Difference between revisions of "BGIOSGA029720"

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(Created page with "{{IndicaGene| GeneName = BGIOSGA029720| Description = Glutamate receptor| Definition = Oryza sativa Indica Group BGIOSGA029720, complete gene.| tag = OsI_31453| tid = BGI...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA029720|
 
GeneName = BGIOSGA029720|

Revision as of 17:19, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA029720

Description

Glutamate receptor

Definition

Oryza sativa Indica Group BGIOSGA029720, complete gene.

LocusTag

OsI_31453

Ensembl Transcript ID

BGIOSGA029720-TA

Ensembl Protein ID

BGIOSGA029720-PA

Length

6510

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:14116487..14122996

Sequence Coding Region

14122714..14122996,14121131..14121334,14119074..14120413,14118413..14118662,14117358..14117764
,14116487..14116945

Genome Context

<gbrowseImage1> name=IndicaChromosome09:14116487..14122996 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:14116487..14122996 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGAGCTCGTCCAGCTCGCCGAGTCCATGTGCCAAGCCGCCTCCCTCCTCCTGGGTGATGACGACCCCTCCGACGAGTCCAGCCCGCGCCGCCCCTCCACCTTCCTCAACGCCGTCGACGTCGTCTTCTTGCTCACAGCGGCGGTCGCGTCCGCCGTCCGCGTCGCCTCGTGCTCCCACCGCGTTGGACGCCATCGACGAGGCCGTCGGCAAGCTCAAATCCGTGGAGAGCCACTGCAGTGGGCGGCGGCGGCGGCTTCAGTGGGATTCCGTCCAGGAGCTGATCAGGATACCACCAGAGGTAGAGCAGAGGAATTCCATGTTGGTGTGATCCTGGACCTGGGATCACTGGTGGGCAAAGTGGCGCGAACCAGCATTTCGTTGGCAGTGGAAGATTTCTACATGGTCCACAGGAACTACAGCACAAGGCTGGTTCTCCACTTCAGGGATTCCATGGCCAGTGATGTCCGAGCTGCATCAGCAGCTGTTGATTTACTGGAGAACTACAAAGTGCAAGCTATCATTGGCCCCCAGAAATCATCAGAAGCTGTATTTGTATCCAATATCGGAAATGAAGCACAAGTACCTATTGTATCCTTCACAGCAACAAGTCCCTCCCTCACTTCTAATAGTATGCCATATTTTGTGCGTGCAACATCAAATGACTCAGTCCAAGTGAATAGTATTGCATCTCTAATAAAAGCTTATGGATGGAGAGAGGTGGTGCTGGTATATGAGGATACTGACTATGGGAGAGGAATTCTACCCTACCTCATTGATGCTCTTCAAGAAATTGACGCCCGTGTTCCATACAGGAGTGTCATCCCTTTTTCAGCAACAAGTGAAAACATTCAGGAGGAACTCTACAAGTTAATGACAATGCAAACAAGGGTATTTGTTGTTCACATGTCATCCACTACGACTTCTCATCTCTTTACAAAGGCCAAAGAGGTAGGGATGATGAACAAAGGATTTGTGTGGATTATCACAAACGGAGTGGCAAACATCATTGACTCACTCAGCCCACCTGTCATTGAGGCAATGAATGGTGTAATAGGAGTAAGGTTTCATGCACCAAAAACAAAAAATCTTGATAGGTTCTCCATAAGATGGAACAGAATGTACCAACGAGATAACCCAGACGAATCACCATTTGATAAATTAAGCATTGTTGGACTGTGGGGCTATGATACAATTTGGGCATTAGCACAGGCAGCAGAAAAGGTTGGAATATCCACTGCCAAAAAGAGGAAACAGATTCCCAGTAAAAACTCCACATGTCTGGAATCCATGGTTATTTCCACAAATGGCCCAGATCTCCTAACAACAATTGTACAGAACAAATTTAGAGGTTTGAGCGGTGACTTCGACCTTACAGATAGGCAGTTGCAAGTCTCCATGTTCCAAATAATAAATGTGGTTGGGAGAGGTTGGAGAGAAATCGGGTTTTGGACTGCAAAAAGTGGCCTTTCACAACAGTTAAACCAAACTGGCTTACAAATAACAGGTACGGCCTCAAAGCTTAATCTAAATCCAGTAATATGGCCAGGGGAGTCAACAGAAATACCAAGGGGCTGGGAATTTCCTACAAATGGTAAGAAGCTTAGAGTTGGTTTGCACACAAGTGGATATCCAGAGTTTATGAAGACCATAAAGGATCCTGTCACAAATGCAACAAGGGTGAGTGGCCTTTCAATTGACATATTCGAGGAGGTGGTAAAGAGGCTACCTTTTGCACTTACTTACGACTATCTAGCATTTGACACAGAAGATACAGCAAGTACATGGAGTTACAATGATTTTGTGTACCAGGTTTATCTTCAGAATTATGATATAGCAGTTGGAGACATAACAGTCAGATACAATAGAACATCTTATGTGGACTTCACTATGCCATATACTGAATCTGGAGTAGCAATGATTGTTCCAGTCAAGGAAAACAAGAACAATGATATGTGGATATTCTTGAAACCTCTAAGCAGAGGGATGTGGTGTGGAAGCACCATATTCTTTATTTATACAGGGTTTGTTGTCTGGCTGCTGGAGCGTCTAAATGGAAATGGACATCTACATGAAGATAAGCTGGAACGCTTTCTATCCCGATTAGTTCTACTTGTATGGATGTTTGTTCTTCTGGTACTTACATCGAGTTATACAGCAAGCTTTGCATCGATGCTTACTGTACAACAGCTTTCACCGGCTGTGAATGATGTTCATGATCTCCAGAAACAAGGAGAATATGTAGGGTTCCACCGTGGATCCTATATAGAGGGTCTACTGGAGGATATTGGTTTCGACAGATCAAAGATCAGGCCCTTAGATACACCAGATGACTTCCACAGTGCTCTTTCTAATGGAAGCAAAAATGGTGGTGTTGCTGCACTCGTACTTGAAGTGCCATACATCAAATTGTTTCTTGCGAAGTACTGCCAGGGTTACACAATGGTTGGACCTATTTATAAGACTGCAGGTTTCGCATTTGCACTTCCCAAGCGTTCTCCTCTACTGACAGACATATCAAGGGCAATACTCAACATAACAGAAGGAGATGCTATCATTCAAATCGAAAAGAAATGGATTGGACAAAATAGCTGCCAAAATGATGATAAAGTCGGTGGTTCAGGTTCCATCACTCTTGGTAGTTTTGGGGGATTATTCCTCCTAACTGGAGTTGTCACAACATGTTCACTTATTATAGCCTTGTTGACAAACTGGCACAACACAAATCAAAAGTCAGGGACCGAAGGAGATGATCAAAACCAACACAGACATGGGGAAAAGAGAGAAAATGGGCATGCTCAAGGAGATCAAAAGAATGAAGACAACAGAGACTACAGTGATACAGAAAACCAAACAAAATTATCAGTTCCTCAAAGCTTAAACACAAATGATGATGAGATGAGGGACGACCGCCCAAAAAATAGCAATCTGACATTTTGA</cdnaseq>

Protein Sequence

<aaseq>MDELVQLAESMCQAASLLLGDDDPSDESSPRRPSTFLNAVDVVFLLTAAVASAVRVASCSHRVGRHRRGRRQAQIRGEPLQWAAAAASVGFRPGADQDTTRGRAEEFHVGVILDLGSLVGKVARTSISLAVEDFYMVHRNYSTRLVLHFRDSMASDVRAASAAVDLLENYKVQAIIGPQKSSEAVFVSNIGNEAQVPIVSFTATSPSLTSNSMPYFVRATSNDSVQVNSIASLIKAYGWREVVLVYEDTDYGRGILPYLIDALQEIDARVPYRSVIPFSATSENIQEELYKLMTMQTRVFVVHMSSTTTSHLFTKAKEVGMMNKGFVWIITNGVANIIDSLSPPVIEAMNGVIGVRFHAPKTKNLDRFSIRWNRMYQRDNPDESPFDKLSIVGLWGYDTIWALAQAAEKVGISTAKKRKQIPSKNSTCLESMVISTNGPDLLTTIVQNKFRGLSGDFDLTDRQLQVSMFQIINVVGRGWREIGFWTAKSGLSQQLNQTGLQITGTASKLNLNPVIWPGESTEIPRGWEFPTNGKKLRVGLHTSGYPEFMKTIKDPVTNATRVSGLSIDIFEEVVKRLPFALTYDYLAFDTEDTASTWSYNDFVYQVYLQNYDIAVGDITVRYNRTSYVDFTMPYTESGVAMIVPVKENKNNDMWIFLKPLSRGMWCGSTIFFIYTGFVVWLLERLNGNGHLHEDKLERFLSRLVLLVWMFVLLVLTSSYTASFASMLTVQQLSPAVNDVHDLQKQGEYVGFHRGSYIEGLLEDIGFDRSKIRPLDTPDDFHSALSNGSKNGGVAALVLEVPYIKLFLAKYCQGYTMVGPIYKTAGFAFALPKRSPLLTDISRAILNITEGDAIIQIEKKWIGQNSCQNDDKVGGSGSITLGSFGGLFLLTGVVTTCSLIIALLTNWHNTNQKSGTEGDDQNQHRHGEKRENGHAQGDQKNEDNRDYSDTENQTKLSVPQSLNTNDDEMRDDRPKNSNLTF</aaseq>

Gene Sequence

<dnaseqindica>1..283#1663..1866#2584..3923#4335..4584#5233..5639#6052..6510#ATGGACGAGCTCGTCCAGCTCGCCGAGTCCATGTGCCAAGCCGCCTCCCTCCTCCTGGGTGATGACGACCCCTCCGACGAGTCCAGCCCGCGCCGCCCCTCCACCTTCCTCAACGCCGTCGACGTCGTCTTCTTGCTCACAGCGGCGGTCGCGTCCGCCGTCCGCGTCGCCTCGTGCTCCCACCGCGTTGGACGCCATCGACGAGGCCGTCGGCAAGCTCAAATCCGTGGAGAGCCACTGCAGTGGGCGGCGGCGGCGGCTTCAGTGGGATTCCGTCCAGGAGGTCGTGGATAAGGCGCCGCCCCGGCTCCCGCCGCCGCGTCGCCGGCCGCCCTGGCGTCCTCCTCCCCACCCTCCCCGGTAGTTGCCCGAGAGGAGAAGTGAGAGAAGAGGGGAAGCCGCGTCGCCGGTCGCCGTCGCCTGTCAGAGAGAACGGAGAGAGAGAGAGAGATGAGGGTGGGAAAGAACAGAGAAGAGAGGAAAAGAGAGAGAAGGCTTACGTGGCAATGCTGACAGGTGGGGCCCACGTGGGGCCCACGCTGACTCACCCGCCACGTCAGACAAAACCAGGGTCAAAACCACCCTAGGACCTCAAGCGAACGGTTTTGTTAGTTCAGGAACCTCCGGTATCCGGTTTTGCGGTTGGGGGATGATTTTGTAACTCGATGACAAGTTGAGGGACCTTCGGTGTACTTTTCCCTACTTACTACCGTTATTTAACTGGGCCGAGATACGGTGGAGATAGTGGGCCTAAAGCCCAAGTGCTGGATTTTTTTTGTTGCATCAACAAGTCCAGTCCAAGCCCAGACGAATATTTGAGTCCGCACAAAGGCACATGCAATGTCAAATTTGAAATGAAAATTTCGTCATTCACATTGACAATTCTTTTCCCTTTCCTTAAAAAAAAAAAGACTAAAGGTGACCCTGAATGTACCCAAGCACCCAGCCTTGCGTGACGTTCAAAACTTCAAATCCCCGAACTCCCAAGTCCTGACGCATCATTTGTCAACACGCGCTTCCGCTTCAGGGAGCGCATTTAATTTGTTGACCCTGAGAACTTGCCAGCCAAATGAGCTGCTACTACAAAAAATGAACACGGAAAGTCTTGTGAATTGTCAGGCAGGACAAGCAATTACTTCCTCCGGGTTGATAATATTTGTCGTTTTGGATAAGAGCACGGTCTCCAAAAAACAATTTTAACCATTGTTTTCTATTATAATATGTATAAAAGTGTTAACAAATATATGATTTTATTAAAGTATTTTTTAAAACTAATCTATACATATAGTCACCATATTTGAAAGACAAATATTTTATAAATGATTCATAATCAAATATTCTAAAGTTTGATCTCGCCCTTGTCTAAAACAATAAGTATTATCAGCCCGGAGGGAGTAACCAAATACTAGCACTGAAATCAAACTGTACCTGTCAGTCTGTCACTGCCAAGTGATCTAACATTGCAACTTTCGGCTTGACCAATGGCACCCATATTAACTACATTCGGGAGACTAATCCTAGGCAGGAGATCCTATAAGAGAGTGCAACTCAGAACAAAGAGGCTTTGCATACCTTGCAGAATACAGACTACAGCAGCTGCTGTAATGGAGAAAGCACCTCATTCCATCCTCTTCTTGTTACTAGTTGTGAATTTCTGTGCAGCTGATCAGGATACCACCAGAGGTAGAGCAGAGGAATTCCATGTTGGTGTGATCCTGGACCTGGGATCACTGGTGGGCAAAGTGGCGCGAACCAGCATTTCGTTGGCAGTGGAAGATTTCTACATGGTCCACAGGAACTACAGCACAAGGCTGGTTCTCCACTTCAGGGATTCCATGGCCAGTGATGTCCGAGCTGCATCAGCAGGTATGTGTCCTGCACTGAATTGTTGACAGATTGTCATGACAACCATAGAACATTATTTGCTACTTTCATTGATATAGATAAAGGAAAACTGGAGTACTTTTTATGAAGAATTTTAGTACCTACAGGTGTACTTTCCTAAGGACCGCCCCACGGCACTGGCTATAAATGAAGAACTACAAAAGACATCATTTTTATTTCATCCAAAGTATAAAATAAGTAAGCTGTGAACGTACGGTACTACAAAGACATCAACATTCATCAATAAGATTCTAAATTAAATAGCAACCAAACCTAATTGCATCAAAATATCCCATTGCAGTTCTACTAACATATTGTTTCCACAACATGCAAGTAGTACCAAGTCACAGGTGTGTCACAACATGCAAATCATCACCATGTCTACATAATCGTTCACATAGTTTAAAAAACAACTGTTTATTCAGCAAATAGAAGCTTAATTTGGTAAGTATCATAACGCCTTGCGCATGTGTGCAGTGTTGAATATTGCTTTTTTTTCCTTGCATTTTTACTGTTTAACTTATGAGAAAGGAGCATAGAGAGAAGCAGCTGACTAGCTAGGCATGAATTACTAGATTAACTTACAGTCCTTGACAAAACATACTCTTATCCAAAACATAGTTTGTATTAATCTGATTTTACAACCTTGGGATCATTTTGACAAAAAATCCCCCCTTCTTTTCTGATGCAATTTTGAAGCTGTTGATTTACTGGAGAACTACAAAGTGCAAGCTATCATTGGCCCCCAGAAATCATCAGAAGCTGTATTTGTATCCAATATCGGAAATGAAGCACAAGTACCTATTGTATCCTTCACAGCAACAAGTCCCTCCCTCACTTCTAATAGTATGCCATATTTTGTGCGTGCAACATCAAATGACTCAGTCCAAGTGAATAGTATTGCATCTCTAATAAAAGCTTATGGATGGAGAGAGGTGGTGCTGGTATATGAGGATACTGACTATGGGAGAGGAATTCTACCCTACCTCATTGATGCTCTTCAAGAAATTGACGCCCGTGTTCCATACAGGAGTGTCATCCCTTTTTCAGCAACAAGTGAAAACATTCAGGAGGAACTCTACAAGTTAATGACAATGCAAACAAGGGTATTTGTTGTTCACATGTCATCCACTACGACTTCTCATCTCTTTACAAAGGCCAAAGAGGTAGGGATGATGAACAAAGGATTTGTGTGGATTATCACAAACGGAGTGGCAAACATCATTGACTCACTCAGCCCACCTGTCATTGAGGCAATGAATGGTGTAATAGGAGTAAGGTTTCATGCACCAAAAACAAAAAATCTTGATAGGTTCTCCATAAGATGGAACAGAATGTACCAACGAGATAACCCAGACGAATCACCATTTGATAAATTAAGCATTGTTGGACTGTGGGGCTATGATACAATTTGGGCATTAGCACAGGCAGCAGAAAAGGTTGGAATATCCACTGCCAAAAAGAGGAAACAGATTCCCAGTAAAAACTCCACATGTCTGGAATCCATGGTTATTTCCACAAATGGCCCAGATCTCCTAACAACAATTGTACAGAACAAATTTAGAGGTTTGAGCGGTGACTTCGACCTTACAGATAGGCAGTTGCAAGTCTCCATGTTCCAAATAATAAATGTGGTTGGGAGAGGTTGGAGAGAAATCGGGTTTTGGACTGCAAAAAGTGGCCTTTCACAACAGTTAAACCAAACTGGCTTACAAATAACAGGTACGGCCTCAAAGCTTAATCTAAATCCAGTAATATGGCCAGGGGAGTCAACAGAAATACCAAGGGGCTGGGAATTTCCTACAAATGGTAAGAAGCTTAGAGTTGGTTTGCACACAAGTGGATATCCAGAGTTTATGAAGACCATAAAGGATCCTGTCACAAATGCAACAAGGGTGAGTGGCCTTTCAATTGACATATTCGAGGAGGTGGTAAAGAGGCTACCTTTTGCACTTACTTACGACTATCTAGCATTTGACACAGAAGATACAGCAAGTACATGGAGTTACAATGATTTTGTGTACCAGGTTTATCTTCAGGTAAAAATAATACCTTATGAAAGACAGCTTCCAGTTTCTCAATCTTCCGACTGAAAAAACTATACATGAATTTTACTGTAAAAACAACTCTAGGAGTTCAAGCAATTTCCAGTTCAATCATCAAACATTAAGTTCAAATCCATTTTTAGCAGCCAAACTTTCATATGGAGCAATTTAGGGCTTGAACTGGTTTAGTTGTGCACTACATTAGTAATTGTTAAGGCAAATCAAAAGTCTATGGAAAGCTTTTTTTATTCAGAAAAAGTATAAAAAAATTGATCTTCTCCTGTTAATTGAACAGTTGAGCTTTTGCTATACCTGAAATTTAGAAAGAACATAAAGAGGAGAGATAGCAGTTTTTCTCTTTTTCTCTTTTTGATTGCTCAAATGAAACTATCTTATCCAATGCAGAATTATGATATAGCAGTTGGAGACATAACAGTCAGATACAATAGAACATCTTATGTGGACTTCACTATGCCATATACTGAATCTGGAGTAGCAATGATTGTTCCAGTCAAGGAAAACAAGAACAATGATATGTGGATATTCTTGAAACCTCTAAGCAGAGGGATGTGGTGTGGAAGCACCATATTCTTTATTTATACAGGGTTTGTTGTCTGGCTGCTGGAGCGTCTAAATGGAAATGGACATCTACATGGTCCCTTTTCACTCAAGCAACTCGGAACTCTGATGTTTTTTTCCATATCTGAAGAGAGTTGAGTACAACAGAACCATTTCAAAAAAAATATGACTCTGATTTTAAATTAGTAGTATATCAGTGGATACCAAAATTAAAACTGGATATTTTGCATATACAACCATGTGCGGAACCACATGACAAATAGAAAGACTGCAATCTGACTAAACCACAATGCCACAAGATTCTGGAAGGAAGAGTGCACTCCATAGCCATATATTATTGATTTTATCAAAACTTTTTCCAAAACAAATCTTAGATCTGTCAAAACCATCTCAATTTTAATTAGCATTTTTTTTTAAGAAAATGCAATAATAATCAATGGAGTACTGAAGGAAAAATAAAGATAAAAATATGTTTTTATTTTTGAAATATATTGAGATGATACATTTGTTGTTCTTAACTGCACTTAATTGGCAAGATATATTCTATTTCAATATTCTCCTCTGTTTCAATATTCACCAGTCAGTAAGACCCGCATTTTATCAAATAAAGAAAAAGATATGCTTGCTTTGCAACAAGTCCCTAAAAGACATGCAGTAACTCACATTTGAAAATTCATTTAGCATGTTCCAAAAATAACCTCTCTCTTGTTAATTTGTTATGCAGAAGATAAGCTGGAACGCTTTCTATCCCGATTAGTTCTACTTGTATGGATGTTTGTTCTTCTGGTACTTACATCGAGTTATACAGCAAGCTTTGCATCGATGCTTACTGTACAACAGCTTTCACCGGCTGTGAATGATGTTCATGATCTCCAGAAACAAGGAGAATATGTAGGGTTCCACCGTGGATCCTATATAGAGGGTCTACTGGAGGATATTGGTTTCGACAGATCAAAGATCAGGCCCTTAGATACACCAGATGACTTCCACAGTGCTCTTTCTAATGGAAGCAAAAATGGTGGTGTTGCTGCACTCGTACTTGAAGTGCCATACATCAAATTGTTTCTTGCGAAGTACTGCCAGGGTTACACAATGGTTGGACCTATTTATAAGACTGCAGGTTTCGCATTTGTAAGTTTAACTACGCTCTCAAGCACATTTACTATTAAGCTGCCTAGGAAGATTTAGACAACCATTCAGATGTTATCTTCATATGCTATTTACATTCAAAGTTTCAAACTCGATGGAATGGTCATCTAATATATTTACAAGTGGATGGATACATGTAGAAAAGAAATAATTGCCATCTAGCTTCATTAACAAGGACAGACAGGGAGTACATAGCAAAATAATTATTGCCAATGCTTCAGTACTCTGGATATGATAATCTTAGAGCGAGAGGCTAGAAGCCACAAGCACAGATCAATCACGCTAAAAAGGTTCTACCTATCAGGAATTAGTGCTATCTGTTTCTTACTGAATCCTACAGTACCCAACCTCTCGGTTTGTGCAAGCTAATAAGAGTTCTCTCTTTGGTGATTAGGCACTTCCCAAGCGTTCTCCTCTACTGACAGACATATCAAGGGCAATACTCAACATAACAGAAGGAGATGCTATCATTCAAATCGAAAAGAAATGGATTGGACAAAATAGCTGCCAAAATGATGATAAAGTCGGTGGTTCAGGTTCCATCACTCTTGGTAGTTTTGGGGGATTATTCCTCCTAACTGGAGTTGTCACAACATGTTCACTTATTATAGCCTTGTTGACAAACTGGCACAACACAAATCAAAAGTCAGGGACCGAAGGAGATGATCAAAACCAACACAGACATGGGGAAAAGAGAGAAAATGGGCATGCTCAAGGAGATCAAAAGAATGAAGACAACAGAGACTACAGTGATACAGAAAACCAAACAAAATTATCAGTTCCTCAAAGCTTAAACACAAATGATGATGAGATGAGGGACGACCGCCCAAAAAATAGCAATCTGACATTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029720