Difference between revisions of "BGIOSGA028575"

From RiceWiki
Jump to: navigation, search
(Created page with "{{IndicaGene| GeneName = BGIOSGA028575| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028575, complete gene.| tag = OS08G03...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA028575|
 
GeneName = BGIOSGA028575|

Revision as of 17:13, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA028575

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028575, complete gene.

LocusTag

OS08G0377100

Ensembl Transcript ID

BGIOSGA028575-TA

Ensembl Protein ID

BGIOSGA028575-PA

Length

5480

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:18950818..18956297

Sequence Coding Region

18950818..18951029,18951680..18951937,18953224..18953335,18954029..18954215,18954750..18955495
,18955967..18956122,18956208..18956297

Genome Context

<gbrowseImage1> name=IndicaChromosome08:18950818..18956297 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:18950818..18956297 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGAAGGGTGTCGGCTACGGCAGTTGACGGAGCGCAACTGCACTGCCAGAGTGCACAAGGATGTGCTGAGGAATAAGCACCAGAATGGAGGAAGGGTGTCGGCTATGGCAGTTGACGGAGCGCAACTGCACAAGGATGTGCTAAGGAATAAGGAGTGGATTCGGATAACACGTAAAGGGCAATCTATGACCTATGAAAGCTGCCGGATCTATACCCTTCTCCCACGGAAGCGTTACTTCTTTTGTGGATCCCACCAACAACTAAAGCCTATAAGGTTCAATTCTGCCTATATCATCGACCTCTTGTTGTTCTTCACCAACTCTGAGCACTTCTTCTGCCTAACGAAAGCAAAGAAGCAAAGATTTGAGTTAATCGGCATAATGGACGAGTTAGGGATCATCGAGGAAGGTGTCGATTGGAGGACCCGCCTTGGCCAGGATATTCGCGATAGGGTAAAACGTGACATATTGTTCAGCCTGCAGATGAAATTGCAAACAACTACTTCTACAACATTGATTGATCTTCAAAAAGTTGCTGCTAGAATAGAGGAGAGAATCTACAAAATAGCTATTGACTTTGGTGATTATCTACGGAGGATTAGTCTGATAAAAGGCGATTTGGATGATTCGTATCCTCTGATGTTGAACAATTTTCTGCATATTCATCAGCAAGCTTCAACCTCTTCATTTTTCTTGCTCCATCAGAAGAATAAGCAGGGCCAAATTATCCAGGCAGAAGGAAATGTTCAGGGGACATCATCTAGCAGCCACAAGGAACCCTCCCATCCCCATGGAAAAGATAGGATCAGCGAACTCCCAAATGATCTGATCCACCACATAATGTCCTTCTTGTCGATGAAGGAGGCGGTGCGCACGAGTGTCCTGTCCCACTGGTGGGTCAACAAGTGGACTTGCTTGCAGTCAATAAAGCTTGATATAAATTGGTTTCGCCTAGATAGGGAAAAATTCCGTAGTTCTATTGACAAACTATTGCTAAGCCGCGACCATCTTGATGCTCCTATGGATACATTCCAGCTAGATTCTTTTGCAGTGGACCGGGCCAGTTCTTGGATCAACCATGCTATCAAGCACAACGCTAAAGTAGTTAAATTTTCTGAGTATCCAAGTTGGGAACCTTTTTACTTGGATCCAGAACTTGTGGAGTTCAGTTCTCGGTATCTAAAAACATTGGAGCTGACTAATGCAGCTCTAAATGAGATGGTATTTGATCGTCTCAATAACGCATGCCCGGTTTTGGAAAATCTGGTACTAAAAGAGTGTTTAATGGAGGTGCAACACATTTCTTCAAGTTCACTACAAAATTTGGATTTGATCGGTTGCTCTCTTCTCTATAATGTAAGCATCTGTACTCCGAGTTTGGTCTCGTTGTGCATCAAGGGTCAACAAACGGGCAGTTCTTCATTTACAAACTCTTACCTGACATTCACAACAATCACTCTCGTTGATGCTTCAGATGTCACAAGCATAGAGTTGACAGCTACTGATAGACAGTTTACGTTCATGGAACAGCAAGGAAGTAGGCAGATGTTTAGGAATCTCAGAACCTTGCGCTTGGGTGAATGGTGCATGGCCGATAATTTCTTGCCTCTACGCCAATATGTCAACCACTCACCTGTTTTGAGGAAGGTGTTTCTGAAGCTCAGTCTGGTGGATTGGTGGTCCGAACTCACGACCAATCAGTTGATGGCATTAGTCGAAATTAGCAGTGGAGGTTCCGTCAGTATTGACTTCTACTAG</cdnaseq>

Protein Sequence

<aaseq>MEEGCRLRQLTERNCTARVHKDVLRNKHQNGGRVSAMAVDGAQLHKDVLRNKEWIRITRKGQSMTYESCRIYTLLPRKRYFFCGSHQQLKPIRFNSAYIIDLLLFFTNSEHFFCLTKAKKQRFELIGIMDELGIIEEGVDWRTRLGQDIRDRVKRDILFSLQMKLQTTTSTTLIDLQKVAARIEERIYKIAIDFGDYLRRISLIKGDLDDSYPLMLNNFLHIHQQASTSSFFLLHQKNKQGQIIQAEGNVQGTSSSSHKEPSHPHGKDRISELPNDLIHHIMSFLSMKEAVRTSVLSHWWVNKWTCLQSIKLDINWFRLDREKFRSSIDKLLLSRDHLDAPMDTFQLDSFAVDRASSWINHAIKHNAKVVKFSEYPSWEPFYLDPELVEFSSRYLKTLELTNAALNEMVFDRLNNACPVLENLVLKECLMEVQHISSSSLQNLDLIGCSLLYNVSICTPSLVSLCIKGQQTGSSSFTNSYLTFTTITLVDASDVTSIELTATDRQFTFMEQQGSRQMFRNLRTLRLGEWCMADNFLPLRQYVNHSPVLRKVFLKLSLVDWWSELTTNQLMALVEISSGGSVSIDFY</aaseq>

Gene Sequence

<dnaseqindica>1..212#863..1120#2407..2518#3212..3398#3933..4678#5150..5305#5391..5480#ATGGAGGAAGGGTGTCGGCTACGGCAGTTGACGGAGCGCAACTGCACTGCCAGAGTGCACAAGGATGTGCTGAGGAATAAGCACCAGAATGGAGGAAGGGTGTCGGCTATGGCAGTTGACGGAGCGCAACTGCACAAGGATGTGCTAAGGAATAAGGAGTGGATTCGGATAACACGTAAAGGGCAATCTATGACCTATGAAAGCTGCCGGATGTAAGTGGGCCCGGCCGAAATTCTAAGGCGGGAAGAAGAGGGAGAGAAGCACCGGAATGGAGGAAGGGTGTCGGCTACGGCAGTTGACGGAGCGCAACTGCACAAGGATGTGCTGAGGAATAAGGAGTAGATTCGGATAACGCGTAAAGGGCAGTCTATGACCTATGAAAGCTGCCGGATGTAAGTGGGCCCGGCCGAAATTCTAAGGCGGGAAGAAGAGGGAGAGAAGCACCGGAATGGAGGAAGGGTGTCGGCTATGGCAGTTGACGGAGCGCAACTGCACAAGGATGTGCTGAGGAATAAGGAGTGGATTCGGATAACGCGTAAATAGAATGGGTAGTCCGGATACCCCATACAAAGACCAAATAAACTGAAATAAGAATTGGCCTTTGCAAACCTGAGACCGACGTCGGGAACATTGACCAGTGCTTCAGTTTTTTTGGTTTTGTCTTGGTTATTTTGGGTTTAATTTTCGGTTTCGATTTTTTTAACCCTAGATATTGGAAGTCAATTGCCACAATTTTATTTTGTATAGGTCTCTATTGAGGTTCTAGAAGCTACCTCACATGTTATAAGCTAGGTGATGTTGTCAAGTCATGTGGGCCATATCCTTCTCCCGTGTTATAAGTAATTTTGTCATGTCATGTGAGCTATACCCTTCTCCCACGGAAGCGTTACTTCTTTTGTGGATCCCACCAACAACTAAAGCCTATAAGGTTCAATTCTGCCTATATCATCGACCTCTTGTTGTTCTTCACCAACTCTGAGCACTTCTTCTGCCTAACGAAAGCAAAGAAGCAAAGATTTGAGTTAATCGGCATAATGGACGAGTTAGGGATCATCGAGGAAGGTGTCGATTGGAGGACCCGCCTTGGCCAGGATATTCGCGATAGGGTAAAACGTGACATGTAAGTGCCCCCTCCTCGTCTCTCTCTTCCCCTATTCTTACTTTTTTTTCCATGAGAAATTGATTACAAAGTTTTGAATTGATGATAGTTTATTATCAAGATTGGAAATCGTCATCCATGCTATACTTGTTAATGATCTAACTGAATCATCATATCGGTAGTCAGATCCAATCTGATGTTTTCTAGATTTAAGTAACAGTTAGATTTGTTTGGTAGAGCTACAAATCTAATATGTAGCTGAAGTTCTGGATCCAAAAAAAGGTAGCTCCACCCTTTCTGCATATCTTGTGGAGCAGATCCACGCACTTCACTTTTAGAAAACTGAGGATCTAGTATTGTTTGGTTCAACTCCGGCTCTAACTCTGCCATAGGCCCAAATCACCTAAAAATCATTGTTGTTCTGGGCAAAACGTTGTTGATTGGACTCAAACCTTTGTATTTTGATCGTATCCAAGTATAAAAGGTAAGTTGTTTCATATTTAGAAAATTACCCTAGTAAATGAATCATCGCCAAAAGAAAATGAACTAAGTTTGCATGTCAATAGTTCCGTACTAAATTATGTGGCCAGTTCCTTGCATGGTGCATGGGTATAAGCTTTATGGACTAGTGTTTTAGTTCTGCTCCTAATTTGTTCTGTCTTTCAAATTTTTTGGCTAGCATATTTAATTTGGAGTAGGTGTTAAAACCCTTAAGGTGATTCATGTTCCCACCTTGAGGGAGGAGGAAGAACTGGAGAAGTCATGGTGTTGGACTGTTGGTTCTGCAATTGTGTAACTGAGTCCACCTTACACAATGAAAAATATATGAGATGATGCAGCTACTCCGGAAAAAAGCAAAAATCTGTTGGTAGATATCACTTATAGGTTTAGGTGCTTTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTGGGGGGGGGGGTGGATGTAGGTGGTAAAACTTACAAGAAAGATGGTCCCATGTTCACACATCCATCTTGTTTTGTTTGTCGTATACATAATTCCTCCTTATTATTGGTTATGAATGCTCTCCTCCAAACTCTTAGCATACATGATGGCACAAATTTGCTAAAATATGACACTTTTGGTTGGACAAATGATATTTCAGTATTTATGAGAATGTATCTACTATTCCAAACATGTTACTTTCACAAACATGCATTTCTCAAACAGTGAATATATAGCATGCATGTATTTCTTGACTGGCCACATTTTGGATTAATATTAAACAGTGAAGTACCATAGTGAAATATTAAATATGTTGTATTAATATTTGGTATTCTGCTTGCAGATTGTTCAGCCTGCAGATGAAATTGCAAACAACTACTTCTACAACATTGATTGATCTTCAAAAAGTTGCTGCTAGAATAGAGGAGAGAATCTACAAAATAGCTATTGACTTTGTACGATGGTTTGTTCTTAATAGTTTTTTATGCAATCAAATTTCCTTAGGTATTAAATTTTATTTTTATGTCTGTTAATGCGCGTAATAGTGTTAACCTTAATAGTAACACCTCTGCTCATCTGCTGGTTCTTGCAAAGTCTTAAAGCTCCTAAACAAGCACAATAACTTATTGCCGAGAAGTCTAGAACTACTTAGAGCTATAACAATTGTGTGAGGCCGTTAGGATGACCATCTTACTTGAAAACATATGGTTGCAAGATGTTCTATGCAAATTCTGCATCTAATTAAAAATGTTTATTACTCTTCCTTTACTGTGGCGCAGAAGCCACTAGGATTGATGTTGTATTTAATTGAAGTGATCGTTCATAAACAATTCCAATTATTTATGTTCCCCTTTCGATTCACTTTTTATATAGTTGACAAAAATCATCCTTTTCTGTTTTTTTGACTTATATATGTGCATCTCTAGAAAAAATCTATAATATATTGATTTTATCCTCATATAGAAAGTACTTTGTTTAGGTTCATTCTCCATTCAATAATATATGCACTTATTCTTGGCTTGCCAGATTGTGGAACACTCTCTTTGCTAACTTTGTATGTTTTCGCTGGTATTATAAAGTTATGGTTCAATATAGGATTTTATGTTTAAATAAAAGTTCTGATGATTTTTCTTTCTCGCACTACATAGGGTGATTATCTACGGAGGATTAGTCTGATAAAAGGCGATTTGGATGATTCGTATCCTCTGATGTTGAACAATTTTCTGCATATTCATCAGCAAGCTTCAACCTCTTCATTTTTCTTGCTCCATCAGAAGAATAAGCAGGGCCAAATTATCCAGGCAGAAGGAAATGTTCAGGGGACATCATCTAGCAGTAAGTTCTTGAAAATTTGAACACCAGTATGTTCTTTTTTTTTATGTTGCCTACATGATGTATTTTCTCCATAGTCTACACATGATTATAATCTTCTAGACAGGTTGATACATGAAAAATATATGAGAATAAAATTTGTAAATACACAACCCGATCCCATGTTTGAGTTAAAGCATTTTTCATGTTTTCATCCTTTACACATTGGTAATTTTGGTGCAAAATCGAGAATATTTGTTATTCTGGTGCAACACATGATTGATGTGTGAGCCTCACCTCCTTACTTTTTTCTTTAAAAAAAAAACGAAAAACTCAAAGCTACTAGGGCAATGTTTTATCATTTATGTAAAGTGTATTTAAGATAGCAATATCTCTGTGAATCTAGATTTAAGCCCACACAGAAATTGTAAATTTGTTGTGAGTTGTTTGTGTGGTTCTCCAAGATCATGTACCTACACTAAGAAGCATGTACTGAATCAATGTCAAAACTTGTTCACACTGAATTTAAGTAACTCAGTATCCAGTTCTAAACTGCAGGCCACAAGGAACCCTCCCATCCCCATGGAAAAGATAGGATCAGCGAACTCCCAAATGATCTGATCCACCACATAATGTCCTTCTTGTCGATGAAGGAGGCGGTGCGCACGAGTGTCCTGTCCCACTGGTGGGTCAACAAGTGGACTTGCTTGCAGTCAATAAAGCTTGATATAAATTGGTTTCGCCTAGATAGGGAAAAATTCCGTAGTTCTATTGACAAACTATTGCTAAGCCGCGACCATCTTGATGCTCCTATGGATACATTCCAGCTAGATTCTTTTGCAGTGGACCGGGCCAGTTCTTGGATCAACCATGCTATCAAGCACAACGCTAAAGTAGTTAAATTTTCTGAGTATCCAAGTTGGGAACCTTTTTACTTGGATCCAGAACTTGTGGAGTTCAGTTCTCGGTATCTAAAAACATTGGAGCTGACTAATGCAGCTCTAAATGAGATGGTATTTGATCGTCTCAATAACGCATGCCCGGTTTTGGAAAATCTGGTACTAAAAGAGTGTTTAATGGAGGTGCAACACATTTCTTCAAGTTCACTACAAAATTTGGATTTGATCGGTTGCTCTCTTCTCTATAATGTAAGCATCTGTACTCCGAGTTTGGTCTCGTTGTGCATCAAGGGTCAACAAACGGGCAGTTCTTCATTTACAAACTCTTACCTGACATTCACAACAATCACTCTCGTTGATGCTTCAGATGTCACAAGCATAGAGTTGACAGCTACTGATAGACAGGTATCACTAATCCCTTTTTGCAGACATTTTATTACTTCCATAAACATCATACAATTTTTATGTGACCATACTTACGTGAATGAAATTGCTATATTATTTAGAAAATAATATAGTGAGTATTTATTTCATAGCAAGGAAAGCATGAAACATTCATTTTGGATTATATGCATATACCATTTTGGCTTATCAAAAATGGTATATAGCACTTTGCCTTTTCAAAAAAATGTATATACCACTTTGCCTTTTCAAAAACATATGTATATACCACTTTGCGTTTTCAAAAAATTGTATGTACCACTTTTCCTTTTTAAAAAATGTATATACCACTTTTAACCTCGACACATATTTGTGTAGTGTTGTATATAATAATATAAACCGAGGAGGAGAAATAATCTCTTTATTATCACCGTTTTGCCACAAATTATTGGTATTCATAGCATACTTGTAATTTTTTGCTTTGCACATATGAAGTTTACGTTCATGGAACAGCAAGGAAGTAGGCAGATGTTTAGGAATCTCAGAACCTTGCGCTTGGGTGAATGGTGCATGGCCGATAATTTCTTGCCTCTACGCCAATATGTCAACCACTCACCTGTTTTGAGGAAGGTGTTTCTGAAGCTCAGTCTGGTCAGTACCATTGATTGCATGATCCATGTGCTATCAACTCTGGAAACTTGAAATCCTATTAACATTGTGAATCTTTCAACTTCAGGTGGATTGGTGGTCCGAACTCACGACCAATCAGTTGATGGCATTAGTCGAAATTAGCAGTGGAGGTTCCGTCAGTATTGACTTCTACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028575