Difference between revisions of "Os11g0133600"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os11g0133600| Description = Similar to Heterogeneous nuclear ribonucleoprotein H3 (hnRNP H3) (hnRNP 2H9). Splice isoform 6| Version = NM_00107220...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os11g0133600|
 
GeneName = Os11g0133600|

Revision as of 21:14, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os11g0133600

Description

Similar to Heterogeneous nuclear ribonucleoprotein H3 (hnRNP H3) (hnRNP 2H9). Splice isoform 6

Version

NM_001072202.1 GI:115484016 GeneID:4349693

Length

2037 bp

Definition

Oryza sativa Japonica Group Os11g0133600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:1533912..1535948

Sequence Coding Region

1534226..1534242,1534879..1535758

Expression

GEO Profiles:Os11g0133600

Genome Context

<gbrowseImage1> name=NC_008404:1533912..1535948 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:1533912..1535948 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtacggtcaccgcggggcaatgatgggaggcgggggggtttcggatgggtacgagggatcaaagaggccacgaatgatcgaatccaatccatacttcgcagtgaccgcaggcagtcccttggatgtctcaaagagggccaggatgatggaaccagcccctccctatttcggagccatgggcagcagcgctgctggtggcaccagtgccttctaccagccctacggcgccaacttacctggtgcaggggctaacagtgccatccagaactttccaggggtccgtctacgagggctcccctttgactgcgacgatcttgacatcttcaagttctttgttgggctggacatagtggactgcctcttggttcacaagaatggccgcttcaccggcgaggcttttgtcgtattcccatcagccatgcaagcagagtttgcactgcaccgcaaccggcagaacatgggcaggaggtatgttgaggtgttcagatgcaagaagcaagagtactacagcgcaatagctgctgaggtgaaccagggcggcttcttcgactcggagtaccgtcactccccacctccacggcccaagaaaccagctgaagacaagagcagcatggaatatactgaggtgctcaagctccgtggcctgccctactctgctaccactgaagacatcatcaagttctttgtggagtatgagctgacggaggaaaatgtgcacatcgcgtaccgtccagatggtaaggccactggagaagcctttgtggagttcccaacagcagaggttgcaaagacagccatgtgcaaggacaagatgaccattgggacaaggtacgtggagctgttcccatcaaccccagaggaggccagcagggcgaaatcgcgagccaggcaatga</cdnaseq>

Protein Sequence

<aaseq>MYGHRGAMMGGGGVSDGYEGSKRPRMIESNPYFAVTAGSPLDVS KRARMMEPAPPYFGAMGSSAAGGTSAFYQPYGANLPGAGANSAIQNFPGVRLRGLPFD CDDLDIFKFFVGLDIVDCLLVHKNGRFTGEAFVVFPSAMQAEFALHRNRQNMGRRYVE VFRCKKQEYYSAIAAEVNQGGFFDSEYRHSPPPRPKKPAEDKSSMEYTEVLKLRGLPY SATTEDIIKFFVEYELTEENVHIAYRPDGKATGEAFVEFPTAEVAKTAMCKDKMTIGT RYVELFPSTPEEASRAKSRARQ</aaseq>

Gene Sequence

<dnaseqindica>315..331#968..1847#cccctcctcccccgcgctctccctctccccctcacgccgtcgcgtcgctgtccccgacacctccgcctccgcctcccgctcccgccgccgcaggtccgccgttcgccgcctccgttgccgaccgccaccgccccgcgccgccttccccgcctcagcctccgcctccgcctccgcctccgcctccgcgcatcgcaacgcaacctcaggcgcagaggcggcgacttgactcccccctccccgccctctcgctctagggtttcctcccctccccgtcgtcagccgccaccccaccccctcccccgccgggcttcgccatgtacggtcaccgcgggtaagccaaccccctcctcctcttcctttctctcttattcctgattcatctccgcaattccatcccgccgattcatccattactttctttttttttccctacaatacttgcttgcttacgcgatctcatcaatttctcgattctattagggataatttctaagtagttcactttgctttcctaccatgatatgatatgatatcttctgcctaggatttaggatacatgtacagcttcccccttacaaaaccaaacccctctcccccaataaataaataaataaataaatcggaggcagtaatacatccaaattgatgtttcatcaactgcaccagcatcccaactgtggtttgtaacattcttttctactcatatgtgttatccagtagtttgagtatttcttctattcacatgctgccaacatttaattagtttttgtttatgtccactaatgcgttcgcatttcgactccattacctttttaagccttcaagtcctgtttagattactagtatttcttatctgtgcagttatctttatgtttgggttattttatatgaaatggggattgagagatgaggggatcgtctccttttttttttcttttctctttttgggactctggattatctgaagggcaatgatgggaggcgggggggtttcggatgggtacgagggatcaaagaggccacgaatgatcgaatccaatccatacttcgcagtgaccgcaggcagtcccttggatgtctcaaagagggccaggatgatggaaccagcccctccctatttcggagccatgggcagcagcgctgctggtggcaccagtgccttctaccagccctacggcgccaacttacctggtgcaggggctaacagtgccatccagaactttccaggggtccgtctacgagggctcccctttgactgcgacgatcttgacatcttcaagttctttgttgggctggacatagtggactgcctcttggttcacaagaatggccgcttcaccggcgaggcttttgtcgtattcccatcagccatgcaagcagagtttgcactgcaccgcaaccggcagaacatgggcaggaggtatgttgaggtgttcagatgcaagaagcaagagtactacagcgcaatagctgctgaggtgaaccagggcggcttcttcgactcggagtaccgtcactccccacctccacggcccaagaaaccagctgaagacaagagcagcatggaatatactgaggtgctcaagctccgtggcctgccctactctgctaccactgaagacatcatcaagttctttgtggagtatgagctgacggaggaaaatgtgcacatcgcgtaccgtccagatggtaaggccactggagaagcctttgtggagttcccaacagcagaggttgcaaagacagccatgtgcaaggacaagatgaccattgggacaaggtacgtggagctgttcccatcaaccccagaggaggccagcagggcgaaatcgcgagccaggcaatgaattatttgatccagtcatctactttgccctggccttgagcagctgtgttccagtttagctttcgctttgcatccttaaactgtatccctcgcctttaggtttgtgtgcgtgtgttttagtatgcatcatgttgctaccctgccacaacccgttggtgtggtgactttataagaacccgaattgcaatttt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0133600, RefSeq:Os11g0133600