Difference between revisions of "BGIOSGA000828"

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(Created page with "{{IndicaGene| GeneName = BGIOSGA000828| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000828, complete gene.| tag = P0481E1...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA000828|
 
GeneName = BGIOSGA000828|

Revision as of 18:06, 20 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA000828

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000828, complete gene.

LocusTag

P0481E12.28-2

Ensembl Transcript ID

BGIOSGA000828-TA

Ensembl Protein ID

BGIOSGA000828-PA

Length

3172

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34516715..34519886

Sequence Coding Region

34519791..34519886,34519432..34519506,34519243..34519338,34518965..34519050,34518726..34518846
,34518067..34518146,34517916..34517978,34517708..34517826,34517498..34517583
,34517249..34517370,34516940..34517051,34516715..34516819

Genome Context

<gbrowseImage1> name=IndicaChromosome01:34516715..34519886 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:34516715..34519886 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCACATCGCCGCCTGCGAGGGGCAAGCCGAGGTCGTCGAGCTGCTCCTCCAGCGTGGGGCGGATGCCGTCGCCGAGGACCAGTGGGGCAGCACGCCTTTGGCAGACGCATTGCATTACCAGAACCATGATGTGATCAAGATCTTGGAAAAGCATGGCTCCAAGCTTAAGATTGCTCCTATGCATGTTAAAAATGTCCGTGAGGTTCCTGAGTACGAGATTTCCCCGAACGAGCTAGATTTCACTAATGGAAATGGTATATCGAAGGGTACATTTAGGAAAGCAACATGGAGGGGCATTCTGGTTGCTGTTAAGAAGCTTGATGACGATCTAATTATGGACGAGAACAAAGTACAAGCATTCAGAGATGAGCTTGATGTGCTACAACTAATACGGCATCCGAATGTCGTGCAATTTTTAGGTGCTGTAACACAAAGCAGCCCAATGATGATTGTAATGGAATTTATGCCCAAGGGTGATTTGCGCAAGCACTTGAGTAGGAAAGGGGCTCTGGAACCGTCATATGCAGTGAAATTAGCTCTTGATATTGCAAGAGGGATGAATTATTTACATGAGCATAAACCTCAAGCTATCATCCACCGTGACCTTGAGCCTTCAAACATATTGAGGGATGACACTGGACATCTGAAGGTGGCAGATTTCGATCTGTGTAAGATGCTAAAATGGAGAAGAAAAGTTAGAGAAGAGAAAGCTGTAACTTCTCCAGGCAATGCATGTAGGTATGTAGCTCCAGAAGTCCTGCGAAATGAAGAATATGATACTAAAGTGGATGTCTTCTCATTTGCTTTGATACTTCAAGAGATGATTGAAGGATGTCTCCCTTTTTATGACAAGAAAAATAATGAAATTGAGAAGGCACATAATTCTAAAGAAAGGCCACCTTTCAGAGCTCCTCCAAAGCATTATGCTTACGGATTGAGAGAGTTGATTGAACAATGCTGGAGTGAAAATCCTGCTAGCAGGCCTGACTTTAGAACGATCATTGAACAATTGTCTTATATCCAGAATGAAATATCTCAGAGAAACCGTTGGAAGGTGAAACCTCTCAAATGCTTCCTGAGCTTTGAGGGCATGTGGAAGAAAGATCGAAATGAGGGCAGCACCACTCGTTCATCACGTTCATCGAGATCCTATTTTTAA</cdnaseq>

Protein Sequence

<aaseq>MHIAACEGQAEVVELLLQRGADAVAEDQWGSTPLADALHYQNHDVIKILEKHGSKLKIAPMHVKNVREVPEYEISPNELDFTNGNGISKGTFRKATWRGILVAVKKLDDDLIMDENKVQAFRDELDVLQLIRHPNVVQFLGAVTQSSPMMIVMEFMPKGDLRKHLSRKGALEPSYAVKLALDIARGMNYLHEHKPQAIIHRDLEPSNILRDDTGHLKVADFDLCKMLKWRRKVREEKAVTSPGNACRYVAPEVLRNEEYDTKVDVFSFALILQEMIEGCLPFYDKKNNEIEKAHNSKERPPFRAPPKHYAYGLRELIEQCWSENPASRPDFRTIIEQLSYIQNEISQRNRWKVKPLKCFLSFEGMWKKDRNEGSTTRSSRSSRSYF</aaseq>

Gene Sequence

<dnaseqindica>1..96#381..455#549..644#837..922#1041..1161#1741..1820#1909..1971#2061..2179#2304..2389#2517..2638#2836..2947#3068..3172#ATGCACATCGCCGCCTGCGAGGGGCAAGCCGAGGTCGTCGAGCTGCTCCTCCAGCGTGGGGCGGATGCCGTCGCCGAGGACCAGTGGGGCAGCACGGTGAGCCTCCCTGAACTTTGTTTTGTTTTGCTGCTATTGGTGATTTTATTGCTCTAGCTGAAAAACCTCATGATTACTCGGGGATAATCTGAGTTGAATTGGGAACTCCCATGGAATGGTATTAGATGCAAGTTTTATCCAGTAAGTACAATGATTGATTGACGCGAACATGGTCTTAGTCACCGAGGGAGATGGATTCGAGATAATACTTCTAATATATATGTTTATTTCTAGGTTGCTATTTTAATATGCGAGTGTTGTATCATTTGTCTACCATCTGGCAGCCTTTGGCAGACGCATTGCATTACCAGAACCATGATGTGATCAAGATCTTGGAAAAGCATGGCTCCAAGCTTAAGGTACTTCCGAACTATTATGTACGGGCATTTTGTCTTCCTGATGTACTGCTATGTTCAAGTTTTCTGAATTTATTTCCTTTTTTTTTTTTGAAGATTGCTCCTATGCATGTTAAAAATGTCCGTGAGGTTCCTGAGTACGAGATTTCCCCGAACGAGCTAGATTTCACTAATGGAAATGGTATATCGAAGGTGTGTATATATGAATATGTTAGCCTTTCTTTCTTATTTGAAATTTTCAGTTAGAGACACAATCTGCCAGTCACAATGTTTCTAATTTGTTGACTTGCTGACCCCTACTTTCTGTACATAATTTTAAATATGTTAGGTTGCTCCATCAATTTTCGTCAATTATGTTTTATATCATTTTCATCTGTTTCTCAGGGTACATTTAGGAAAGCAACATGGAGGGGCATTCTGGTTGCTGTTAAGAAGCTTGATGACGATCTAATTATGGACGAGAACAAAGTGTGGGTTGGTTCCATTGAGTAGTATTCAGTTACTGTTTTACTCGTCTTTTTTCACTTAATTGTAGACTCCGTCTGAAAAATGTAGTTCCCTGACAGATTAGATTGGTTTGCATTGCAGACAAGCATTCAGAGATGAGCTTGATGTGCTACAACTAATACGGCATCCGAATGTCGTGCAATTTTTAGGTGCTGTAACACAAAGCAGCCCAATGATGATTGTAATGGAATTTATGCCCAAGGTTTGTCCTATAGGCAGCGCTTTTTTAAATTTGCATTATTCACATATCTGATCATCTTTAGATCTGAGACCTATTTGATAAACTGCAATAGGAGCTGCTGCTTTAGATGAACTTTTCTAGTTACCTGGTCATTCATAGTTCTGAGTGATAAAATGTTGTTGCCATTCTCAAGTGGCAATGCCAGATCTGTTTTTCCTTGTCTTAGCTGTTGCTTTTCTTTTGTTGGAAATATTTGGCCAACTGGTAATGCCAATTTAGCCTTCACTCTTTCCTTCTAGCTGCTAATATTTGGTTGCAAGCACAATAGATCAGTGCAAGCTGGATATATGTGTACCGAGCTTAACTTTGCTGTTTTGGTCCACCAAAATATGTTCATAGACTAGATGGACTTTTCCCTAACTACTTTCTGTTTCTAGCTTTTTTAGAAGGTGAGCCCCACTACAAAGACAGATCACTAGCTTTGTTAACTTCCTATTAGTATTCTGTTAATGTCAAATGGTTCATGACTATGCATGCACTTGAGTATGAAAACACCTTTTTTTAGTGAACTGATGAGAACTTTGGAATTTTTGTTCTCAGGGTGATTTGCGCAAGCACTTGAGTAGGAAAGGGGCTCTGGAACCGTCATATGCAGTGAAATTAGCTCTTGATATTGCAAGGTTCGCCTATCATGACCTGAATCTCTTGGTTCTACTTTTTTGTTGCTATAATGAAGACTGATTTGCAGTTCTCTCTGAAATCTAATAGAGGGATGAATTATTTACATGAGCATAAACCTCAAGCTATCATCCACCGTGACCTTGAGCCTTCGTGAGTACTACTTTTATTTTATTTCTAGACCAGATGCTTTGAATACATGATTTGTAAAGGCTTCTTCTATCCATTGTGTAAGACAACAGAAACATATTGAGGGATGACACTGGACATCTGAAGGTGGCAGATTTCGATCTGTGTAAGATGCTAAAATGGAGAAGAAAAGTTAGAGAAGAGAAAGCTGTAACTTCTCCAGGCAATGCATGTAAGAAAATTCATACTGAATTTGAGCTATATATTAGTATCCATCTTACTGTTCCAAAATATCATCACTTACATTTGTTTACCTTCTTTCTGCACTGATAATTGGCATGACAAATATGTTGCAGGTAGGTATGTAGCTCCAGAAGTCCTGCGAAATGAAGAATATGATACTAAAGTGGATGTCTTCTCATTTGCTTTGATACTTCAAGAGGTAAAAGTGTTGCTATGCAACATTCTGTATTCCTGTGCCACTATGAACTGTAAAGTAAAACTGCTGAACCTACTCCCAGAGCCCCCTAGAAGACCAGTTTTTGTACTGATATTCCAAACATTTTCAGATGATTGAAGGATGTCTCCCTTTTTATGACAAGAAAAATAATGAAATTGAGAAGGCACATAATTCTAAAGAAAGGCCACCTTTCAGAGCTCCTCCAAAGCATTATGCTTACGGATTGAGAGAGTAAGCATTCCTTCTTTTGTTTTGCCTGTGGTAACTACTAAATTGTTTGGAGCACTATTATGACATATTTTCCATTGCAATCTTCTTGCGTACAAGCTTCCGCAATCTGTGTTCCATTTGCCTATCTGGAACTTTGAACTTTTATGTGCCACTATTTCACCCTGAACTGACCACTTTTCTGCTGCACACTATGATAGGTTGATTGAACAATGCTGGAGTGAAAATCCTGCTAGCAGGCCTGACTTTAGAACGATCATTGAACAATTGTCTTATATCCAGAATGAAATATCTCAGAGAAACCGTTGGAAGGTAGCGGCTAATGTCTTTCCTGCTGTATTGCAATGGTCTTCTGAACATTCTGTCATAGTAATAGAGAAATTGTTCAAGTAACAGATTGATTTACTTTGGCTGTGCCCTTGTCTTGAACAGGTGAAACCTCTCAAATGCTTCCTGAGCTTTGAGGGCATGTGGAAGAAAGATCGAAATGAGGGCAGCACCACTCGTTCATCACGTTCATCGAGATCCTATTTTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000828