Difference between revisions of "Os11g0100100"

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(Created page with "{{JaponicaGene| GeneName = Os11g0100100| Description = Similar to Gamma-aminobutyric acid receptor-associated protein-like 2 (GABA(A) receptor-associated protein-like 2) (Ga...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os11g0100100|
 
GeneName = Os11g0100100|

Revision as of 21:13, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os11g0100100

Description

Similar to Gamma-aminobutyric acid receptor-associated protein-like 2 (GABA(A) receptor-associated protein-like 2) (Ganglioside expression factor 2) (GEF-2) (General protein transport factor p16) (MAP1 light chain 3 related protein)

Version

NM_001071754.2 GI:297611006 GeneID:4349525

Length

2978 bp

Definition

Oryza sativa Japonica Group Os11g0100100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:188..3165

Sequence Coding Region

336..427,515..633,704..756,2890..2945,3041..3077

Expression

GEO Profiles:Os11g0100100

Genome Context

<gbrowseImage1> name=NC_008404:188..3165 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:188..3165 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagcccaggcccttcaaggaggagttcaccttggaggagagggccaaggagtcggccgccatgatcgcctcctaccccgacaggatccctgtcattgttgagaaattttcgaggagtaatcttccagaaatggagaagcgcaagtacctggttccatgtaacatgccagttgggcagtttattttcatacttcgttccaggctacatttgtctccagggacagcgttgtttgtgtttgtcaacaacactttgccccagactgctcagctgatgggcagtgtgtatgagtcatacaaagatgagggcgatggcttcctctacttgtgctacagcagcgagaagacattcggttga</cdnaseq>

Protein Sequence

<aaseq>MKPRPFKEEFTLEERAKESAAMIASYPDRIPVIVEKFSRSNLPE MEKRKYLVPCNMPVGQFIFILRSRLHLSPGTALFVFVNNTLPQTAQLMGSVYESYKDE GDGFLYLCYSSEKTFG</aaseq>

Gene Sequence

<dnaseqindica>2739..2830#2533..2651#2410..2462#221..276#89..125#agcacgcaagcaaccagcgaaccctagctacagagagattcgcatcaaggaagaagacgagagaggctcatttgaattagagatagagatgaagcccaggcccttcaaggaggagttcaccttgggttagttcctagctactactcctcaattccttcctttcagatttactattcatgttcatggatagtattgactcagatcgaattcttgtttacagaggagagggccaaggagtcggccgccatgatcgcctcctaccccgacaggatccctgtactatttcttctcctatgctttgatgcttcatcactgctatcaattttcactgcaaattcctcctgcttgctgctaccccaacatacagaaaaacacacacacaacacccgattattcccttcacccgtgccagccgactgctatggcggcatgtgattcttttgttgtatgttttcttcttcacatgcacttctataaacatatcattggagtatgagactcatcattgtgtcacaatagtgcatcatataatcatgtgattgttctagatgttattcaaattcgttcaagtttctcctgagcggcacaagaaactcaggataggagctttacccgtaccgtactgatgatgattgctcaaaaatcagacattgtatatggttctcctttgtgtcagccagtagttcttgccaacacaagtgcacatttgcgtgtggcagtttcatggcagagcgtatatgcgatccatggttttgggtaatattatctagcttgtaataagaggatggaggtgctgtttcattacatattctatttttattcatctaccaacaaggctgtgatcacacactttctattttgataccattgtacaaaatgaaaaagggtaggtaggtggcttctattatttgcgagttgttgaccttggccattatatttcttagctgttttatgttacagtgaatcaggattcagggtcaaaatcatatatatggaacaccattcttgcggtattcctagatataaatagtttaagtttcactgccagccttttttttcagcaaagttagcttcagtcaactctgttgtgaattggtttgttaagtactagatggaccttatgaatcattgaattccatggaaatacactgaaactgatgagatgtgagactaaatcaccgactacttttcgttctgcccttaattgaaggccatattccttatttgggttaattacatctgtaccattaaaaatttgtcggttttaaaatataccattactatttacgtatttgtaacgatgccattgttgcttgtttgtaatctcagtgatgccactaagatacgtatttttgcatgtattagacaaaaatgccctcatcttctacttctctcttcccttgtcctctcctctttctctgctcatgctcctcttagacccaaatcccgttgttggcgatgcttccctgctgctctccgattgggtcgacccatctgcgttcgccgccggagctcgtgacgctagacaacaccgtgcaggtccaccggtgctcttcacgaaggccgtccttgctgcgtcgggcgtcgaggtggtcatcggtgatgaggtggaggaggcagttgctggactggaggaggcgatgatggcgcatcgggcagctgcgagcgtggtgagggaggtgcaggagctcgccggagaggagaagtggccactcttcgccgctctttccttggtcctttgctgctttggcattgtcgtcgccaccgcccagggctcctcgctgcgaggagaggcggacggatctaggacaccatcgtcaccatctccatcaagcgtcggcctccatcttccccatttccaccttgccagcagcagagagggactaggggagggaggagctgcattgtcggggtagttggaggaagatgccgttggcggtggggaccgtgggccccatggcaacgttgtcgtcagtgtggagctccgcgcaggaggacaccagcggtggcacgaggtggagggagacatggacatcccggctgaaggagcaccggagagggaggagatggtggctgcggtggccatgtccattgttggtcacgcttgccgctgccattgccgaactatcgcctgtctctcacgccatggaagagaggaggaaggagaaagggaaagaaggggaaaagggcaggttggttcaatttttttcataaatgaatccaaggggtaattagtggtatatctcaaatatgtgtaaaattataatggcacagttccaaatacgtgaatactagtagtatattttgaaatcaacatatttttaatggcatggatccaattaacccttatttagtttgtctatgtgttgcttgaattttatgctaacatgctagtatctatgttggcaggtcattgttgagaaattttcgaggagtaatcttccagaaatggagaagcgcaagtaagtagccagtctcctgttcttagaagctggttgaatttggaagcctaaaaagcagtggtaattgcaggtacctggttccatgtaacatgccagttgggcagtttattttcatacttcgttccaggctacatttgtctccagggacagcgttgtttgtgtttgtcaacaacactttgccccagactggtgagttttgcatatgaagtagtgttttttgggtcccgcttgatcctctgttgaagcttcagacatacaattttgttgtggctgcagctcagctgatgggcagtgtgtatgagtcatacaaagatgagggcgatggcttcctctacttgtgctacagcagcgagaagacattcggttgaccaactcctccgtggagatctgcttttacctcgggcgtcaataatatatgcatgtatatatattactatgattagaaattacaattatgtgttttatatactgtatattgattgatgtgaatgaagtgttacaaggaggagaaaagtt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0100100, RefSeq:Os11g0100100