Difference between revisions of "Os10g0569200"

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(Created page with "{{JaponicaGene| GeneName = Os10g0569200| Description = Translation initiation factor eIF-3b family protein| Version = NM_001071978.1 GI:115483551 GeneID:4349446| Length = ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os10g0569200|
 
GeneName = Os10g0569200|

Revision as of 21:13, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0569200

Description

Translation initiation factor eIF-3b family protein

Version

NM_001071978.1 GI:115483551 GeneID:4349446

Length

4385 bp

Definition

Oryza sativa Japonica Group Os10g0569200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:23018643..23023027

Sequence Coding Region

23018865..23019206,23019303..23019411,23019681..23020213,23020301..23020499,23020596..23020720
,23020792..23020875,23020948..23021076,23021192..23021320,23021448..23021594
,23021961..23022201,23022714..23022835

Expression

GEO Profiles:Os10g0569200

Genome Context

<gbrowseImage1> name=NC_008403:23018643..23023027 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:23018643..23023027 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgctagaaatctccatggaaggcatcgaagcgcgggcgcgggagcttggggtcgacctctccaccgtcgatctcgactccgtcaccctccccgccggcgaggacttcggcatcctcagtgacgatgaggatttacttcggattgatgaccctatggagcttgaaatggggtttgctaacgttgttgtcgtggacaacctgcccgttgttccaccagagaagtttgagaagttggagaacgtcatacgcaagatctacagtcaaattggtgcgatcaaagaaggtggtctttggatgcctgtaaacccagagacaaagaagacatacggttactgcttcatcgagtataataccccacaggaagctgagcttgctagggaaaagacaaatgggtacaagctcgacaagtctcacatctttgcagttaacatgtttgatgactttgacaagtacatgaaagttccagacgaatggatgcctgctgaaattaagccatacactcctggagagaacttgcaaaaatggctggctgatgagaaggcccgggaccaatttgttatccgtgctggtactttcactgaagtttactggaatgatgcaaggcagaagatgcctgaacttgtgttccaaaagcagtactggacagacagttttattcagtggtcccctcttggaacatacttggcaacagtgcataggcagggctcccaggtgtggggtggcgacgataagtttgagcgtctaatgcgatttgctcatgcacaggtgaaactgattgacttctcccctggtgagaaatatttggtcacatatagtagccacgagcccagcaaccctagagacactcatagggttgttcttaatatctttgatgtgaggactggcaaagtgatgcgcgactttaaaggaagtgctgatgaattcagtgccagtggaaatatcagtgtttctggtgtttcatggcctattttcagatggggtggtggaaaagacgataaatattttgcaaggcttgggaagaatgttatatctgtctatgagactgaaacattctcccttcttgataagaaatctctgaaggttgagaatgttgtcgacttctgctggtctccaactgatccaatcatagccctttttgtccctgagttgggtggaggaaaccagcctgcaagggtgagccttgtgcaaattcctggcaaagaggagctgcggcagaaaaaccttttcagtgtcagtgattgcaagatgtactggcagaacagtggagaatatcttgctgtccaggttgatagatacacaaaaaccaagaagagtacttacactggatttgagctttttagaattaaggaaagggacatacccattgaggttcttgaattggacaacaagaacgataagatcattgcctttgcatgggagcccaaaggtcaccgctttgctgttattcatggtgatggccctaagcctgatataagcttctactccatgaaaacatccaacaacatcagtcgtgtgtccaagctcaccactctcaagggcaagcaggctaatgcattgttctggtctcctggtggaagattcattgttttcgctggtctgaagggctttaatgggcagctggagttttacaatgttgatgagcttgagacgatggcaacgggtgaacatttcatggctactgacattatgtgggatcctactggaagatatcttgcatctgcagttacctcagtccatgaaatggagaatggtttccaaatatggtctttcagtggcaagcaactttacaaggtgtcaaaggaccacttctttcagttcctgtggcgtccgagaccaccgtcgctgctgacccctgaaaaggaagacgagattgcgaagaacctgaggaagtacagcaagaagtacgagcaagaggatcaggatgccttcaaccagctgagcgagcaggaacgcaagaggcggaagcagcttcaggaggaatgggaaggatgggttgccaagtggaagcagctgcacgaggaagagagaccatacaggatggagctcagagacggggaggccagtgacgatgaggaagagtacgacaccaaggaagttgagattgaagaggaggtagacgtccaagaagaagttccattcgagctggatcaggagtga</cdnaseq>

Protein Sequence

<aaseq>MALEISMEGIEARARELGVDLSTVDLDSVTLPAGEDFGILSDDE DLLRIDDPMELEMGFANVVVVDNLPVVPPEKFEKLENVIRKIYSQIGAIKEGGLWMPV NPETKKTYGYCFIEYNTPQEAELAREKTNGYKLDKSHIFAVNMFDDFDKYMKVPDEWM PAEIKPYTPGENLQKWLADEKARDQFVIRAGTFTEVYWNDARQKMPELVFQKQYWTDS FIQWSPLGTYLATVHRQGSQVWGGDDKFERLMRFAHAQVKLIDFSPGEKYLVTYSSHE PSNPRDTHRVVLNIFDVRTGKVMRDFKGSADEFSASGNISVSGVSWPIFRWGGGKDDK YFARLGKNVISVYETETFSLLDKKSLKVENVVDFCWSPTDPIIALFVPELGGGNQPAR VSLVQIPGKEELRQKNLFSVSDCKMYWQNSGEYLAVQVDRYTKTKKSTYTGFELFRIK ERDIPIEVLELDNKNDKIIAFAWEPKGHRFAVIHGDGPKPDISFYSMKTSNNISRVSK LTTLKGKQANALFWSPGGRFIVFAGLKGFNGQLEFYNVDELETMATGEHFMATDIMWD PTGRYLASAVTSVHEMENGFQIWSFSGKQLYKVSKDHFFQFLWRPRPPSLLTPEKEDE IAKNLRKYSKKYEQEDQDAFNQLSEQERKRRKQLQEEWEGWVAKWKQLHEEERPYRME LRDGEASDDEEEYDTKEVEIEEEVDVQEEVPFELDQE</aaseq>

Gene Sequence

<dnaseqindica>3822..4163#3617..3725#2815..3347#2529..2727#2308..2432#2153..2236#1952..2080#1708..1836#1434..1580#827..1067#193..314#gcttcaaaaccctagccgactcaatcccggccacactcccacccccacgcctccctcgccgccgccgccgccgccgccgccgccgcctctctccccgcaatctcctcgccgccgccaccgcagtcaacgacgccggccgtcgctgtctttctcgcgcgcgcgtggaggattcgaggttttatgtaggcgaagatggcgctagaaatctccatggaaggcatcgaagcgcgggcgcgggagcttggggtcgacctctccaccgtcgatctcgactccgtcaccctccccgccggcgaggacttcggcatcctcaggtagccaccgcctctcgatccggccccaacaaaactacctcacgccgtcgtgcgctttcgctggataccctagtcacccccttccgtttcattcagatccgattatagcatcgcgtgactgttcgatctgccttaatcaacgcggcagctagtatctgatgcttttagctcccactggtagagattttgatacggttttttagatgtgccatgatgttaatctgcatgagaactcgtaatgtgtcggtatgctaactatgtataacattataagtgacatagcaggcactgattgcatatatttgtatataccaaggttaaacatgcaactggtgtgaatgactgtatttcttatctgactaaaattgttccatctggtagcttatggcggctgatgcttaagctgactcacaattacatggccagtattgtttgcatttaacgatttttgtttgtccagaaaattttcttgagttttccttttatgtcgctgactgatttgtaatgttcagtgacgatgaggatttacttcggattgatgaccctatggagcttgaaatggggtttgctaacgttgttgtcgtggacaacctgcccgttgttccaccagagaagtttgagaagttggagaacgtcatacgcaagatctacagtcaaattggtgcgatcaaagaaggtggtctttggatgcctgtaaacccagagacaaagaagacatacggttactgcttcatcgagtataataccccacaggtactttgccacatgtcagatgcatttttccccttagagcatgacacatggcttgattcttgtctttgcaagtcatccctcagatctgtaccatttgaacatggatcacacatgagtacatgccttgagaacgccatgggcccaatcatttaaatattgttttgaaccatcattatttgcttcatccatgttcatttagcttttaatcgtttaatatgatgtaagatagaaatattgtgatctttacttatagtcaggtgaggaaaaataggaaattgaacgactctgtcggatgtttcgtttttatgttcatttttaagtctagtagggtttaagtttgtattactttgtttgacattatgtcaggaagctgagcttgctagggaaaagacaaatgggtacaagctcgacaagtctcacatctttgcagttaacatgtttgatgactttgacaagtacatgaaagttccagacgaatggatgcctgctgaaattaagccatacactcctggagtaagcattttcaactttacaccacccaaaagcgtgtttattttttaatgagcattttaattttgaaaattattaagatcctttttgtgacattgcctaatacctagattttgcacatgttttgcaggagaacttgcaaaaatggctggctgatgagaaggcccgggaccaatttgttatccgtgctggtactttcactgaagtttactggaatgatgcaaggcagaagatgcctgaacttgtgttccaaaagcaggtaccttgggtttcttgaattgaaattgaaaaatttaaggtcatgaactgtgctctgcactcccaatgcataactgaatatactcatcactttacctttttttttactcgtctagtactggacagacagttttattcagtggtcccctcttggaacatacttggcaacagtgcataggcagggctcccaggtgtggggtggcgacgataagtttgagcgtctaatgcgatttgctcatgcacaggtacgtgatttacgctgcactgagttatgtcagatatgtaatattttatctacctaacactgcttgtaacaggtgaaactgattgacttctcccctggtgagaaatatttggtcacatatagtagccacgagcccagcaaccctagagacactcatgtaagggaccgtcttacattcatttatctgctcatagctttcccttctgacttttgtgctggatgttgtagagggttgttcttaatatctttgatgtgaggactggcaaagtgatgcgcgactttaaaggaagtgctgatgaattcagtgccagtggaaatatcagtgtttctggtgtttcatggcctattttcaggtgaacacactggtttttgtatttgttattgaatgcattacctctttgttaagttgttgtacctgggggtgcttactatattttttgtgtctgaagatggggtggtggaaaagacgataaatattttgcaaggcttgggaagaatgttatatctgtctatgagactgaaacattctcccttcttgataagaaatctctgaaggttgagaatgttgtcgacttctgctggtctccaactgatccaatcatagccctttttgtccctgagttgggtggaggaaaccagcctgcaagggtaagtgcaattttctgtgcttcatcccttttgaggaagttccgtcaactaatggtgaagactaaaatctataatttttattgaaaggtgagccttgtgcaaattcctggcaaagaggagctgcggcagaaaaaccttttcagtgtcagtgattgcaagatgtactggcagaacagtggagaatatcttgctgtccaggttgatagatacacaaaaaccaagaagagtacttacactggatttgagctttttagaattaaggaaagggacatacccattgaggttcttgaattggacaacaagaacgataagatcattgcctttgcatgggagcccaaaggtcaccgctttgctgttattcatggtgatggccctaagcctgatataagcttctactccatgaaaacatccaacaacatcagtcgtgtgtccaagctcaccactctcaagggcaagcaggctaatgcattgttctggtctcctggtggaagattcattgttttcgctggtctgaagggctttaatgggcagctggagttttacaatgttgatgagcttgagacgatggcaacgggtgaacatttcatggctactgacattatgtgggatcctactggaaggtaagcctatacttggtcaggaaatttgtagtcctcaccatgacactggcactttattatgtcaaattttcaaaaaccaagtatcatatgccctacgaaaaatgttcactctaaatgaaaatttcaaaaccaactcttagaatttaaaatatttgagttttggttgcaatttttttataatacttctcactggtgtgactaaacaagttaagatggatttccttgtatgttagtggaactaaaatgatgttgggatttttttttgttagatatcttgcatctgcagttacctcagtccatgaaatggagaatggtttccaaatatggtctttcagtggcaagcaactttacaaggtgtcaaaggaccacttctttcaggtatggaggttccatcctacccttttctggactctcatgtctcattgctttacaccattgtaatcctttgtcatttactttaatttactggtacagttcctgtggcgtccgagaccaccgtcgctgctgacccctgaaaaggaagacgagattgcgaagaacctgaggaagtacagcaagaagtacgagcaagaggatcaggatgccttcaaccagctgagcgagcaggaacgcaagaggcggaagcagcttcaggaggaatgggaaggatgggttgccaagtggaagcagctgcacgaggaagagagaccatacaggatggagctcagagacggggaggccagtgacgatgaggaagagtacgacaccaaggaagttgagattgaagaggaggtagacgtccaagaagaagttccattcgagctggatcaggagtgaaaagcttatgctagcatctgctgagatctttttctgttgttgcctgtcttaagttaatttctgccccctttgcataataggctttagagatcaagaacacaatttcttgatctttctggtttctactggttgattgtacactttgtccttggattttacggaccaatgtattcgaagatgaaaatttgcggttggcatactaattttaatgtgtcgttctcc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0569200, RefSeq:Os10g0569200