Difference between revisions of "Os10g0579100"

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(Created page with "{{JaponicaGene| GeneName = Os10g0579100| Description = Protein of unknown function DUF221 domain containing protein| Version = NM_001072036.1 GI:115483667 GeneID:4349511| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os10g0579100|
 
GeneName = Os10g0579100|

Revision as of 21:13, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0579100

Description

Protein of unknown function DUF221 domain containing protein

Version

NM_001072036.1 GI:115483667 GeneID:4349511

Length

5248 bp

Definition

Oryza sativa Japonica Group Os10g0579100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:23543443..23548690

Sequence Coding Region

23543592..23543984,23544091..23544324,23544442..23544766,23544894..23545139,23545231..23545571
,23545725..23545805,23545930..23546049,23546204..23546305,23546555..23546690
,23546865..23547017,23548260..23548561

Expression

GEO Profiles:Os10g0579100

Genome Context

<gbrowseImage1> name=NC_008403:23543443..23548690 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:23543443..23548690 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacgctgccggacctgggtgtgtccgccttcatcaacatcttgggcgccttcgtcttcctcctcatcttcgccgccctccgcctccagcccatcaacgaccgcgtctacttccccaagctctacctcactggccagcgacgccaccaccctcaccctcatggcttcgtcaacctcgacctctgctcctacctccgcttcctcgcctgggtccccggcgccctccgcatgtcccagcccgacctcatccaccacgccggcctcgactccgccgtctacctccgaatctacacgctcggcctcaagatatttttgcccatcatgactgtcgccttgctggttcttattccagttaatgtctctggtggcacgttacttaatttacgaaaagaaattgtctttagtgatattgataagctttccatatcaaatgtcaaccctggatccaacaggttctttatccatctattaatggcatatgtgttcactttttggacttgctttatgctatacaaagagtatagcaatgtggcatttatgagattgcacttcctggcttctcagaagcgttgtgctgatcagttcactgtgattgttagaaacatacctcatgtttcaagccattcaacatctgaaacagtggatgaattcttccgtaggaatcatccagaccactatcttggtcagcaggctgtttataacgcaaacaggtatgctaaacttgtgaagaaaaaagagaggcttcaaaactggttggattactaccagctgaagtttgaaaggcatcctggaaaaagaccaattggaaggacagggtgccttggtttctgcggtagagaagtggatcaaatcgactattaccgtgctagaatcagcgagcttgataagaagcttgcatctgagcgtcaaagagttctcaatgacccaaaagctgttatgccagttgcttttgtgacatttgactcgagatggggagctgctgtatgtgcacagacacaacagtcaaagaatcctacccaatggctaactgattgggctcctgaaccgcgggatgtatattggcagaatcttgccattccatttttctctctcagtatccgcaagttcctgatatccattgcagtttttgctctggtgttcttctacatgatacctatagcttttgtgcaatcacttgccaatcttgagggtattgaaaaagttgcacctttcctaaggcctgtgatagacacaccagtggtgaaatccttcctgcagggtttccttccgggtttggctttgaagatttttctgtatatcctcccaacggttttgatgattatgtcaaaggttgaaggttatgtgtctttatcatctctggaaaggagggctgcttcaaaatattactacttcatgctggtgaatgtatttcttggaagcataatcgctggcacagcttttgaacagctaaatgcatttttccatcagccaccttcacaaataccaaggaccattggagtagctataccaatgaaagctacattttttatgacatacataatggttgacgggtgggctggcatcgcgaacgagattcttcgagtgaagccgctggtgatataccacctgaagaacatgtttattgtgaagacggagcgggacagggagagggcaatggatccgggcagcattgggcttgcagagaacctcccatcactgcagctgtattttcttcttgggcttgtgtatgctgtggtcacccccattctcctccctttcattatcatcttctttgccttcgctttcctcgtgtacagacaccagatcatcaacgtgtacaaccaagaatacgagagtgctgctgcgttttggcctcaggtgcactctcgcataatagcgagcttgctgatctcgcatgtaactctgtttgggctgatgagcaccatgaaggctgcctactccaccccgctgcttatctttctgccactcctcaccatatggttccacaagtactgcaagagccgtttcgagcctgctttccgcaagtaccctctagaggaagcgatggagaaggacaatctggagcgcacgtcggagccaaacctgaacctcaaatcgtacctgcagaacgcttacctgcaccccattttccacatgtttgagcagcagcagcagcaggagcaggagcagcaacgggaggagaaggtagaggtgcgaatcgacaaggcgcagcaacatcatcatcggcaggtagaggaggaagaggaggagagcaagagcagccaggctacaacacactactaccaccatcaccatgagcagaccacaacgacgacacaccaccattaccatcagcatgagcatatgagccactaccacatgggcccctccgacacagctgactcaccctcgccgccgcactttgtctaccattatggcgtcgacccttga</cdnaseq>

Protein Sequence

<aaseq>MATLPDLGVSAFINILGAFVFLLIFAALRLQPINDRVYFPKLYL TGQRRHHPHPHGFVNLDLCSYLRFLAWVPGALRMSQPDLIHHAGLDSAVYLRIYTLGL KIFLPIMTVALLVLIPVNVSGGTLLNLRKEIVFSDIDKLSISNVNPGSNRFFIHLLMA YVFTFWTCFMLYKEYSNVAFMRLHFLASQKRCADQFTVIVRNIPHVSSHSTSETVDEF FRRNHPDHYLGQQAVYNANRYAKLVKKKERLQNWLDYYQLKFERHPGKRPIGRTGCLG FCGREVDQIDYYRARISELDKKLASERQRVLNDPKAVMPVAFVTFDSRWGAAVCAQTQ QSKNPTQWLTDWAPEPRDVYWQNLAIPFFSLSIRKFLISIAVFALVFFYMIPIAFVQS LANLEGIEKVAPFLRPVIDTPVVKSFLQGFLPGLALKIFLYILPTVLMIMSKVEGYVS LSSLERRAASKYYYFMLVNVFLGSIIAGTAFEQLNAFFHQPPSQIPRTIGVAIPMKAT FFMTYIMVDGWAGIANEILRVKPLVIYHLKNMFIVKTERDRERAMDPGSIGLAENLPS LQLYFLLGLVYAVVTPILLPFIIIFFAFAFLVYRHQIINVYNQEYESAAAFWPQVHSR IIASLLISHVTLFGLMSTMKAAYSTPLLIFLPLLTIWFHKYCKSRFEPAFRKYPLEEA MEKDNLERTSEPNLNLKSYLQNAYLHPIFHMFEQQQQQEQEQQREEKVEVRIDKAQQH HHRQVEEEEEESKSSQATTHYYHHHHEQTTTTTHHHYHQHEHMSHYHMGPSDTADSPS PPHFVYHYGVDP</aaseq>

Gene Sequence

<dnaseqindica>4707..5099#4367..4600#3925..4249#3552..3797#3120..3460#2886..2966#2642..2761#2386..2487#2001..2136#1674..1826#130..431#tagtaggctgtagctggcctgcactgcacgcctggagtcgtgcagccagaaaggcaaggctgcacacttgctgccgctctcgcctccccatactcagtacagtagctaggaagaaggcaagggaagggcatggcgacgctgccggacctgggtgtgtccgccttcatcaacatcttgggcgccttcgtcttcctcctcatcttcgccgccctccgcctccagcccatcaacgaccgcgtctacttccccaagctctacctcactggccagcgacgccaccaccctcaccctcatggcttcgtcaacctcgacctctgctcctacctccgcttcctcgcctgggtccccggcgccctccgcatgtcccagcccgacctcatccaccacgccggcctcgactccgccgtctacctccgaatctacacgctcgggttggttcgctccctcctacacctcccttccttttcttttttactacactacttctactggtattccagattaattaagcaccaccgtatacgtagttgcatttgctttccctgcactgcacattattatgggcatccctcccttcctagtgcaactcttgttgatttgtgtctagtatgtgctcttgcttgcctgtgtctcctaccaaagtcgtcctgctcatacagtactactatggacttcaattatggttgtttccagctgcatggagtatgcgataggaattactcttcttgcttcttttttttgtgtaaagaaaatccttgcttgctacactactgtagtcctttttattttctctgccgctaattaaggagctctttcctgaatactttcgctcatttccgattccatccacaattgattgattggacctcacaaattgaggaggagtgctgcttgccaagaatattactatattgcttgtatgtgtttggtgatgacgacattgtggccgtgatggatcccgcggtaattagttactggactagttaatactccttcgttgaaaacggtgtcggcggataggataatcttaacttgatgtgcaccgcaattcctggccttgtttcatggaggaagagccatagcctgtatattttgtttggggcctagcctacacgactggtactcctatgaattcataatgcagttctaaattaaaatatacacatatatttctaatgtttggcgtgttgctcatgttcttgaatcatgctcgcccactacctttggaaaattgccgtccaacttttgtttgtctccaacgattcctcaatccgtgtgatggtggggactgctcttttacaactggagatgcttttcttgccactttggaacttgcatgaaatttactcaaaaagttttacctatacaggatgtactagtcatattttgatacttgtactcttgtcattctcttatttatagtactgtacagaacaaagtatatataactccaccatcacgtggggggaaactaactaactaacttgtgctagaagtttgaggatttttcagccatagttcctcaggcagcgccttggaccttttctttttccctttccccactttcctgtgagcaaaagttttgagtttgtgccatgagacaaatgatcaaattttatttaaccagtttctatgttttgcacactaacccttttgttttgtttctttggcagcctcaagatatttttgcccatcatgactgtcgccttgctggttcttattccagttaatgtctctggtggcacgttacttaatttacgaaaagaaattgtctttagtgatattgataagctttccatatcaaatgtcaaccctggatccaacaggtttgtccacaagtatcttaatcatgaactcttagcagtgttaattattctttggcagagctcgtataattgttgatgactgctgtacttgaactctacattgctctggctttatgctttcatttgtagcattgcttgaaattgtctgaccatgtcctctgcatttcacttcaggttctttatccatctattaatggcatatgtgttcactttttggacttgctttatgctatacaaagagtatagcaatgtggcatttatgagattgcacttcctggcttctcagaagcgttgtgctgatcagttcactgtaagtgcaaataactaggcaatgctatatttagttctactacaatttatgtatcacaaccaagctccactaaattttttgtaaaggaatagaagagcagttgaacaaatatttggatttaatgtctatagtgttgtcttgctgactggggcatactccttttattgtgatataactcaatgggataccatttaatattgagatccatagttatactatatcacttactaatatattttggcatggcaggtgattgttagaaacatacctcatgtttcaagccattcaacatctgaaacagtggatgaattcttccgtaggaatcatccagaccactatcttggtcagcaggtacctaatcctcaccattgcttatgcctcatcatggatttaaactggaatgatgtttaaagctctacttgatttctgaccgatattcaatttacaaaccatggttattgatgaatatactgaccgcaaaactaacctcaatctggatgttcaggctgtttataacgcaaacaggtatgctaaacttgtgaagaaaaaagagaggcttcaaaactggttggattactaccagctgaagtttgaaaggcatcctggaaaaagaccaattggaagggtattttataaacgttgatcctgtcctttcgtttgcatcaataccaagttcttggacaactcgttctgaattcatgttccccccaagaaatgtttcaagcttgtgaatatttttggttctgcagacagggtgccttggtttctgcggtagagaagtggatcaaatcgactattaccgtgctagaatcagcgagcttgataagaaggtagagctagaacccacagtgtcgtgtttcttaccattcacaggcactcagcataactttgcaggctgttgcatgtatgtttgtatgcatgagtgaggctcttgttcagttttaacttttaacacaagctgtttgttattgtgatctttttagcttgcatctgagcgtcaaagagttctcaatgacccaaaagctgttatgccagttgcttttgtgacatttgactcgagatggggagctgctgtatgtgcacagacacaacagtcaaagaatcctacccaatggctaactgattgggctcctgaaccgcgggatgtatattggcagaatcttgccattccatttttctctctcagtatccgcaagttcctgatatccattgcagtttttgctctggtgttcttctacatgatacctatagcttttgtgcaatcacttgccaatcttgagggtattgaaaaagttgcacctttcctaaggcctgtgatagacacgtaagttagctcccattatatctgtcgaggttctgtaaattgcgccccttttgctattcactcatcatatggcttgctgtataacttgcagaccagtggtgaaatccttcctgcagggtttccttccgggtttggctttgaagatttttctgtatatcctcccaacggttttgatgattatgtcaaaggttgaaggttatgtgtctttatcatctctggaaaggagggctgcttcaaaatattactacttcatgctggtgaatgtatttcttggaagcataatcgctggcacagcttttgaacagctaaatgcatttttccatcagccaccttcacagtaaatttcttcgagcaacctctcttttgtcacatatgctactgtttccttgtcctcaattaactaatgcgatcatggcatatacgagtaaatatactgatatgatccttccttccaatttctgcagaataccaaggaccattggagtagctataccaatgaaagctacattttttatgacatacataatggttgacgggtgggctggcatcgcgaacgagattcttcgagtgaagccgctggtgatataccacctgaagaacatgtttattgtgaagacggagcgggacagggagagggcaatggatccgggcagcattgggcttgcagagaacctcccatcactgcagctgtattttcttcttgggcttgtgtatgctgtggtcacccccattctcctccctttcattatcatcttctttgccttcgctttcctcgtgtacagacaccaggtgagtctgtctgtcggtcatgcctgctgctttggctttggctttggctttgaaagtgatggttgttttggtttggctattcagttaggcgctaaaatgtgttttttttttgtttagatcatcaacgtgtacaaccaagaatacgagagtgctgctgcgttttggcctcaggtgcactctcgcataatagcgagcttgctgatctcgcatgtaactctgtttgggctgatgagcaccatgaaggctgcctactccaccccgctgcttatctttctgccactcctcaccatatggttccacaagtactgcaagagccgtttcgagcctgctttccgcaagtaccctctagaggtgcgtgcatctctcattactctctttgtgaaatcaagaataatttgttcaagtatatgcaacaatgacatctaattaacgagggaataacctgtggtgttggcaggaagcgatggagaaggacaatctggagcgcacgtcggagccaaacctgaacctcaaatcgtacctgcagaacgcttacctgcaccccattttccacatgtttgagcagcagcagcagcaggagcaggagcagcaacgggaggagaaggtagaggtgcgaatcgacaaggcgcagcaacatcatcatcggcaggtagaggaggaagaggaggagagcaagagcagccaggctacaacacactactaccaccatcaccatgagcagaccacaacgacgacacaccaccattaccatcagcatgagcatatgagccactaccacatgggcccctccgacacagctgactcaccctcgccgccgcactttgtctaccattatggcgtcgacccttgataatcgcccagatagtctcttagcttctgaatcactagattgtttgttcttttgttttttccttttgtcaattgggggtgatatttttattcctctaattaacgaccgactggctgctgataattatttaatgatctgttgtaaatgcg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0579100, RefSeq:Os10g0579100