Difference between revisions of "Os10g0548200"
(Created page with "{{JaponicaGene|
GeneName = Os10g0548200|
Description = Tetratricopeptide-like helical domain containing protein|
Version = NM_001071834.1 GI:115483263 GeneID:4349298|
Leng...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os10g0548200| | GeneName = Os10g0548200| | ||
Revision as of 21:12, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os10g0548200 |
|---|---|
| Description |
Tetratricopeptide-like helical domain containing protein |
| Version |
NM_001071834.1 GI:115483263 GeneID:4349298 |
| Length |
7561 bp |
| Definition |
Oryza sativa Japonica Group Os10g0548200, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 10:21901299..21908859 |
| Sequence Coding Region |
21901475..21901662,21901743..21901946,21902109..21902752,21903004..21903243,21903339..21903433 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008403:21901299..21908859 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008403:21901299..21908859 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgcctgaaaaggcggcggaggccaacctccgcaagcagctggagcaaaccctcgccggcgagccatccagcccgctccaccactacaacctcggcgtcttcctatgggaccgcgcggaggcggcggcgagggaggagggcgaggaggaggaggaggtgaggcggctccgtgcggcggcggccgagcgcttcctcgcggcggccaagctggaccccaacgacggcgtccccttccgcttcctcggccaccattatgcgcttgccggcgacgcgcagcgagcggccaagtgctatcagcgggcggcgacgctcaaccctgatgatgccgaggctggggaggcggtctgtgatttgctagatttggagggcaaggaaagcttggagatcgctttgtgcaaggaggcagctggcaagtcaccccgggcattttgggcgttccggaggttggggtacttacaggttcatcagaagaaatggtcagaggctatacagagccttcagtatgcaatacgaggttacccaacatgtgcagatttatgggaagcactcggtctggcataccaccgtttgggcatgtttactgcagcagtaaagtcgtatgggcgagctgttgaactggatggttccaaggtctttgcgttgatagaaagtggaaacatccagctaatgcttggttattttagaaagggtgttgaacagttccgctctgccttggagatggctcctcaaaatcattccgcgtactttggtcttgcttctgcattgcttgcttgggcaaggcagtgtgtaatgactggggcctttggctgggcagctagtctgttgaaggaagcatgcaaagctgccaaagtttgtacttctttgactggaaacctttcctgtgtttggaaactgcatggagatgctcagctcgcacttgcaagatgctttccatggggtgatggtaatatcaaggggggtatggatgatggtactttcaggactactgtacttgagtggagaaatacatgtttgttggctgcaaatggtgcaaaattctcataccaacgagctttgcatctcactccctgggaagctaatattcacaatgacactgctatatgtcttgatctcatttataccattgaggagaataatagtctagatcccataacttgggaactgccagagaaaatgtcgttgggtgggttgatactggaaccagtcaataaggatttttgggttacattgggctcggtgtcaagtaatcaagctttaaaacagcattcttttatcagagcactgcatcttgatatgtctctctctgaagcttgggcataccttggaaagatttacaggcattcaggtgataagcagttggcaagacaagcatttgatcgagctcgaagcattgatccttcactggccttgccatgggcaggaatgtcagctgaaaattaccaccagcctggggatgggccagtaaatgaatgttttgaaagctgcttgcgggctgtgcagatacttcctcttccagagttccagattggtcttggaacaattgctgctcgttctggtgaacttctatcacctcaggtattgatggctgtaaggcaagctgttcaacgggcacctcattaccctgagtcgcacaacataaatggcttggtttctgaagtgcgatcagacttccaatctgcaattgcatcgtaccgacaagcaaaatttgctttagatatgatgcgcaactccaaaacagactgcagatgtcatattgctgatatttccgtgaatcttgcccggtcactatgtaagactggtcttgcaactgaggcagtgcgggagtgcgaagaattgaaaagacaaggatttctgaatgatgacggattgcagatatatgctctttcattatggaaacttggtcggcatgatgaagctctttcagtatcaagaaacttggctgaaaacttatcgagtatgaagcaggagagtgcaactgcagctttaggattcatatgcacgttgacatacaacatctctgggaaggactctgcagctgcggtcattcataaactgcctggtcaactcaattacagcacacagctgaaatttattatctctgcattagatgctttacagccaaacaagcgttttcagttaccccagctgagtatgcctcctaggcttacatcgtatgaagtcatgagtgaagtccactcaaatattgctcttggaaatgctattggtggggaatcagacaagtttttaagggttgatggtggcctgtcttacctgaaaaaggttctacacatgtatcccgactgcagtttagtaagaaaccaacttggatctctgctactgtcaagtgaagattggatggcttctcataaagcagtaagggttacttcattgtcccggggatatacatccaataggggcttaagatctccacaccaaattcaagcatgtgcagcagtttcttgctatgctacctgcacttcttacccaaagttctcttttccaacatgtgaagatcaatacctaagcggatacaatgcaatatgccgcctgcaaaggtgggttcatctagaaccgtggaaccaagatgcacgtcgcctccttgtacttacccttttccaaaaagcacgtgaagaaaagtatccgaaacatatctgcaccattttgaagaggctgattttgcaagttctctccagtggtagcaattcacaagacaataaggtggttcagtatgggaactacttgttacttcttgtggcttcagaggttagtttgcaatctggtgaccatggcaactgtattgctcaagctactgaagctcttggagtaacttcttcgagcgtggattctttctttgcacacttgcaactgtgtcgggcctatgtgatgcaaggcaatcttttgaactctaggagtgagtacatgaaatgcctgcaaaaccgtacagatactgaaattggctgggtaatacttaagcaacttgcatctatatgttcactggagggtacccctgatgaaatagagatacatctcggaggatgcgttgaaaggaaaggtagcaatgcatccaaatggatgtctcttttttatctagcatgcgctcagtgttcagtatggaatgaggactttgcaagtgctgaaaaagctattgctcaggcatgtgctgaaggggatcctgacagctgtgtcttatttctcaacggcgcaatttgtatggacattgcttggaggttcgcggcccctcaatttatagcccgtgcagcttccagcctcagaaaggcacagcagaaatcacttgcttctttacctattgtgtccctcttactggcccaagcagaaggcagccttggctccaaagccaagtgggagaaaaaccttcgtctagagtggttctcatggcccccagaattgaggcctgctgagctctatttccagatgcatcttctggcaacgcagtcaagtgcagcaacttcccagcagaaccagctagtggaaaccatgcaaaccccagagaagtggcttctcagggcgatacacctgaacccgtcgtgctctaggtactggacggctctgatgcaactcgtgtacgtgtaa</cdnaseq> |
| Protein Sequence |
<aaseq>MPEKAAEANLRKQLEQTLAGEPSSPLHHYNLGVFLWDRAEAAAR EEGEEEEEVRRLRAAAAERFLAAAKLDPNDGVPFRFLGHHYALAGDAQRAAKCYQRAA TLNPDDAEAGEAVCDLLDLEGKESLEIALCKEAAGKSPRAFWAFRRLGYLQVHQKKWS EAIQSLQYAIRGYPTCADLWEALGLAYHRLGMFTAAVKSYGRAVELDGSKVFALIESG NIQLMLGYFRKGVEQFRSALEMAPQNHSAYFGLASALLAWARQCVMTGAFGWAASLLK EACKAAKVCTSLTGNLSCVWKLHGDAQLALARCFPWGDGNIKGGMDDGTFRTTVLEWR NTCLLAANGAKFSYQRALHLTPWEANIHNDTAICLDLIYTIEENNSLDPITWELPEKM SLGGLILEPVNKDFWVTLGSVSSNQALKQHSFIRALHLDMSLSEAWAYLGKIYRHSGD KQLARQAFDRARSIDPSLALPWAGMSAENYHQPGDGPVNECFESCLRAVQILPLPEFQ IGLGTIAARSGELLSPQVLMAVRQAVQRAPHYPESHNINGLVSEVRSDFQSAIASYRQ AKFALDMMRNSKTDCRCHIADISVNLARSLCKTGLATEAVRECEELKRQGFLNDDGLQ IYALSLWKLGRHDEALSVSRNLAENLSSMKQESATAALGFICTLTYNISGKDSAAAVI HKLPGQLNYSTQLKFIISALDALQPNKRFQLPQLSMPPRLTSYEVMSEVHSNIALGNA IGGESDKFLRVDGGLSYLKKVLHMYPDCSLVRNQLGSLLLSSEDWMASHKAVRVTSLS RGYTSNRGLRSPHQIQACAAVSCYATCTSYPKFSFPTCEDQYLSGYNAICRLQRWVHL EPWNQDARRLLVLTLFQKAREEKYPKHICTILKRLILQVLSSGSNSQDNKVVQYGNYL LLLVASEVSLQSGDHGNCIAQATEALGVTSSSVDSFFAHLQLCRAYVMQGNLLNSRSE YMKCLQNRTDTEIGWVILKQLASICSLEGTPDEIEIHLGGCVERKGSNASKWMSLFYL ACAQCSVWNEDFASAEKAIAQACAEGDPDSCVLFLNGAICMDIAWRFAAPQFIARAAS SLRKAQQKSLASLPIVSLLLAQAEGSLGSKAKWEKNLRLEWFSWPPELRPAELYFQMH LLATQSSAATSQQNQLVETMQTPEKWLLRAIHLNPSCSRYWTALMQLVYV</aaseq> |
| Gene Sequence |
<dnaseqindica>7198..7385#6914..7117#6108..6751#5617..5856#5427..5521#4945..5318#4750..4801#4363..4581#3918..3983#3749..3806#3534..3655#3043..3214#2702..2949#2544..2624#2332..2472#2075..2167#1934..1984#1747..1830#712..834#370..612#194..274#97..108#gtttcctttccccacacttcatcccccccacttccaccacgccgccgtcgtcgccgccgccgccgccgccggcggtcgcccgacctcgccggcgatatgcctgaaaaggtatcccactctgtccatctctcacttctccatctctctcctcacttcctctggcgctcaccctttttggttttctcctcttcaggcggcggaggccaacctccgcaagcagctggagcaaaccctcgccggcgagccatccagcccgctccaccactacaacctcgtaaccttcgtcatcccgttgcacgaatcctcgccgtggctgcggctctcgctcctccattgcgggcttatcacgcggtagtcgtgtgcgtgcagggcgtcttcctatgggaccgcgcggaggcggcggcgagggaggagggcgaggaggaggaggaggtgaggcggctccgtgcggcggcggccgagcgcttcctcgcggcggccaagctggaccccaacgacggcgtccccttccgcttcctcggccaccattatgcgcttgccggcgacgcgcagcgagcggccaagtgctatcagcgggcggcgacgctcaaccctgatgatgccgaggctggggtgggttggaatgcatatgagcgtgtgcctcgaaggtgtttgttcttttgcctgtgagggtgttttggtatgatatgctgtttgtgtggtttggtgcaggaggcggtctgtgatttgctagatttggagggcaaggaaagcttggagatcgctttgtgcaaggaggcagctggcaagtcaccccgggcattttgggcgttccggaggttggggtacttacaggtatctatctatccttggttggagttgcttgacagcttgagtatattgttgattgaagtaatcatgtccgtaatacttgtgatcaactctggctccacctaaaggggcaaatttgcaaaatattatggcttcattcgatggaatagatccatatggactggttttcaatcacaccatctcagacacacccaaacaaagcctacaggtattagttactgtgatcccaagtcccaacactgttgagataattaaattctgacccaatctagggctagtccaagcttaagtccccatatgcatgcctttcgatttaccaaaatgtaataccattcatatgccattaatatatccagtgccagtttctttcacgccatgaccaccagggtattcaccttccttcacgtcctttagcctcatactagcagatagtattggcgtattggcatgttcctgtcattttggattagttgatagagaatatgtggaaatctataggacaacatggctagtttaggcttgacatttcgcatctctgcaatacctagttttggagccttatctctaatcaaagctgtgactatatcagcctgtcaggcctgctttgatagggagaataggatccaaatccttaggatttgtatcatcccaaaggaaaaagaacaccccgttcttcttcaaaacaaaccctaaattaacaatgtccattgcccagctataatctccaacttttgcttgcttaggaaaatgtaggttttttcctggagcaaggaacaagtagactatgtgctttgcttaaagctaaagttatgcggttaacatctctagatttttcttcatagttttcttgtttatgcatgctaaattatgcactgatgtattttcaataagtattgacaattatggggcatttaggttcatcagaagaaatggtcagaggctatacagagccttcagtatgcaatacgaggttacccaacatgtgcagatttatgggaagtgggtattttttccccttgtttcctttattttgttaatgctggtgaaatctaagtcaggcatgctatttgtatgtaattaatattccatattatggtattaggcactcggtctggcataccaccgtttgggcatgtttactgcagcagtaaaggtgtgttacttttttttagcatcattagtgaatgctgcagtatactatattgaggcttctgaatatgcttaattcagtttatgctggcagtcgtatgggcgagctgttgaactggatggttccaaggtctttgcgttgatagaaagtggaaacatccagctaatgcttggttattttagaaaggtaggaatttttttcacttaatggaactattatattactagatatacacaattttatcagcactatgtataatttaccattgcaaattctatgccagccctttactgctgctaccgctaataatttccatgatcttatacgtgttgggaaatacgcaatgccagggtgttgaacagttccgctctgccttggagatggctcctcaaaatcattccgcgtactttggtcttgcttctgcattgcttgcttgggcaaggcagtgtgtaatgactggggcctttggctgggcagctagtctgttgaaggtatttggacactagtcttggtttcaattgaaacatatcctgctatattgtctcagtgtagtttgttctaggaagcatgcaaagctgccaaagtttgtacttctttgactggaaacctttcctgtgtttggaaactgcatggagatgctcaggtattctctattttactgttaattaatcatttaaatttcagtatcctataattttaagctttcttgctttatgtcagctcgcacttgcaagatgctttccatggggtgatggtaatatcaaggggggtatggatgatggtactttcaggactactgtacttgagtggagaaatacatgtttgttggctgcaaatggtgcaaaattctcataccaacgagctttgcatctcactccctgggaagctaatattcacaatgacactgctatatgtcttgatctcatttataccattgaggagaataatagtctagatcccataacttggtaagtcttttattccacattaatagcttagtagcatgtggcatctgttcttaacaagcgtacatgataaaattttatttctgtgtacaacagggaactgccagagaaaatgtcgttgggtgggttgatactggaaccagtcaataaggatttttgggttacattgggctcggtgtcaagtaatcaagctttaaaacagcattcttttatcagagcactgcatcttgatatgtctctctctgaagcttgggcataccttggaaaggtagtactccccccggacacaaaaacatgtcgttttagtcattgacatgaatacatctttggctgctaattttggttgcgaaacatttgacaaaccccccaaaatatataatattgtgaaattacttttcgaggtaaatctacacacatgattttcacacatggaatacaaatattaaaaataatgtttaaagtttttttaagtttaacttaaaaaaaaatccaaaatgacatgtttccataaccggtgttagtactatttatgcggcagctgactgttcttctattaattgagaggtaagtgatagttcgaccttcagatttacaggcattcaggtgataagcagttggcaagacaagcatttgatcgagctcgaagcattgatccttcactggccttgccatgggcaggaatgtcagctgaaaattaccaccagcctgggtatttctcccatagaatttcatagaagatttcatatattgttacagataatttcttattaagctgattatacgctttggcatgatcttcaagggatgggccagtaaatgaatgttttgaaagctgcttgcgggctgtgcagatacttcctgtaagatagttcatttgtatcatacttgttgtcagtataacattaatgatttggttagtttttctccttcaagtttgttttgatttcattatagcgatgtttttgtattagcttccagagttccagattggtcttggaacaattgctgctcgttctggtgaacttctatcacctcaggtatgctttcaaactcccccctcccctgcaaaaaagaacaaaaacattttaaaaaaagaaggtacttcatggttgaaataagtcctttctttcccgcagcggtgtgctttagtggcaattatcacatgctctattatcattaatgttctaattgctgatgctaaatgctactgttatggtcccagaccacaatagctacatattgcttcattatggtgtcatgtatgcgaagtgttactagctgtccgtgcattgtctgctactttagattgctcagtttttttggatattttagagtaccagactacatggttgacacttgtttcctgttcttttccctgtaacacataatccccttatacttagtcctattatttaggtattgatggctgtaaggcaagctgttcaacgggcacctcattaccctgagtcgcacaacataaatggcttggtttctgaagtgcgatcagacttccaatctgcaattgcatcgtaccgacaagcaaaatttgctttagatatgatgcgcaactccaaaacagactgcagatgtcatattgctgatatttccgtgaatcttgcccggtcactatgtaaggtaagagtattatcatccgctttgatgacaacaaaaaaaaatccatatcaggcagctgaaagatcatgttacttcaaatgttttatgcgcaataagtttgcattttctgtcacattatttacaaatgtttatggaacagttatcctttaaccgttgctttgactgtagactggtcttgcaactgaggcagtgcgggagtgcgaagaattgaaaagacaaggttttttttttatttcatgtagcaatggaaggatctttttttcctattttctcctgaattgccatgcatggcaaataaattcctttaagttattttcttatgctatccaacacacaggctaacaagttatctcaaatttctaggatttctgaatgatgacggattgcagatatatgctctttcattatggaaacttggtcggcatgatgaagctctttcagtatcaagaaacttggctgaaaacttatcgagtatgaagcaggagagtgcaactgcagctttaggattcatatgcacgttgacatacaacatctctgggaaggactctgcagctgcggtcattcataaactgcctggtcaactcaattacagcacacagctgaaatttattatctctgcattagatgctttacagccaaacaagcgttttcagttaccccagctgagtatgcctcctaggcttacatcgtatgaagtcatgagtgaagtccactcaaatattgctcttggaaatgctgtaagtatggttttctaaaattcttggcattctatgtgaaaaaatgcttcttttgggaatgtgctagagcataaatgtgctgatatagattaaaaataatccttgtagattggtggggaatcagacaagtttttaagggttgatggtggcctgtcttacctgaaaaaggttctacacatgtatcccgactgcagtttagtaaggtaatgatcttgcatgcactggtaatatctaggttctagacttgtggcttcaatcgaaatgttgtgcactatatttccttcgttgcatgctgtagaaaccaacttggatctctgctactgtcaagtgaagattggatggcttctcataaagcagtaagggttacttcattgtcccggggatatacatccaataggggcttaagatctccacaccaaattcaagcatgtgcagcagtttcttgctatgctacctgcacttcttacccaaagttctcttttccaacatgtgaagatcaatacctaagcggatacaatgcaatatgccgcctgcaaaggtacatcttctcttactatatttaccatgtatctaatattcttgtgtgtgacttgaccttaagcttgcggtttgactgtaacaatcttgcacatattttccaaagaacaatctatccaactaaacaagctcttatgcttattcccacaggagatgtaacaaccattcatgctttgtatttctaaaccttccattaataaataaaatggcatgagtcttaaaaaagaactaagtgtgtgactttctttgcaggtgggttcatctagaaccgtggaaccaagatgcacgtcgcctccttgtacttacccttttccaaaaagcacgtgaagaaaagtatccgaaacatatctgcaccattttgaagaggctgattttgcaagttctctccagtggtagcaattcacaagacaataaggtggttcagtatgggaactacttgttacttcttgtggcttcagaggttagtttgcaatctggtgaccatggcaactgtattgctcaagctactgaagctcttggagtaacttcttcgagcgtggattctttctttgcacacttgcaactgtgtcgggcctatgtgatgcaaggcaatcttttgaactctaggagtgagtacatgaaatgcctgcaaaaccgtacagatactgaaattggctgggtaatacttaagcaacttgcatctatatgttcactggagggtacccctgatgaaatagagatacatctcggaggatgcgttgaaaggaaaggtagcaatgcatccaaatggatgtctcttttttatctagcatgcgctcagtgttcagtatggaatgaggactttgcaagtgctgaaaaagctattgctcaggcatgtgctgaaggggatcctgacagctgtgtcttatttctcaacggtaattggcatgctacttatttactataatgactaactaaattgggatgttttattgttatttttcttagtagtttactctacactagcccggaataaattctaactaacaatcttgatgtttatttttgacaatgtgctgactgaaacattacccttgtaggcgcaatttgtatggacattgcttggaggttcgcggcccctcaatttatagcccgtgcagcttccagcctcagaaaggcacagcagaaatcacttgcttctttacctattgtgtccctcttactggcccaagcagaaggcagccttggctccaaagccaagtgggagaaaaaccttcgtctagagtggttctcatggcccccaggtctgagcatggcttcatacaaagcacactgttcttgaaatttcaccatttaatttacctttttccgattcgtcgtgcagaattgaggcctgctgagctctatttccagatgcatcttctggcaacgcagtcaagtgcagcaacttcccagcagaaccagctagtggaaaccatgcaaaccccagagaagtggcttctcagggcgatacacctgaacccgtcgtgctctaggtactggacggctctgatgcaactcgtgtacgtgtaacccttcgaaattggaagcactgatctttggtgaaaccaaccacaatgtagcgcatttcttgactcagctgtaagcatatggattggctggatgaactgccgacctgtctgtgataagtgaaaaacctgcatatgcttgcttaccgtgttgagggctgagacgtgagatgtttccgg</dnaseqindica> 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| External Link(s) |
