Difference between revisions of "Os09g0103600"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os09g0103600| Description = PRP38 family protein| Version = NM_001069092.1 GI:115477923 GeneID:4346374| Length = 6774 bp| Definition = Oryza sa...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0103600|
 
GeneName = Os09g0103600|

Revision as of 20:54, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0103600

Description

PRP38 family protein

Version

NM_001069092.1 GI:115477923 GeneID:4346374

Length

6774 bp

Definition

Oryza sativa Japonica Group Os09g0103600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:391637..398410

Sequence Coding Region

391780..392254,394666..394736,394819..394948,397627..397717,397798..397919
,398014..398303

Expression

GEO Profiles:Os09g0103600

Genome Context

<gbrowseImage1> name=NC_008402:391637..398410 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:391637..398410 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaaccgcacggaccccctggcgaagagcatccacgggacgaaccctcagaacctggtggagaagatcgtccggtccaagatctaccagagcacctactggaaggagcagtgctttggcctcaccgccgagaccctcgtcgacaaggccatggagctcgaccacaccggcggcacctacggcggcaaccgcaagcccacccccttcctctgcctcgccctcaagatgctccagatccagcccgacaaggacatcgtcgtcgagttcatcaagaacgaggattacaagtatgtccgtgttcttggtgccttctaccttcgcctcactgccaccgtcgccgacgtctaccaatacctcgagccgctctacaacgactaccgcaagatcaggcacaagctcagtgatggaaagtttaccctgacccacgtcgacgagttcattgacgacctcctcaccaaggactactcctgcgatacggccctcccccgcatccagaaaagatgggttcttgaaacttctggaactctagaaccaagaagaagtgcacttgaagatgattttgaggaagaggaggaagacaaggaggatgaacaacctatggatatagatgagccaaatggtcgtgaaaagcatgatcattatcgtggaaggagccctactagagatcgagacagggagaggaaacatgaaagacaccacagggaccgagattacgacagagatcgggattatggtaggggacgggaaagagaccgagatagagaccgtgaaagagatagagacagggatagagatcgggatcgggatcgggatcgagaccgtcatcgcatacgagatgaggactacagtcgagatagggaccgagcaagagatagggatggcagggaaagagaacgctgggacagagaccgtgggaggcgcaggagccgttcaaggagcaggagcagggatcgacgagaaagagaccgagaagatggagagtaccgtaggaggcgtgatcggggtagtgccagtcctcgaggtcatgcggaggatggtggctcaagagatgagccgaagaagagaaaggaaaagaaagagaagaagggtgaaggaaatgcaccagatccaaatgacccagagattatagaaatgaacaagctccgagcctctctagggttgaaaccactgaagtag</cdnaseq>

Protein Sequence

<aaseq>MANRTDPLAKSIHGTNPQNLVEKIVRSKIYQSTYWKEQCFGLTA ETLVDKAMELDHTGGTYGGNRKPTPFLCLALKMLQIQPDKDIVVEFIKNEDYKYVRVL GAFYLRLTATVADVYQYLEPLYNDYRKIRHKLSDGKFTLTHVDEFIDDLLTKDYSCDT ALPRIQKRWVLETSGTLEPRRSALEDDFEEEEEDKEDEQPMDIDEPNGREKHDHYRGR SPTRDRDRERKHERHHRDRDYDRDRDYGRGRERDRDRDRERDRDRDRDRDRDRDRDRH RIRDEDYSRDRDRARDRDGRERERWDRDRGRRRSRSRSRSRDRRERDREDGEYRRRRD RGSASPRGHAEDGGSRDEPKKRKEKKEKKGEGNAPDPNDPEIIEMNKLRASLGLKPLK </aaseq>

Gene Sequence

<dnaseqindica>6157..6631#3675..3745#3463..3592#694..784#492..613#108..397#aggtccaggtccaggcccaggcctcttgtgtcttgtaatgtaatctagggttttgctccttctctcatccagtagcggcggccggcggcgagggcagcggcggcggcatggcgaaccgcacggaccccctggcgaagagcatccacgggacgaaccctcagaacctggtggagaagatcgtccggtccaagatctaccagagcacctactggaaggagcagtgctttggcctcaccgccgagaccctcgtcgacaaggccatggagctcgaccacaccggcggcacctacggcggcaaccgcaagcccacccccttcctctgcctcgccctcaagatgctccagatccagcccgacaaggacatcgtcgtcgagttcatcaagaacgaggattacaagtcactaccctactcttctctcttcttcttcttttttttgttctttttgttctttgccttcctactactctcttcctaatgaatgaatctgcaggtatgtccgtgttcttggtgccttctaccttcgcctcactgccaccgtcgccgacgtctaccaatacctcgagccgctctacaacgactaccgcaagatcaggcacaagctcagtgatggaagtatgcaccgccaattcttttcttttcatttctgcttattatttattttcctgctaattagatacatgttctcctttcagagtttaccctgacccacgtcgacgagttcattgacgacctcctcaccaaggactactcctgcgatacggccctcccccgcatccagaaaaggtctctttctttttccttactcccctcactcactcttctattcttttacagttaaaagaaatccctatttacatttattgaaatgaaatcagaaaatgatcgaccacttacctaaaagaaatccctatttacatttattgaaatgaaatcagaaaatggtcgaccacttaacgcaatgtttttattttggagtcatgttgggtcacataatactacctagttcattttctaaacatgctggatcacagtatcagccagcacatcctgcaataacactctggtaatttatggaaccaaccttcacataggtgatttcacatacatcatttgctatgatattacattcaaatccatagaatgcgagacagccacacatggaacatgttaacacgaagaacaaaagcacttgtggagccatacaaacttctttttggcgggctacatatatatctttttttggacaaaagcacttctggagccatgtgaactagtcagtgagctatcttttttttttaaaaaaaaagaattagtaggctatttttactgtttcacatcgttaacaaaagaaatatttgatctttgaaggcatatattaacataacctatgaacataagagggaaaagagatgcagagctttgaaagaagtgttagttgaacatgagcattgtacagttacatttgttacaattgtagaggagttttaccccagaaaatttgtaaatcttttgcatccccaatattcgtatcttctaccacagagatccccttactaaaacagtgttatatgatctggggaacaagtgttaccgcagacaattgatctagttatcttcacagaaatttgtagtttgtattctgctcatctccatttgcgttgaaaaatgaacagaaaacaacctgaacttccattctatgttgccaaatttgggagtctcaatgttttttggatctcacatattgacaaaactagatttcatcatacccactttttcttggtttactcaagtttagccaacactaattatccagaaactcaaaattctgattctgaaccaatacaggtctcagttgttttttagcaaagcaagtaccctgtttcaggagtcttgaatgcaagtggaaaatttgtggtatgcaaaggaaacattttcagttgcaaccgataaagtatcaacgagaaaagaaaccaatccaatggtgaagtgccatagatagctggcctggcatttgtttcatttgcagaccaagcaccaaccatccattatgtgcgcatttccttgatcaaacatttaacatcatccttcttgattgctgacttaatcacgcattgcaataattatggatgggtcataactaaggcgtagttcatgatccagtggcgagcggaatgctgcacggttatctgtataaaccaaatagcatgctagtaaaaactcagtttttgcttgtacaatccaaacataaattctataaaatcaccctaacagaataattactaaagactagttttcccaaatgttttgaataaaacctattttgttaaaaataaaactaatctctaatcaatgggatccaaacggtcacttataggtctgataatcttttggaaaggcagactggctaaccagcgaacccacttataggtcaaaataagtggtttagccgcttatttgacctataagtgggttcgcaggttagccacttacacccttagcagaggataagtttttttctatcattttctataacaattcccacaacatcgaaaatgctatcaccatcatattataacactgcaatccctctccccactaaatgggatattacactatgaataagactgaaatactggcctctcatacagttgcggcagcaaatcaggtgccaaattaaataacagaagaaaaaggcaataattttgaccaatttgagcattcattttagtcacaataatatttcgtgtttcagaactttgtatagaaagaacatgttattttatcaattgtttttttagtcttgaaatccaatttaaacgaacacaagatactctatactcccgtcgttccctttaacatctcgtttaggacattgacatggtaatgcactacgattgatcactaccttttctaatcacatgttcaaaaaaaattaaaaacattaaaagcactatgattgacggaagtatctttcattaaagatctgatttgtcatttttacatcaggtcttattattttttcatatgctagtgagttgtaagattttgaggtttgaccacgagcattctaagacgtcatctatttgagagtatattagtaactacattgtgtattctgaacttgtcttgttttccagaatttgcatgtgcgacttgttaactaatgttctgtttctttctccatacatgtgagattaggtttcacttggagagatcatatttattttacgtggatcacacttgttgacgggctgtagttcacaaggtgtttattaattttgagatggcaacagtagcctaatcaccatattcttaattaaatgattaggtcatgatgtgtttatctgtttttgaataatctggtttgattagaaaatatctttgctttgatgtgtcagcagtgatggttcgagaattccataaactaaaaaaaaaatcattttcatgaatcctttgtacagatgggttcttgaaacttctggaactctagaaccaagaagaagtgcacttgaagatgattttgaggaagaggaggaagacaaggaggatgaacaacctatggatatagatgagccaaatggtcgtgaaaaggtaaacatatgttaaacaaatatacattgaaaccacatactttattgaccatatgtgttgacttctcttttactatctttagcatgatcattatcgtggaaggagccctactagagatcgagacagggagaggaaacatgaaagacaccacaggtatgctaatttatgtgaattgcctataggcgtggtagttactgagttatcattagtttttcttgaagttcttgatctgtgtagcatagatatttccttttatggaaatgagaatcaggaggtgagagctaactgggacatgttcatttgatagcaagctgttaatacttgccagaaaccattctattgatcatctgactatctgagtgcttcttaacgttcaaaccaagagtgttttaaatacctttcaactggttgaggatcgaacagtccaccttgttttactgatgttgattatgctactgcttccgtgcacaagtcatattagcttgggcaatatcaagtgaaactttaaggcacagtcatttctctatctttgttttggtaaccagagaataggaatccaccttccgttgttgttactcattacaatagatgaaggcgtggtacagctcttaaaaagctgaaactattgtgaagtttgatcttttaagaatagttttaggtagattttttcttgtcttagcaatcatgaaaaaagagttgggccatggaagtggggaataagttccctgaggctatgattggtcctaaaatcaaattctaaaatttaaaatcagcttcaacttttaataaaaagctctgggtcaatttctgcagaaatctttttaatttttatcatgtgctaaggtttgtgatgtaaaaaccactgggaggtagctgtgcagtgttggctgctaggggataaagggaggactgggatgaagagtactggagagtgattagattaaatattcctccttgcttcattccaaaggactagctcaatagccattatacagttggcattgataacctactaatctaatcaaatccctatctaaggaaacctcctccaatgcatcgtaatcacgtgcctcatgctcctcacgtgcactgaggttgagattgcctccctttggctagatgattgccctggtcatgggaggctcatgcccatgacagttttactgatgtttcttgatttattgacgcaaaatatttctggtgagctcaggcatttgttattgcttttcaaacacatagtagtaaaattcatttaccttctgtctttacggctgatgaagaagactagttttgaagatgtgagtgatgccatgatattccaaagcttactaaaaactgtatatggtctctttttgctaaatatggtcacgttactattgtttctttctatttttgccaataaatgatgagctacaaaagatttgtttttttcgtgtcacgtctgattaattctttctttttttttaatgcccaatatcttgaccgaagcatggaggtcaaaataaatagaataataatgaatggaaaaaagagaaaatccttagctcgtttagctttgtcgaaatggaaacttggttcatgcttgattgaatatttttttcgaaagttcaactaaataaaggcattccgtttcaactactaatgtaagttgcatattgttaaattttaaaatcaagttcatccgttccaaatgaatcgactggctgctccatattttaacctgtgttgaatgtacattacccttcatttgttcagtaaagaagcttgtttttataattctgatttaataatataggaaaaaagagcagtggaaaagttttcatgggcataatttgaaaagagattccctgtagtgtagtctagctattgctgattgaagcggtgtctacctgagctgcatttggttttcttaattgcatactggaagctgttcctgtgacataacactgttgcatggactaattactgccatggcatgttatcgtcaagagccattggtaggtcagccgcttcctagagtgaatgtgatcatgaccctgccaggtttctctgcactgacagtgtgcagtgagaagtatgatgggttggacagattaacaacttataaactataaggtgggttggacagcttaaaaattagaaagtataaaatgtttcaaatctaaacgttttgcctttttgtagctgatttgttttagttcatgtttcagtttgtatcaggttcctgctgctttggctgtactttcagcttttgacagcatgaactgtgcgaattatattgttagggagaatagaatgtgaacaacctcgaaattttttaatgttggattcttgagcaagtacagctcaacatatgctgtaagaacatttctatgtgcatactaaagtttggtgccatcttaatatggcaccacttgttttgatgctaaatatattgcggaataccttcatttgtttatcataaattgggacctgctgttctatttgtaatacttgcaatagctattgatatctgttgatttgaccgcattttgaaatgcttctgttttttatgtgtattccagggaccgagattacgacagagatcgggattatggtaggggacgggaaagagaccgagatagagaccgtgaaagagatagagacagggatagagatcgggatcgggatcgggatcgagaccgtcatcgcatacgagatgaggactacagtcgagatagggaccgagcaagagatagggatggcagggaaagagaacgctgggacagagaccgtgggaggcgcaggagccgttcaaggagcaggagcagggatcgacgagaaagagaccgagaagatggagagtaccgtaggaggcgtgatcggggtagtgccagtcctcgaggtcatgcggaggatggtggctcaagagatgagccgaagaagagaaaggaaaagaaagagaagaagggtgaaggaaatgcaccagatccaaatgacccagagattatagaaatgaacaagctccgagcctctctagggttgaaaccactgaagtagtaaccttgatgtaatgcacctgatgtttgagcgcctttagctttagcttgaaaccatgatttttctgacgacttaagcagtaccgcctgtcaaagagtacagcgtaggtgtaattacctgttgccatattattacttcgctgt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0103600, RefSeq:Os09g0103600