Difference between revisions of "BGIOSGA026580"

From RiceWiki
Jump to: navigation, search
(Created page with "{{IndicaGene| GeneName = BGIOSGA026580| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026580, complete gene.| tag = OSJNBA0...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA026580|
 
GeneName = BGIOSGA026580|

Revision as of 17:03, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA026580

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026580, complete gene.

LocusTag

OSJNBA0033D24.20

Ensembl Transcript ID

BGIOSGA026580-TA

Ensembl Protein ID

BGIOSGA026580-PA

Length

2999

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:28441252..28444250

Sequence Coding Region

28444161..28444250,28443118..28443174,28442739..28442921,28442227..28442523,28441845..28442078
,28441252..28441758

Genome Context

<gbrowseImage1> name=IndicaChromosome08:28441252..28444250 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:28441252..28444250 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTACGTGCCGCAGCCATCTCGCTCCGATGCGGCCGGCCGCGACGCCGGCGACCAGCCTAGGGTTTACCAGGTTTGGCGGGGAAGCAACCATACAAACTCGGAGATAATCCAGTGGAATTTTGAAATGCCATCAGGCCCTGCTTTGGAATTCTTCTTGCGAGGGAGGTTTATATTTGGGCCTGATGTGAGATCCATATTTCTCACTATGTTCCTCATCGTTGCACCAGTGGTGGCCTTCTGCGTGTTTGTCGCCAGACACCTCATTGATGACTTTCCCGGTGATTGGGGTATCTCGGTGATGGTTGTGGTGGTTGTCTTCACCGTTTATGATTTGACGCTGCTTCTCCTTACTTCTGGTAGAGATCCTGGTATTATACCTCGTAACACTCATCCTCCTGAGCCTGAAGGCTTTGATGGGAGCAATGATTCTGGAGTTCAGACTCCACAACAGTTGCGTCTGCCTCGGACAAAGGATGTCATTGTAAACGGAATCAGTGTGAGGATTAAATACTGTGACACATGCATGCTTTACCGGCCACCTCGATGCTCACACTGTTCGATATGCAACAACTGTGTGGAACAGTTTGATCATCACTGTCCATGGGTTGGCCAATGCATAGGACTTCGTAATTATCGGTTCTTCTACATGTTTGTATTCTCGACCACGTTACTCTGCCTCTACGTATTTGCTTTCTGTTGGGTGTACATAATCAAGATTAGAAATGCTGAGAGTTTGTCAGTTTGGAAGGCAATGCTAAAGACACCAGCCTCAATCGTTTTGATCATCTACTGCTTCCTTTGTGTATGGTTTGTTGGTGGTCTTTCTGTCTTCCATTGCTATTTGATGAGCACCAACCAGACAACTTATGAGAACTTCAGGTATCGCTACGATAGACGGGCTAACCCGTATAACAGAGGCGTTCTGAACAACTTTCTAGAGATATTCTGCAGCCGTATTCCTCCTTCAAAGAACAATTTCCGGGCAAGGGTCACAGTTGAGCAAGGGCTACAGCAAACCCGTGTAGCATCAAGAGGTTTTATGAGCCCCAACATGGGCAAACCTGTTGGGGATCTTGAAATGGGCAGGAAGCCGGTGCCTTGGGATGAACCGAGGACAGCAGCTGATATCAGGGACTTGGAAGCAGGTCTCGGGGGCTTTTTGGATGAGAAAGAGGGTAGACTAACGCATGCATCCCCAGATCTGAGCAGGGACGACCTTCCAGCTGATCTCATGGAAGGACGAGCTGGCACACATTCAAGGCGGTCAAGTTGGGTTAATAGAACTGGAACTTCAGAATCAGTGGACAGTATGAATGCGCAAATAATTGCTGCTTGGGAAGCTATTCAGAGTGACCCTGTGCATTGA</cdnaseq>

Protein Sequence

<aaseq>MYVPQPSRSDAAGRDAGDQPRVYQVWRGSNHTNSEIIQWNFEMPSGPALEFFLRGRFIFGPDVRSIFLTMFLIVAPVVAFCVFVARHLIDDFPGDWGISVMVVVVVFTVYDLTLLLLTSGRDPGIIPRNTHPPEPEGFDGSNDSGVQTPQQLRLPRTKDVIVNGISVRIKYCDTCMLYRPPRCSHCSICNNCVEQFDHHCPWVGQCIGLRNYRFFYMFVFSTTLLCLYVFAFCWVYIIKIRNAESLSVWKAMLKTPASIVLIIYCFLCVWFVGGLSVFHCYLMSTNQTTYENFRYRYDRRANPYNRGVLNNFLEIFCSRIPPSKNNFRARVTVEQGLQQTRVASRGFMSPNMGKPVGDLEMGRKPVPWDEPRTAADIRDLEAGLGGFLDEKEGRLTHASPDLSRDDLPADLMEGRAGTHSRRSSWVNRTGTSESVDSMNAQIIAAWEAIQSDPVH</aaseq>

Gene Sequence

<dnaseqindica>1..90#1077..1133#1330..1512#1728..2024#2173..2406#2493..2999#ATGTACGTGCCGCAGCCATCTCGCTCCGATGCGGCCGGCCGCGACGCCGGCGACCAGCCTAGGGTTTACCAGGTTTGGCGGGGAAGCAACGTAAGCACTCTCTCTCTCTCTCTCTCTCTCCCTCTCTCTCTCGCCTTTGCCGCAGGGTGAAGCTGGAGCTGGATCTGTACTTAGCGGCGCACTATGCGCAGTGATCGGTGAGATGGGAGTGCTATCTGAGGGATCGGCTGGGGGAATTACTCGTTTTTTATGTGATTTGGTAGTGGGGGTTCGGTTTACGTTTTTGGAGATCGATCCTACAGCGTGATTGGAGGACCTGGTGTTCGATTTTGGGACTCTTTGCTTCACACCTGATTGGGAAATGACTGTTTATGAACTCTATATTAGACTATTAGTGTGCTGTGACAGTTATGTTCACTTGTGTTGTCATAAGAAGCTGGAAACATAGGTCCCAGTATCATCGATAATTAGTTATTTTGGTTTTGCTCTTATTTGTTTTGTCATTTTTAACTCACATGACCAAGAGGAAAATGGATAGATTTGAGTTGGAGTTGTTTTGTTATCTGCCAGTTTAATGATCATGTTCAGTATCTATGGTGAGAATGTCTATGCTAGTTGAAAACGTTTCGTCTAGTCAAAATAGGAATGAAGCGAGCATCTGTGCACAGTTCGAAGTTATACAAGTAAGATATTGCCTATCAATCGTAAACTGATAATCATGAGTTCATGACTTTAGCTAAATTTAGAAGTTAACGGTTTCATAAGTTCTAAGACTTTTTTCTGCAGAAATTTTGTACCTCATCTTGTGATACATTTGGTTCTGCCTTTTGTTTTTCACTTGACATGATTCAGAATCGAGATCTGCATTTGCTAGTGGACCAACAAATCTTGTAGCTAACTCTTAAGATATACGCTGGTCTTCATGCTAAATATTTTGATGAGCTGTGTCATGTGAGTGTGACTTGAGCTCTACAATATATTGCATTTTATTTCCTTATACATTTGGGCATTTGGCTTGGTAACAACATGTTCTTGATAGAAGTTTGTTAGTCATTGGTCAACTTGTACTTCTTTAGCATACAAACTCGGAGATAATCCAGTGGAATTTTGAAATGCCATCAGGCCCTGCTTTGGTGAGCTTCAGCTTTAACCTAAAAGCCGATAGCACAATATAAGCGTAAGGTCCTCCATACAGGGGAGAGCTTCTCTCTGTTGTTATTTAAGTTGTCTGAGTATTGCACGAAAAACAAATATAATGTTTGCTATGAGTGCTTGCAATTGGATTTGATGGAGTTCTGATGGTATCCATTTATATTTTGTATTTTGAAGGAATTCTTCTTGCGAGGGAGGTTTATATTTGGGCCTGATGTGAGATCCATATTTCTCACTATGTTCCTCATCGTTGCACCAGTGGTGGCCTTCTGCGTGTTTGTCGCCAGACACCTCATTGATGACTTTCCCGGTGATTGGGGTATCTCGGTGATGGTTGTGGTGGTTGTCTTCACCGTTTATGTAAGCATACTTGTACAGTCACTATTTCTTTTCTTCACATCTTATAATAATAAGCAGTGGAATTCTTAGCCATCACATCTCCCTTGAAATGGTTTCATTTAGTGTCCCAGATCTTGCACTGACCATGGTTGCTTTTCATAATTTTTTCTGCATGTATTTCTAAGGTTTATACATTTTCAAAATATACAAATAACTAATTTGTTTTCATTTTATAGGATTTGACGCTGCTTCTCCTTACTTCTGGTAGAGATCCTGGTATTATACCTCGTAACACTCATCCTCCTGAGCCTGAAGGCTTTGATGGGAGCAATGATTCTGGAGTTCAGACTCCACAACAGTTGCGTCTGCCTCGGACAAAGGATGTCATTGTAAACGGAATCAGTGTGAGGATTAAATACTGTGACACATGCATGCTTTACCGGCCACCTCGATGCTCACACTGTTCGATATGCAACAACTGTGTGGAACAGTTTGATCATCACTGTCCATGGGTTGGCCAATGCATAGGACTTGTAAGTATCATGTTTTTCCAGCAGTTCTGTACCTATCCTTACCGTAGGAAAGACATGTGCGTATTTGTTTGGAGTTATTCTTCCAGTGCTTTTCATTGAGCTCTCTTCAAATCAACTTGAGCCTAATCATAAAGCATATTTGGTGCAGCGTAATTATCGGTTCTTCTACATGTTTGTATTCTCGACCACGTTACTCTGCCTCTACGTATTTGCTTTCTGTTGGGTGTACATAATCAAGATTAGAAATGCTGAGAGTTTGTCAGTTTGGAAGGCAATGCTAAAGACACCAGCCTCAATCGTTTTGATCATCTACTGCTTCCTTTGTGTATGGTTTGTTGGTGGTCTTTCTGTCTTCCATTGCTATTTGATGAGCACCAACCAGGTAGGTATTAGTTCGATTCAGCATTAATTTCCTAAACACAACGATTTCAATTCATTAGCTAATCATGTAGCCCTGTTCTTTTGCAGACAACTTATGAGAACTTCAGGTATCGCTACGATAGACGGGCTAACCCGTATAACAGAGGCGTTCTGAACAACTTTCTAGAGATATTCTGCAGCCGTATTCCTCCTTCAAAGAACAATTTCCGGGCAAGGGTCACAGTTGAGCAAGGGCTACAGCAAACCCGTGTAGCATCAAGAGGTTTTATGAGCCCCAACATGGGCAAACCTGTTGGGGATCTTGAAATGGGCAGGAAGCCGGTGCCTTGGGATGAACCGAGGACAGCAGCTGATATCAGGGACTTGGAAGCAGGTCTCGGGGGCTTTTTGGATGAGAAAGAGGGTAGACTAACGCATGCATCCCCAGATCTGAGCAGGGACGACCTTCCAGCTGATCTCATGGAAGGACGAGCTGGCACACATTCAAGGCGGTCAAGTTGGGTTAATAGAACTGGAACTTCAGAATCAGTGGACAGTATGAATGCGCAAATAATTGCTGCTTGGGAAGCTATTCAGAGTGACCCTGTGCATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026580