Difference between revisions of "BGIOSGA027857"

From RiceWiki
Jump to: navigation, search
(Created page with "{{IndicaGene| GeneName = BGIOSGA027857| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027857, complete gene.| tag = P0007D0...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA027857|
 
GeneName = BGIOSGA027857|

Revision as of 17:09, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA027857

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027857, complete gene.

LocusTag

P0007D08.11

Ensembl Transcript ID

BGIOSGA027857-TA

Ensembl Protein ID

BGIOSGA027857-PA

Length

2397

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:547788..550184

Sequence Coding Region

547788..548034,548138..548273,548454..548523,548642..548735,548831..549044
,549160..549301,549480..549650,549990..550184

Genome Context

<gbrowseImage1> name=IndicaChromosome08:547788..550184 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:547788..550184 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCTATCACCTCCGCTTCCCGCCGCGCCGGCGCCGCCGCGCTCCCCATCCTCCGACGAATCGGCGGCGCGTTCCGCCGCCCCTTCTCGTCGGAGCCGGACCCGGCATCCTCCCCGGGGTACCACGTCGCCGGCGGGCCCAGCTTCATGCGCGGCGCGGTGTTCTGGGAGCCCGGCCGCCCTCTCACCCTCGAGGACTTCCGCATGCCGCGCCCCAAGGCCGGCGAGCTCCTCATCAAGACCAAAGCTTGTGGAGTTTGCCACTCCGATCTCCATGTTCTCAAGGGTGAGCTCCCATTCTCCAGCCCCTGCGTTGTTGGGCATGAGATCACTGGGGAGGTTGTTGACCATGGTACTCACACCCCTGCTGAGATCATCAACAGGTTCCCAGTTGGCAGTCATGTTGTGGGTGCCTTCATAATGCCCTGTGGGAATTGCTTCTACTGTGTTAAGGGCCAAGAAGATCTGTGTGAGTCTTTCTTTGCATACAACCGTGCTAAAGGAACGCTATACGATGGTCAAACCCGATTATTCCTTCGTAGCAATGGAAAGCCAGTGTACATGTATAGTATGGGTGGGCTTGCAGAATATTGCGTTGTGCCAGCCAACGCACTAGCAGTTCTTCCCAACTCTTTGCCATACACAGAGTCGGCGATTCTAGGATGTGCCGTGTTCACTGCATACGGCGCCCTGAGGCATGCTGCTGAAATGCGTGCTGGGGATTCAGTAGCTGTGATTGGAGTCGGAGGGGTTGGGTCAAGCTGTTTACAGATAGCCAAAGCCTTTGGAGCTTCCGAAGTCATTGCAGTGGATGTTCTTGATGAGAAACTCCAGAATGCTAGAACACTTGGAGCAACCCATACTGTAAATGCTGCAAAAGAAGATGCAGTTGAAAAGATTAAGGAAATTACTGATGGGAGGGGTGTGGATGTAGCTGTGGAAGCACTTGGTAAGGCATTGACATTTTCTCAGTGCGCCAAAAGTGTACGAGATGGAGGCAAAGCTGTTATGATTGGCCTTGCTGCCACAAATGTGATGGGGGAGGTGGATATAACCCGTCTTGTTCGCCGACAGGTGAAGATCATTGGGTCGTATGGTGCAAGGGCCAGGCAAGATCTTCCTCAGATAGTCAAGCTTGCAGAGAGTGGGGCCTTCAATCTTAAGAACACCATATCAAGGAAATGCAAGTTTGAAGAGGCGAACAGCGCTTACGAGGATCTTGACCGTGGCAAGATCGTTGGGCGAGCCGTAGTTGAGATCATGTCGTAG</cdnaseq>

Protein Sequence

<aaseq>MSITSASRRAGAAALPILRRIGGAFRRPFSSEPDPASSPGYHVAGGPSFMRGAVFWEPGRPLTLEDFRMPRPKAGELLIKTKACGVCHSDLHVLKGELPFSSPCVVGHEITGEVVDHGTHTPAEIINRFPVGSHVVGAFIMPCGNCFYCVKGQEDLCESFFAYNRAKGTLYDGQTRLFLRSNGKPVYMYSMGGLAEYCVVPANALAVLPNSLPYTESAILGCAVFTAYGALRHAAEMRAGDSVAVIGVGGVGSSCLQIAKAFGASEVIAVDVLDEKLQNARTLGATHTVNAAKEDAVEKIKEITDGRGVDVAVEALGKALTFSQCAKSVRDGGKAVMIGLAATNVMGEVDITRLVRRQVKIIGSYGARARQDLPQIVKLAESGAFNLKNTISRKCKFEEANSAYEDLDRGKIVGRAVVEIMS</aaseq>

Gene Sequence

<dnaseqindica>1..247#351..486#667..736#855..948#1044..1257#1373..1514#1693..1863#2203..2397#ATGTCTATCACCTCCGCTTCCCGCCGCGCCGGCGCCGCCGCGCTCCCCATCCTCCGACGAATCGGCGGCGCGTTCCGCCGCCCCTTCTCGTCGGAGCCGGACCCGGCATCCTCCCCGGGGTACCACGTCGCCGGCGGGCCCAGCTTCATGCGCGGCGCGGTGTTCTGGGAGCCCGGCCGCCCTCTCACCCTCGAGGACTTCCGCATGCCGCGCCCCAAGGCCGGCGAGCTCCTCATCAAGACCAAAGGTCGCATCATTGCAGCCATCTATCGTCTGCTGCTCCTGCGTTTCTTTGTTTCTTTGTTTGTTTCCTCGAATTATTGAGGCTGACGCTGGCCCAATCTGTGCAGCTTGTGGAGTTTGCCACTCCGATCTCCATGTTCTCAAGGGTGAGCTCCCATTCTCCAGCCCCTGCGTTGTTGGGCATGAGATCACTGGGGAGGTTGTTGACCATGGTACTCACACCCCTGCTGAGATCATCAACAGGTTAAGTATATTATACTGATGTGACTGACCCAGCTGGTATTATCAAGAAACAACCTATGCTTGCTTGTTTGTTTAGGCTGGTGAATGTATAGGCATGCGTGTTACTGTAAACTTGAGGTTGTGGATTGTGGATTGTGGACTTGGAATTGATTGATTCTTTCTCCCAAAAACATATTTTAGGTTCCCAGTTGGCAGTCATGTTGTGGGTGCCTTCATAATGCCCTGTGGGAATTGCTTCTACTGTGTTAAGGTAAGTAAATAATAATAGTACCTTCTCCTTCATGCCATTCTTTCCAAGAGAAAAAAAAAAGAAGAAGAGAGGTTGCTTTGCTTTCTTGATTGCACACATGTACATCGACTTGATATAGGGCCAAGAAGATCTGTGTGAGTCTTTCTTTGCATACAACCGTGCTAAAGGAACGCTATACGATGGTCAAACCCGATTATTCCTTCGTAGCAATGGTAATCTTAAATATACAACTCCTCACATGATATGTGGGTAATGATACAGGTATAACTGTGCCTTTGCTTACAGCATTCTTTTTATGCATTTCCAGGAAAGCCAGTGTACATGTATAGTATGGGTGGGCTTGCAGAATATTGCGTTGTGCCAGCCAACGCACTAGCAGTTCTTCCCAACTCTTTGCCATACACAGAGTCGGCGATTCTAGGATGTGCCGTGTTCACTGCATACGGCGCCCTGAGGCATGCTGCTGAAATGCGTGCTGGGGATTCAGTAGCTGTGATTGGAGTCGGAGGGGTTGGGTCAAGGTTAGCTGATATGAGATGTCTTCATCCATGCCTCTCTTTTTTTTTTTTGACCTTTTGAAATAAGCTGAGTGAAATTTTTTACTTTTCGTATGTCCTCATAATTGGAACATTGCAGCTGTTTACAGATAGCCAAAGCCTTTGGAGCTTCCGAAGTCATTGCAGTGGATGTTCTTGATGAGAAACTCCAGAATGCTAGAACACTTGGAGCAACCCATACTGTAAATGCTGCAAAAGAAGATGCAGTTGAAAAGATTAAGGTATTTGTTAACTGTCAAGTTTTCTTAGCTACTTAACCACCAGCAGTTCAAAAACAACTCGAATTCTGTTTTTAATTTCCCGTTGCTGATCTTAATATGCTATTTCCCGTCTTCTTCAAGTGTCCATCTTGAAAATTTCCCATTGAATGTGATTATTTGAATATCTTACTGGCTGCAGGAAATTACTGATGGGAGGGGTGTGGATGTAGCTGTGGAAGCACTTGGTAAGGCATTGACATTTTCTCAGTGCGCCAAAAGTGTACGAGATGGAGGCAAAGCTGTTATGATTGGCCTTGCTGCCACAAATGTGATGGGGGAGGTGGATATAACCCGTCTTGTTCGCCGACAGGTACAGAAACTAGCTCCAATGAAGTACTATTGACTTGGTTTTCTAAGAAAGAGAAGAGAGATACTAATACCTTCTTGGTACAAACAGCAAAGCCATTTGAGCTACTCATTCAGTCTAGATGCAGATACTTTCTTCTTGTTCTGCTTGCAAAAGAGGACCATAACATCTTAAACATAGGAACTACTAAACTGCAACATTGTGATAACACATTGCATTTGTTGTTCTGTTGATTCACCATAAATTTGCAATAGCCCCACACAAAAAAACATAACATCAACTGAATTGCTTTCTTGAATTGTACTATTATGCTTGTTTATTTACATGTTCACATGGGACCAGGTGAAGATCATTGGGTCGTATGGTGCAAGGGCCAGGCAAGATCTTCCTCAGATAGTCAAGCTTGCAGAGAGTGGGGCCTTCAATCTTAAGAACACCATATCAAGGAAATGCAAGTTTGAAGAGGCGAACAGCGCTTACGAGGATCTTGACCGTGGCAAGATCGTTGGGCGAGCCGTAGTTGAGATCATGTCGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027857