Difference between revisions of "Os11g0197600"

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(Created page with "{{JaponicaGene| GeneName = Os11g0197600| Description = Transcriptional factor B3 family protein| Version = NM_001073963.1 GI:115484574 GeneID:4349997| Length = 5225 bp| D...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os11g0197600|
 
GeneName = Os11g0197600|

Revision as of 21:16, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os11g0197600

Description

Transcriptional factor B3 family protein

Version

NM_001073963.1 GI:115484574 GeneID:4349997

Length

5225 bp

Definition

Oryza sativa Japonica Group Os11g0197600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:4877848..4883072

Sequence Coding Region

4878222..4878503,4878974..4879137,4879212..4879313,4879667..4880204,4882650..4882784

Expression

GEO Profiles:Os11g0197600

Genome Context

<gbrowseImage1> name=NC_008404:4877848..4883072 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:4877848..4883072 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggttagggaaaagcaaggtggccggatggggaaggggaaggggaaggggaaggagaaggagtgcgacattaactgcttcgggaggagcttcttccgtgtgcttctcaccctgcaatctctggagcggatgaaaatcccatcatcattcaaccaatgccttcagaatcaacctactgggatggtttctctggttgatcgaagtggaaataaatggagtgcagagctgacttcagactctgagggattcttctttgtgcatggatggaaagaatttgtcagagataactcaattcagtgtggtcaatttttagtattcacttatgataaacggtcacaattctcagtgacagtctttgaaccttcaggcattgacaagatatcaactttctctgctcacccttccaaaaatgtgatcattaaaacagaaagtgatgaagggggcatggtcaccgcagctatcacaacagagaaaatggctcccgccctgaaggaaaataatggaatcacaggaaagagaactagagatgtagattaccttatggaagatagggtggttgtatttaagaagtcatctgaggctaatgtttgcgaaagttctaggagaaaacgtgcaggagcttctgctggcaagtccaaggtaacatcgacaagccataacagtaccagaggttcatcatgcagctcagatgaagataattcttctagcaagtcaccaaatccaccattcctgatgcgctttctgtctggtgaggtgtctcggcgtggtagatgtgtttcaaagggtcaaagacaactaacagtaatatcacagaggcgtccggtaactgaagcagagaaggaccatgctcttcaaagggcaagagagtttaaatctaagaatccttttgccgtgcaaataatgatggagtcatatgtctatgttggatttttcatgaatatcccatgtgaatttgtccgtgagtgtcttccccataccaacaaaaggatcacactctgggatccacaagggaaggcttgggaagttaactatgtctactacagtgatcgttctgttggttctttcagtggtggctggggcaaatttgctgttggcaacaatctggagaagtttgatgtgtgtgtcttcgagcttgtccagaaggataacataaaagtgcacatctacagagttgtcccagaaattactccgcacaaactccgttctgacccgaagtaa</cdnaseq>

Protein Sequence

<aaseq>MVVREKQGGRMGKGKGKGKEKECDINCFGRSFFRVLLTLQSLER MKIPSSFNQCLQNQPTGMVSLVDRSGNKWSAELTSDSEGFFFVHGWKEFVRDNSIQCG QFLVFTYDKRSQFSVTVFEPSGIDKISTFSAHPSKNVIIKTESDEGGMVTAAITTEKM APALKENNGITGKRTRDVDYLMEDRVVVFKKSSEANVCESSRRKRAGASAGKSKVTST SHNSTRGSSCSSDEDNSSSKSPNPPFLMRFLSGEVSRRGRCVSKGQRQLTVISQRRPV TEAEKDHALQRAREFKSKNPFAVQIMMESYVYVGFFMNIPCEFVRECLPHTNKRITLW DPQGKAWEVNYVYYSDRSVGSFSGGWGKFAVGNNLEKFDVCVFELVQKDNIKVHIYRV VPEITPHKLRSDPK</aaseq>

Gene Sequence

<dnaseqindica>4570..4851#3936..4099#3760..3861#2869..3406#289..423#gcttgtttcctattttcctcttcccctcgcatcgcagcacagcggtaggcatttcgcttccattgcttctcctcctcctccgccgccgccgccgctgctgctcgtcttccctctcccgacccgccacccgcctcctcgccggtttgattttttttttctttttgttcacccggccgggcggggcgagcttgcgctctcttttcttccttcctttttcttggattctatttcggctttggttgttcggtcggggggggggggggggcgcaagaatcggagtaggaggtcatggtggttagggaaaagcaaggtggccggatggggaaggggaaggggaaggggaaggagaaggagtgcgacattaactgcttcgggaggagcttcttccgtgtgcttctcaccctgcaatctctggagcggatggtgatgtctctttaatcccttttttgtctctctttctccgtttgtgttgttgttgttgttgttgttgttcagtttgttatgaatggttgattgattagagggtagtaataatgttgtgttcacttgtgctacttttaatctgttcattagatgctgattgtgctagttgattgggatatgcatgtttggtttgtagccaatctcagccaaaccgaaaaaaaaaattgggactgacaaaatttttattatttgtttggtttatggccaaaaatttgccttgccaaattatttggctgagttgaatatgtcaagatgcaactttggtagcaaaccaaacaaacactagccaatttttgccaaaaaaaaatggcattgccattgcccaaaattggcaaggctagaaatggccatgaaccaaacataacctgcagtgtgtgtttcagcctcaaggtggctgtaggtagctgtatgtggattgtgttcgtgaagattaatgatttagtagtatgtgttttagccccatggtgacttttgattgcagggtagctacatgcattttttttccttttttgcaactccgatagatgtggattgtgttttcgtagattaataattaagtagtatgtgttttaaccccaaggtctcgcgtcctcaggtgatacccgtagaccggatgcactttttccctttttgtgaatcccacggatgcagattgtgttcgctagattaatgatttaggagtatgtgttttagccccaaggtggttgtgggtagctatatacattttttttccttttttgtgaatcccacggatgcggattgtgttcgctagattaatgatttaggagaatgtgttttagcccaaatctggttatttgattttagggtagctatatgcacctgtttcccttttttttttgaatcccacatatgtggattgtgtctgtgtagattaattatttaggaatgtgttctatccccaaggtggccgtgggtagctatatgtttttcctcctttttgtgaatcccacatatgtggattgcgttcgctagattaatgatttaggagtgtgtgttttagccccaaggtggttgtgggtagccgtagctatatgtattttttccctttttgtaaatcccacggatgcggattgtgttcgctagactaatgatttaggagtatgtgttttactccaaggtggttgttaggttgcaaggtagatatctgcacttttttccccttttttgaatcgcacagatgtggattgtgtccgtgtagattaattatttaggaatgtgttttatccccaaggtggctgtgggtagctaaatacttcccccccccccccctttgtgtgaatcccacggatatggattgtgttcgctagattaatgatttaggagtatgtgttttccccaaggcggttgtttggttgcagggtagctatatgcttgtcccccctttttgcgaatcccacggatgtggattgtgttcgctagattaattatttggaagtatgtgttttagtcgaaaggtggctgtatgattgcagggtaactataaacactttcaaataaatgtccgagtttttgtggtggttatgtatattccctagtgtgactagcttgctttgattcgttagtaaccttatacactttcattgttcacacgagcgtattaaagtattgattttgatatgtagctcttcatttgcactgcacagttggtttttcatagtcagcaaacaacatcttgattaaccttgtttggtggtggtatgtgttctcatagcgttctttagaaaaacatagagtaatcactcccactaccaaatccaggtttgtctaacactcaggtgtattggtcacacaatcagttattgttagaagttcatgacgactacatttactattttcgtggttttcccaaagtagctggctagctgccaaacttgcttagttcattttcacatttatgtggccaaagaatagtagaaagcactgtgttacaataaaattgcctatgatgtcctttcatttttcaactcagcggctaaaaacttacacaacatgggcctctgctaatgggttggattatctttcagagggtttgagtcttacttttcatttttattttttggtgtgggaaaagaaggaattcaattaatcaggataaggtttgatcttagttggtctaagcatttagtttttccagtcatacatcacgtatgttctgtaattttgcatttttgaggctatgatgtcaggactgctttgctggtctttacaatttgatgccttatagaaaaattacatgacgtggcatattgtatttgtctgatatatttgtttttgaactgacattgcatcgtatgagtagttcacaatgttaacaagtagtgtagaaaaataaattaacatattttatactttggtacaatgcagaaaatcccatcatcattcaaccaatgccttcagaatcaacctactgggatggtttctctggttgatcgaagtggaaataaatggagtgcagagctgacttcagactctgagggattcttctttgtgcatggatggaaagaatttgtcagagataactcaattcagtgtggtcaatttttagtattcacttatgataaacggtcacaattctcagtgacagtctttgaaccttcaggcattgacaagatatcaactttctctgctcacccttccaaaaatgtgatcattaaaacagaaagtgatgaagggggcatggtcaccgcagctatcacaacagagaaaatggctcccgccctgaaggaaaataatggaatcacaggaaagagaactagagatgtagattaccttatggaagatagggtggttgtatttaagaagtcatctgaggctaatgtttgcgaaagttctaggagaaaacgtgcaggagcttctgctggcaagtccaaggtaacatcgacaagccataacagtaccagaggtaaaacatttctatatttctgaaagtgttatacacatatttggcatagtcagcttagatgatgactattaatagtcaattattttgaactgttgggggaccagggaggtctgcataacggcacaaatgacttgccacatccatttcgtttatagaacttgtttagttgtattcctgatttgttccatgcatagccataagctacgcggtgccaaaccatgcaaagtaattgcaaaaagacatatttctaatctcttggttagaggttgcttatttatttatttccatcatacttgttcagaatcctaaggattcatatgatttcccaaaaaaattacttttgcacattataggttcatcatgcagctcagatgaagataattcttctagcaagtcaccaaatccaccattcctgatgcgctttctgtctggtgaggtgtctcggcgtggtagatgtaagttattgtcccctaaatgtagtgctaataaattacttctgtagacaatttgactgtgttgcacttttcaggtgtttcaaagggtcaaagacaactaacagtaatatcacagaggcgtccggtaactgaagcagagaaggaccatgctcttcaaagggcaagagagtttaaatctaagaatccttttgccgtgcaaataatgatggagtcatatgtctatgttggatttttcatggtaatgttacttccgtgtgttaatcctcatccagcactttccctttttctatgtgcatgagacattttatcttaaaaaaaatatgtgcatgagaggattctttcatgcatgattataatttgcacaatggcgctgctgctatagtttgagagttttggatgttctaatttgaacatcccatcttgacatagccttattacaaagtttctgcatacagcagagagcgatctataaataagcaacagtctgtagtagtaattttcaagcattcggttaataccatcataaatgagccaagtttagtatttttcaactatctttcttagataaacttccgatttccccaattatgccttaccctcggggcaatacattttttttacaaaaaggctcactatctgtatatgtttactcaacctccctacttgttttcttatatctaaaccaaaactcattttcttatattgcagaatatcccatgtgaatttgtccgtgagtgtcttccccataccaacaaaaggatcacactctgggatccacaagggaaggcttgggaagttaactatgtctactacagtgatcgttctgttggttctttcagtggtggctggggcaaatttgctgttggcaacaatctggagaagtttgatgtgtgtgtcttcgagcttgtccagaaggataacataaaagtgcacatctacagagttgtcccagaaattactccgcacaaactccgttctgacccgaagtaacattgctatgtcggcatgttggaggcttcaattccattgatctgaggctgtagttggcagttaaaaaactatttatatgttggtttctataaaaaaaaacaaaataagtgcctagttcataagtgaactattgttccggttgggttgttgaatgactagtttagacctggttgtattggttaaggagtgtactattgttgcggacgtgcagccattgtaatgctaaaatgtaacttgcatttttttttgtggctgtataatatttttactgttatgtttcatgatatatgtcataggtagttgatttcattcagattatcatcaaagtatactggcctgagatctgaaaaccagatggtgtgatatgcttcacc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0197600, RefSeq:Os11g0197600