Difference between revisions of "Os11g0166800"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os11g0166800| Description = RNA polymerase II transcription factor SIII subunit A family protein| Version = NM_001072368.1 GI:115484348 GeneID:43...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os11g0166800|
 
GeneName = Os11g0166800|

Revision as of 21:15, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os11g0166800

Description

RNA polymerase II transcription factor SIII subunit A family protein

Version

NM_001072368.1 GI:115484348 GeneID:4349871

Length

2378 bp

Definition

Oryza sativa Japonica Group Os11g0166800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:3216934..3219311

Sequence Coding Region

3217132..3217247,3217418..3217514,3217866..3218008,3218121..3218160,3218525..3218577
,3218701..3218774,3218893..3218975,3219099..3219167,3219268..3219309

Expression

GEO Profiles:Os11g0166800

Genome Context

<gbrowseImage1> name=NC_008404:3216934..3219311 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:3216934..3219311 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aagatcttggcaatcaaggacttcttggaggacgaagaccagtcggaggacgagctgctgagcttgctgcagagcctggcagacatggacatcacgtacaaggcgctccaggagactgacatcggacggcatgtgaatggtctgcgcaaacatccctccggtgaagtccggctacttgtcaagcagctcatcaggaagtggaaggagatagtggacgattgggtgcggttacacaattccagcggtgacgccagcaactcgatcatcaccgatggcaactccccggagaaaatccaaggcaagaaccagcaaagctctcaggtttcagagttcaagtattcccccagcccaagtaggcataacaactcaagctcagagagggttagcaatgggatcgcgtcgatagcagcgacaaaacatagagcaagccctgcgccagcgcatcataatgcaaggcagatcaacaacacccaccattctactacttcatcttctgctccagctaggatggtgaaggaacagaaggacagtcatcttgaccttgaaaggctggactctgcgaggaagagactccaggagaattaccaggaagcacaaaatgcaaaaaaacagaggacgattcaggtgatggacatcaatgaaattccgaagccgaaaaatagaaatgccttcatccgcaagggcaatgggggtgggttcccagcaaggcaccggtga</cdnaseq>

Protein Sequence

<aaseq>KILAIKDFLEDEDQSEDELLSLLQSLADMDITYKALQETDIGRH VNGLRKHPSGEVRLLVKQLIRKWKEIVDDWVRLHNSSGDASNSIITDGNSPEKIQGKN QQSSQVSEFKYSPSPSRHNNSSSERVSNGIASIAATKHRASPAPAHHNARQINNTHHS TTSSSAPARMVKEQKDSHLDLERLDSARKRLQENYQEAQNAKKQRTIQVMDINEIPKP KNRNAFIRKGNGGGFPARHR</aaseq>

Gene Sequence

<dnaseqindica>2065..2180#1798..1894#1304..1446#1152..1191#735..787#538..611#337..419#145..213#3..44#tcaagatcttggcaatcaaggacttcttggaggacgaagaccaggtcctcaaacaatccattttcttctctttttttttaattcgctcaaagaaaccgcagaaatctgacacgagctgcacgtttttggtttgcttcctcgcagtcggaggacgagctgctgagcttgctgcagagcctggcagacatggacatcacgtacaaggcgctccaggtgaaaacaaaagcttttttacccccatcttcttctttcaccttcactgctgttctcttctgttccccttgcaacaaaaggagatgagatgaagttagaagttcatgctttgtgcttgtccaggagactgacatcggacggcatgtgaatggtctgcgcaaacatccctccggtgaagtccggctacttgtcaagcagctcatcaggtgagtaagaagaagatgatgaacatggataaacactatagccaagtagtgttgttggaatatgcggtttaattgtccctttttttgggtgaattttggtgttggttgcaacttgaaggaagtggaaggagatagtggacgattgggtgcggttacacaattccagcggtgacgccagcaactcgatcatcagtatgtcgctgtgcaaaatatttgcatttgtcttcggctcatgtttctttctttttttcttcttttacaattcatgtttttgttaatcctgatgggttaaatcggttgctttgatgatggcagccgatggcaactccccggagaaaatccaaggcaagaaccagcaaagctctcaggtaaactgttcttgctaacaagtggctctgagcaactgcacaccacaatcttcttttagtgattccctttccccatagaaagtttccttttagtaacatgtcattgtgcccagaatattcccttctcaattatcccctgttggtttaccaaacaaatactactacatttcagagaaaaagaaagggggattgcacatgcttttctcatgctgattaaactaagagataatgcaaaaccagtaattattagttgtagtgacagcacagtttgtactttaatacatcctatatatacttttaacttctattttttggttcctaattgtgtgacaatgacacctcctctgctgatgcaacctttcaggtttcagagttcaagtattcccccagcccaagtaggcatagtgagtgtgacaaatacgctaccttccatggatttcttcagatttcactgttttgagtacccataattactgatttcttgtgacatgttccttttctttctctggattacagacaactcaagctcagagagggttagcaatgggatcgcgtcgatagcagcgacaaaacatagagcaagccctgcgccagcgcatcataatgcaaggcagatcaacaacacccaccattctactacttcatcttctgctccagctgtaaggatgcaaccagacctttctttccatttccccctaagtccctattgttgtcgggcagaggttgtgcactgcatttcgtttaaagtagaagtagcactatcagcatggaccccggatgtaggatcttttgactgattcgtctcacttgtcactactcattgtacaatggtgtctaatcatgcaacatgacaataaaggctccatgttccactttcagtgaacaaaagagtgactgttaccacaaagttggaagcttttttgaaatgttttattcgtgtgcagtgggtgagtgttgttgtcatagatagatgtgaatgtcagaatgattttggtggttttttcatgcagaggatggtgaaggaacagaaggacagtcatcttgaccttgaaaggctggactctgcgaggaagagactccaggagaattaccaggaagcacaaaatggtaaatttactaaaactttttgtacacctgcattataagcacactgcataacaagaatgtcaaatggttatatttgaaagcaatttgtcaggaatggtcctacaggaacagattgaaaacaaatgtaagtaggttaacatatttttatttgcggtttccatttttggcagcaaaaaaacagaggacgattcaggtgatggacatcaatgaaattccgaagccgaaaaatagaaatgccttcatccgcaagggcaatgggggtgggttcccagcaaggcaccggtgacattgcattttctgggaacccagatttcaaatttgtcttttacaagttgcactaagaagaaaaggagaaaaaaaagagaggtttcttttcttcatgtgctatgtattggctagcctcaacttcagtctgatatgttccatgtacatgagagggatgcttatggtttttgcaggagaaatagaagtttaaaatgttgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0166800, RefSeq:Os11g0166800