCAATTCCTATATATTATCTGTACTTTATATCATAAGTAGTACTAACTTTTGCTGTTTACTTATAGGTATTTGAAACTGTACAGCAAGTACATGATGTTCCATTTGGTTCCTTCTTTGAGGTACTTGTTGTTGTTGGCATAGTTGTTATGGAATATATGTGGTTTTGTTAATCAAATGGCAATATTGCTGACACCTCTTCAAACATGATGCCTATCGTAAATTTACTGATACATTACTATAATTGACTATCATGCTGCTTTTCAGGTACACTGTAGATGGTCTGTGAAGACTACCAGTTCTGACTCATGCAGTCTTAACATTAGTGCTGGTTGGTGCATTTCTTTTATCCCATTACAGTTGTTATAACTTATGCTCCTTATGATGTATTATGATTTTATTATTACTAATGCATGATCGTTTTTGCCATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGTGCATAATGCAGTCGAAGATAAAGAGTGGTGCTGTGGACGAGGTATGCTCTTCTCTATTATTACTGAGTTCCTGCATCAACTATCTGTTGATGAGTTTGTCAATAAGCTCACTGTAGTAAAAATGTGAAATATTAGTATTAAAATAAATGCAGCGAGGTATGTACTATAGAATACTACATCCGTCTAAAAAGACTTCATTTTTAGCTATTAATCTGGACAACTCATTTTTAGCTATGAATAATCTGGACAAGTTGTCTAGATTTATAGCTAGAAATGAAGTCTTTTGGTACGGAGATAGTAGCTCACATAACAGATGGCCAGACAGGCAGACAGTAGTCATGGGCCCAGAAACACCAGTTTAGACATGATCAGATCCATAAATAGGCACCCAAAAAAGTTGATCTAAAATAGATTTTGTGGTCATCTGTTATTAGCTGGCCTGCTACGGATGAATATTTTCACCGGAATTGTAAAAAAAAAATATTTGCACCGGTTTGCATATTGAGAATACAAATGAGCTTCATCTATCCGGTGTTTGAATACAAATCCTCATTAAATCATGGCGATAGCATTTGCTAGTAAACTTATGTAATAGTAGCTTTTTACTGGCTTACCCTTAGCATAGGATGTTGCAGTTACCTAGGTCTTTCAGGCCAAAATGTGAATTATGGATGCCCTGAACAGTGATGTGATTTCTGCATATTTCAAAACAATTCTCTCTTTTAAAATCTTGCAGTACAAGAAGGAAGTCCAGGAGATGTTGGAATTTGCAGAGTCGTATATGCGCAAAGTTAGAACTTCTAACCAAGACAATGGTAGTACACCTACTGAGCAAGACAACGGCGCTGTGACTGAGCAAGAAAATGTGGCGCCGGATAATACACCAAATGATGAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029434