Difference between revisions of "Os09g0326800"
(Created page with "{{JaponicaGene|
GeneName = Os09g0326800|
Description = Similar to PSMD2 subunit (Fragment)|
Version = NM_001069419.1 GI:115478580 GeneID:4346741|
Length = 8188 bp|
Defini...") |
|||
| Line 1: | Line 1: | ||
| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os09g0326800| | GeneName = Os09g0326800| | ||
Revision as of 20:57, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os09g0326800 |
|---|---|
| Description |
Similar to PSMD2 subunit (Fragment) |
| Version |
NM_001069419.1 GI:115478580 GeneID:4346741 |
| Length |
8188 bp |
| Definition |
Oryza sativa Japonica Group Os09g0326800, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 9:10186087..10194274 |
| Sequence Coding Region |
10186218..10186328,10186411..10186511,10187089..10187209,10187295..10187354,10187584..10187651 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008402:10186087..10194274 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008402:10186087..10194274 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgccgccgcgcaaggaccccaacgggggcgccttcccctcggagcccgccccgccgcagccggccaaggccaaggggaagaagaaggatgagaacaaggacgacgacctgtcggaggaggaccaggcgctcaaggagcagctcgagctctacgtggtgcgggcgcaggaccccgatcccggcgtccagaagctcgccctcgagagcatgaggcaggagatccgttctgcgacaagttcaatgacctctgtcccaaagcctctcaaattccttcgcccgcactatggaattctcaaggcttactttgagacaatgccagaatctgagctgaagaagtatatggctgatatcttgtcagtattggccctgacaatgtccgctgaaggagaaagagagagcctcaagtaccgaatgataggctctgaaggtgacattggttcatggggtcatgaatatgtgagaaacttggctggtgaaattgcacaggaattccagaagcgccaggatgatggcatgacaactgattccctgaaggaactggtggagcaaattgtttcattccacatgaagcataatgctgaacctgaagctgtggatctcctaatggaggtcgaaaagcttgatttgctagttaagcacgttgactccacaaactacaaaaggacctgcttgtacctcactagttcttctaaatatcttcctgctcctgatgacatgtcggcacttaaaatagcttttgagatttacatgaaatttggagattttgcaaatgctttgcgtattgcacttctgcttgatgacaagtctctggagttgaagcagatttttacagcaactgatgattttcacctgaagaagcaattcgcgtttatcatagcacgccatggtttaagcaccgacattgatgatgacatagctgcagatgaaaatgagaaggaggctttgcaggacataatttctaatattaaattgagtgaggggtaccttacacttgcacgagatattgaggtcatggagccaaaatctccagaagacatatataaggttcatttgattgatggccgaggggctacaagctccagtcttgattctgcaagacagaatctggcggcaacatttgtcaatgcattcgtgaatgctggatttggccaggataaactcatgaccgcaccatcagattcttcgggcagtggttcttctggaaactggttattcaagaacaaggaacatgggaaagctagtgcagccgctagtctgggaatgattcttctgtgggattctgattcaggacttgcccaacttgataagtacctgcacagtaatgatattcatgttgttgctggggctttgctaggtattggaattgtttcttgtggtgtgaagagtgactgcgatccggcatttgctcttatttctgagtatttcagcagggatgagtcaattatacgaattggagcaatccttggtcttggtattgcttatgctggctcccagaaagaggaggttagagagaatcttacagcttttctgagtgactcccaagtacctctggaggtcttagtcttcgctgccatctccttaggtttggtgttcgttggttcttgtaatgaagagattgcacagacaatcatatgtgtcttaatggagcatagtgagccagagcttgcagagccaattatacgcttgcttcctgttgcccttggccttctatatcttggaaagcaggaaagtgtggaggcgaccgctgaggtttctaaaacctttgatgagaagataaggaattattgtgacgtgacactgatgtcgctggcatatgctgggacagggaacgtgcttaaggttcaaaaactccttggaatctgttccgagcatcttgagaaaggtgaaacccaccaaggaccagcagttcttggaatctccctaatttccatggctgaagaattaggggcggaaatggctgtacgttcccttgaacgtcttttacagtatggcgagcagaatattagaagggcggttcctctagctctgggcttgctttgcatatccaatccaaaggtaaatgttatggacacaatgagcagactgagccatgatgcagatgcggaagtttctatggctgcaataatctccctgggcttgataggggctggtacaaacaatgcccgaatagctgggatgcttcggaacctctcaagttattattacaaagaagcaggacatctgttttgtgtgaggattgctcaaggtcttgttcaccttgggaagggtttgctgaccctttcgccatatcactctgaccggttccttctgtcccccatagcacttgctggtcttgtgacggttctgcatgcctgccttgacatgaaatccatcattctggggaagtaccattacatgctttatatccttgccctagctatgcagcctcggatgctattgactgtggatgaggatctcaagcccctctctgttccggtttgtgttggtcaagcagttgacgtcgtcggtcaggcgggtcgacccaagacaattactggattccagacgcattcaacgcctgtattacttgccgcaggggaacgagcagagctggcaactgaaaaatatcttccactgacaccagttcttgagggttttgtgatcctaagaaataacccagagtatcatgaagattaa</cdnaseq> |
| Protein Sequence |
<aaseq>MPPRKDPNGGAFPSEPAPPQPAKAKGKKKDENKDDDLSEEDQAL KEQLELYVVRAQDPDPGVQKLALESMRQEIRSATSSMTSVPKPLKFLRPHYGILKAYF ETMPESELKKYMADILSVLALTMSAEGERESLKYRMIGSEGDIGSWGHEYVRNLAGEI AQEFQKRQDDGMTTDSLKELVEQIVSFHMKHNAEPEAVDLLMEVEKLDLLVKHVDSTN YKRTCLYLTSSSKYLPAPDDMSALKIAFEIYMKFGDFANALRIALLLDDKSLELKQIF TATDDFHLKKQFAFIIARHGLSTDIDDDIAADENEKEALQDIISNIKLSEGYLTLARD IEVMEPKSPEDIYKVHLIDGRGATSSSLDSARQNLAATFVNAFVNAGFGQDKLMTAPS DSSGSGSSGNWLFKNKEHGKASAAASLGMILLWDSDSGLAQLDKYLHSNDIHVVAGAL LGIGIVSCGVKSDCDPAFALISEYFSRDESIIRIGAILGLGIAYAGSQKEEVRENLTA FLSDSQVPLEVLVFAAISLGLVFVGSCNEEIAQTIICVLMEHSEPELAEPIIRLLPVA LGLLYLGKQESVEATAEVSKTFDEKIRNYCDVTLMSLAYAGTGNVLKVQKLLGICSEH LEKGETHQGPAVLGISLISMAEELGAEMAVRSLERLLQYGEQNIRRAVPLALGLLCIS NPKVNVMDTMSRLSHDADAEVSMAAIISLGLIGAGTNNARIAGMLRNLSSYYYKEAGH LFCVRIAQGLVHLGKGLLTLSPYHSDRFLLSPIALAGLVTVLHACLDMKSIILGKYHY MLYILALAMQPRMLLTVDEDLKPLSVPVCVGQAVDVVGQAGRPKTITGFQTHSTPVLL AAGERAELATEKYLPLTPVLEGFVILRNNPEYHED</aaseq> |
| Gene Sequence |
<dnaseqindica>132..242#325..425#1003..1123#1209..1268#1498..1565#2100..2142#2628..2693#2848..2886#3003..3085#3188..3299#3378..3458#3608..3766#3873..3980#4046..4150#4241..4381#4483..4587#4681..4902#6093..6206#6306..6521#6849..6908#6989..7102#7211..7296#7380..7488#7575..7753#7833..7905#aagcacacaagaaaggatcccaacgggccgcgccgcgctcctctcgctccctcgcctccgcggagctcgattcctaaaccctacctcgccgcgccccgccgccgccgcgggccggggagatcgccctcgccatgccgccgcgcaaggaccccaacgggggcgccttcccctcggagcccgccccgccgcagccggccaaggccaaggggaagaagaaggatgagaacaaggacgacgacctggtgagctagccaccccccgattcgccgtctccttcccccccaactctctctctctctcacggatttctttgcgtggttgcagtcggaggaggaccaggcgctcaaggagcagctcgagctctacgtggtgcgggcgcaggaccccgatcccggcgtccagaagctcgccctcgagagcatgaggtaacgaggaggattttctgatggtgtgtaactgtataattctgatagttcgtgatgacttatgttttagtgtgatctggtttgggtggatgcatttatcacactacttatggtttggatgagagaggagctagccaattgaggatgatcatgtcatctagtagactataagactaattaactcataggtattttggttgcactgcttacttgtcctgtgcaagagttcgttgttctgcaaacttactgtcgtgagaatttaaaatgcgcataaattcggcccaagctattggtttggcggcacattgttggaggcttgtttatccttttgcccttaaatcttgggtacaatactacgtaatcacaattaccatgaggtcatgctttaactgttcaatttctccaatctctactgcatcatggtgagattgttttatctgctcagctggaatctcgcatcctagtggctactgctgctattggtggcatcactttgcattattcaaccagttagtgcatacacagttttcacatttgtcttattgatctcttgttaatggtgatttatgcttaacaggcaggagatccgttctgcgacaagttcaatgacctctgtcccaaagcctctcaaattccttcgcccgcactatggaattctcaaggcttactttgagacaatgccagaatctgagctgaaggtatcaaccaatcttcgatctctaggttgagtcatggttcaaatactacttgatgcttatatggtattcttcaattattttgcagaagtatatggctgatatcttgtcagtattggccctgacaatgtccgctgaaggagaaagagtatgtgaaaatgccattctgatgtcttttccttgtgtcaatttcctagtgtttttttttaatttgcttgtatgctaacttctgagaatgatttacttctgtaaatagtcatacattttttgtgtgtgttttaaatgatagacatatagagtttaactttttctcactgttaactgtacaatatcaatccttcaagaattggctaatatgctttctttttttgtttcaggagagcctcaagtaccgaatgataggctctgaaggtgacattggttcatggggtcatgaatatgtgaggtaacatcaattgccaggcctcctaaattttttagcactcacttttattcacgagacagttacttcttgtgaatcttaatggtaaacatttattcctgagatagtttatgatgaactaccaaacagtaccttcatatcctgtttgacaacttgatgtttttccctgttatgtttgaagttgaatccttaggcttatttagaatttatggtacggtcaaatatttaactgttatcagtgtattaaataatattgaatcgtaactcaggaaattatagataagaagttattcttttcaggttttcaagtgcatgcttatttgattagttgatttaatcattaatcaaaagaaatgattggttagtaatgctgcggatttaggttgtatctggaaataactttggagttttcagtttttctgtttcctttgtttgttattgagaataaggttgttgctgttggaaacttggaatacatatgtttgtctttcgaatctagattggattttctaacaatgtcaatgtctcacttgctagaaacttggctggtgaaattgcacaggaattccagaagcgccaggttggacccttatccatatcatcatatgaattgcataatatttcttcaccccaaagaaagaaatattttaacttttgttttaatccctaacaaaactttaattccattagcaataggtcttaaagccacaagataagatcacccttgtttatattatctaaatgactatattctttagtttaacatccattgtctagtctagctgctgttgattttaataacaagtgtttttaagtgatcttccctcagacctttttgatttttgtaccccacatctatattgtactgattgatgtatacaccattgttatttggcaagaattgagatagcttgattgctttctttttttttggttcagttagaagccccacacatgttttcttctgtcaattatgttatcacatgtgtatggactaagacagtgaaaagtttaggtgtgtggacctcatttttatcatcctaactttgtttttgcactttgcaggatgatggcatgacaactgattccctgaaggaactggtggagcaaattgtttcattccacatgaaggtcaattttgagtagagtccatgggtgtcattttttaaaaaaatttcattgcaaatgtcttgttacacttggtgtaatgcattaaatattagcaaataaactactagtgctcgatcaatggatggactgatactgattatcatttatattgcagcataatgctgaacctgaagctgtggatctcctaatggaggtatgtgaaacttctatttttaaacgtataaaaaaatgttcctttgtttgcattaagagttctcattatttgttcattggttcacaactgatgtgtgatatcaaattacttcataggtcgaaaagcttgatttgctagttaagcacgttgactccacaaactacaaaaggacctgcttgtacctcactagttcttctaagtatgccactgaaattgatctcacttgattaaagcttagtattctctagttttactgaattgaactttcttcactcttttgtgttgggatgcaaacttgcagatatcttcctgctcctgatgacatgtcggcacttaaaatagcttttgagatttacatgaaatttggagattttgcaaatgctttgcgtattgcacttctgcttgatgacaaggtgggtgaatgaatgttatcattcctgtttgctgtccagtacataatgacactgacaaagatttcattgatttgttagtctctggagttgaagcagatttttacagcaactgatgattttcacctgaagaagcaattcgcgtttatcatagcacgccatgtgagcctcatcccatgcacataaacatgcaacagaagcaaattttctattgtgttcttgtctacaattcagtattattggtagtctgcattgttcacatttcctctttgcttatgtgttcaatggtttctttttttcctttgctgaagggtttaagcaccgacattgatgatgacatagctgcagatgaaaatgagaaggaggctttgcaggacataatttctaatattaaattgagtgaggggtaccttacacttgcacgagatattgaggtcatggagccaaaatctccagaagacatatataaggttaacttgtttccccgaaatgctgtctgctgattgcatgtatctacttatttatttgtttatgaacttgctattaatgattaaaaaatgcatgctaatttgttaggttcatttgattgatggccgaggggctacaagctccagtcttgattctgcaagacagaatctggcggcaacatttgtcaatgcattcgtgaatgctggatttggccaggttagttatgcgaatttcatcaaaggtttccagggcaagcaaagttctcaatgttcttgttgcaggataaactcatgaccgcaccatcagattcttcgggcagtggttcttctggaaactggttattcaagaacaaggaacatgggaaagctagtgcagccgctagtctggtaatgcaatgcaacagcttggtttatttccttatacatggcatttaggttattaggtgatcatagtgatgataaaacaatctttttcagggaatgattcttctgtgggattctgattcaggacttgcccaacttgataagtacctgcacagtaatgatattcatgttgttgctggggctttgctaggtattggaattgtttcttgtggtgtgaagagtgactgcgatccggtatgtccatattctaaaacttctaatgcgcaagtctctgtacatcttctaaaacttctaatgcgcaagactctgtactgatgttgtgacatcttttccaggcatttgctcttatttctgagtatttcagcagggatgagtcaattatacgaattggagcaatccttggtcttggtattgcttatgctggctcccagaaagaggaggtcaaaatccttgctcttggccttgctatcccactggttaaaaactattaaccatgtgttattttgtgttaacatggtttccaaacatttcaggttagagagaatcttacagcttttctgagtgactcccaagtacctctggaggtcttagtcttcgctgccatctccttaggtttggtgttcgttggttcttgtaatgaagagattgcacagacaatcatatgtgtcttaatggagcatagtgagccagagcttgcagagccaattatacgcttgcttcctgttgcccttggccttctatatcttggaaagcaggtaatttgactgtatacttattcatactcccaaattctacatttatgtttttattgaggtcaaggaccatatagtacatatgaacacattaactatacaatactgcctttgtactgctctgtacattgtttcatgattatgtctcacaaccagtctcttgttgattcctttgttttcccataatgagtttgataatcttttgatgctattaagcgataatagttaccagttttatgtatgcttatccttgtgcattttgtctattataatcgttgatcttaactgctcgcggtccacaaacttgtaagatgggtgcagtttagtacaatgagttgtaaaatgctcaaatcagtgcaatgacttgtgtgtgtgtgaaccaagggtgagaatagtccacattttggttaatcaaatcatttgagtgctgactaggatgccataccagcaagcatgtaaatgcgtataaggcatgtgagtgaacagtaacatgccctcccggaacttgcttctttcctgctagaggctaccttctctttgaatattttttacatgacgcatggggcccactcatgcagtgtggcacaaatagtgcaaccagggcaccgagttgtgagatgaaagatttgtgcagtgagggagatcaatcaggataaagaaactggaatttcgttttttctgggtggaggcacgggatgtccgcaatgatgacagctcaaggatgagataacgattatccaaagacaaggcacacaacctcatatgtatggtgactcattctaccatcattatcaggaatgtcaggcaccgctatcaatcttctgcagatttccctagcaagataatttccaaaaggcataggagaactatccctatcttttctggatcacaagattcatgcatgcattcagcagcataacgctccgattcgctaacatggactattttggccttgttcgcacgcaccatgcaagtagttgaactggctcaaatgttttttagttgtgctgaattgcacctaccatgtaggttcatgcatccaaagtacaattttactctttcggtaattgctatattctctggattaagcactgtcagctgtcttgcaaatgtaacatgcaacctacaccgtctgtttttagccatttttctgtttatatactattatactcattcttgagtactgttctcaggaaagtgtggaggcgaccgctgaggtttctaaaacctttgatgagaagataaggaattattgtgacgtgacactgatgtcgctggcatatgctgggacagggaacgtgcttaaggtgattcccaatcaacagaagaattgtgcatggattataggattacaatattttttagtgcctatttgtttttgacgaatctttccgtttgatttgcaggttcaaaaactccttggaatctgttccgagcatcttgagaaaggtgaaacccaccaaggaccagcagttcttggaatctccctaatttccatggctgaagaattaggggcggaaatggctgtacgttcccttgaacgtcttttacagtatggcgagcagaatattagaagggcggttcctctagctctgggcttgctttgcatatccaatccaaaggtatggtacatgatttgttatttttgtagtaacgtcaaatgtttgttatctttgtgccgttgcacacaatcattcaatatatagaattgctgataaagaattattcgataccatgccatgacagttagttttgcactctgctacatcatcaatttcaattcactactcttgagaatgtgctttgtcacacgactactatttgatcctggttattcgaggaaaagtagcatatttctagttaaaattagtagattgtatcatttggctagataaatatctcatatagttttctgatgtctacatttctaccacttgcctgtcaattaggtaaatgttatggacacaatgagcagactgagccatgatgcagatgcggaagtttctatggttagtaacctcactaacaaaacctaccatattaagttctatgagcattgatatttattcaatcaaattggtacatgcaggctgcaataatctccctgggcttgataggggctggtacaaacaatgcccgaatagctgggatgcttcggaacctctcaagttattattacaaagaagcaggacatctgttttgtgtaagttcaaatctaaaataaacattttttatctttgttttgccaattattctgatctcatgctgttgtattcaagtttcatatcagtttttttcatttgactttcaggtgaggattgctcaaggtcttgttcaccttgggaagggtttgctgaccctttcgccatatcactctgaccggttccttctgtccccgtgagtaacttgcaaagttgttgaatctccttcaatcttattggaaccacattttctaagagagtccattcttcacttttcagcatagcacttgctggtcttgtgacggttctgcatgcctgccttgacatgaaatccatcattctggggaagtaccattacatgctttatatccttgccctagctatgcaggtatatatctcgttcaaagatcttggtagtggacatattagctaaaccagtcacatggattctcagttttttctctactgaaacagcctcggatgctattgactgtggatgaggatctcaagcccctctctgttccggtttgtgttggtcaagcagttgacgtcgtcggtcaggcgggtcgacccaagacaattactggattccagacgcattcaacgcctgtattacttgccgcaggggaacgagcagagctggcaactgaaaagtaaactaaaacatctggagaacaattttcaaatttgtcagttgatctttgcttatgcttatgttctttctatatgcagatatcttccactgacaccagttcttgagggttttgtgatcctaagaaataacccagagtatcatgaagattaagggatagatatggcacacgcaaaatgcaggaagggcctggagtattaggaagaggcttggatcaatatctaattgtcacacaaagcaatgaacaaatagcacgatgaagacaatgcatacttgatacggtgaggactgagttgtaacaaagagttcaggtataatggggccaatatgacaggagaactttgtaagaattaggaatagaatctgtgggtgtaatggcatggccgaaaatgtttttgactataccagaatgaaaatgacccaagagtttgttgcc</dnaseqindica> |
| External Link(s) |
