Difference between revisions of "Os11g0298400"

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(Created page with "{{JaponicaGene| GeneName = Os11g0298400| Description = Ribulose bisphosphate carboxylase, small chain family protein| Version = NM_001074260.1 GI:115485168 GeneID:4350322| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os11g0298400|
 
GeneName = Os11g0298400|

Revision as of 21:18, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os11g0298400

Description

Ribulose bisphosphate carboxylase, small chain family protein

Version

NM_001074260.1 GI:115485168 GeneID:4350322

Length

10245 bp

Definition

Oryza sativa Japonica Group Os11g0298400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:11057563..11067807

Sequence Coding Region

11057751..11057832,11057957..11058042,11059534..11059611,11059721..11059852,11060139..11060189
,11060283..11060423,11060508..11060630,11060743..11060820,11061202..11061291
,11061374..11061493,11061690..11061773,11062403..11062498,11062589..11062777
,11063459..11063534,11064261..11064364,11064462..11064721,11065754..11065840
,11065938..11066165,11067018..11067094,11067166..11067231,11067306..11067415

Expression

GEO Profiles:Os11g0298400

Genome Context

<gbrowseImage1> name=NC_008404:11057563..11067807 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:11057563..11067807 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggaggcgcgcgcgcgcaggtgaacaagccgcacaagacacgcttcgcctccaaggcgtcgcgccacgcgcacaagatcgataaggtcaggaccgggaagccggagggcagccaccgcgccgccgtcaagggggcccgcgccgcgcgcgtccagcggagcaaggcgatccgtgatcagaaacgtgctgctttgctgaaggagaagcgctcttccgttggatcttcgagtgcgccccgtgtcgttgttctttttggcctttcctcgtcggcaaatgtcagatcacttgccaaagaccttttaaccattgcttctggtgatgaagagaaaccaacttcttccactgttgcttctcctacatataaacttcgaaccacggtacttgaagcaccttatggtgatcttacatcatgcatggaactggcaaaggttgctgatttgctagcatttgtactatcagcaaattcattatacgattgtgattcgagcagtccaattgatgattttggatcacaatgcttgtctgtttttcgggccatgggcttacctagtacagctgttttcattcgagatcttccatcagaaaacaaaagtaggcaggaattgaagaaaacagctatttcttttgtttctccagagctacctgaggattgcaagttctatgcagctgacacaaaggatgatttgcacaagttcatgtggcttttcaaggagcagcacctttcatgtccacattggagaaaccagaggccttatgttatgtctgaggaggcctgcataaaacctgatgacagttcagggctgtgcacattgcttatgtctggatatttacgtgcccacaatctttctgtcaaccagcttgtccatctgtcaggtgttggtgattttcagttgggtcaaattgatatcctcaaggatccttttcctattaatgagaggaaaaactccaatgccatggtttctgaagatagtggtattcagattgttgacacctttgttccagacccttcaagtcaagagcctttgcttgttgaaaacaccccagatccacttgaaggggagcagacttggccgacagaagctgagatggaagaagcctatttgaacaacaaacagagaaagctaaaaagaaagcttcctcgaggcacttcagaataccaggctgcttggattgtggatgatacagatgatgaagatggtgattctgagaacgacaaccaggatggtgctggaatggttatagatgagcaagatcactcagacaatggaggtgatggttcagatatggatgtggtatctcactttacggagaaatttgatgaagaaacaattgggggtaccgagatggcagacgatgaaaatttgaccaaagagcagatagaggcagagattaagaaaataaaagaagctaacgctgaagacgaagaatttcccgatgaggtggagacacccttagatgtcccagcaaaaaggcgatttgcaaaatacagagggctaaagtcatttaggacatcatcctgggatccaaaggaatcactgccacaggattatgcaagaatatttgcattcgataactttacaagaacacaaaagcatgttcttgctaaaatggcagagcgagatgaaggaaccttgaaggattgtgctcaaagaggatcatttgtgaggctccatctgaaaaatgttcctactgagattgcctcaaaacttgttcatccatcaaggagattgcctgtggttgtttctggtcttcttcaacatgagtcaaaaatatcggttctccatttcagcataaagaaacatgactcctatgaagctcctatcaaatcaaaggactccttaattttcaatgttgggttccggcagtttactgctaggccattgttttcaactgacaacatcaattgcaataagcataagatggagaggtttctacatcatgggcggttttctgttgcctctgtatatgctccaatttgctttcctccactccctcttattgttctaaagagcagagatggggagcagcctgccattgctgctgttggttcactgaaaagtgtggatccggaccggattattcttaagaaaattgttttgactggttatcctcaacgggtctcaaaactgaaagcagtagtgcgatacatgttctacaatcctgaagatgtcaagtggtttaagcctgtagagttgtggacgaaacatggtcgacgtggccgaatcaaggagactgttggcactcatggtgctatgaaatgcatattcaatagcagcgtccagcagcatgataccgtgtgcatgagcctttacaaacgcgcttaccccaaatggccagaacagctctaccagatatga</cdnaseq>

Protein Sequence

<aaseq>MGGARAQVNKPHKTRFASKASRHAHKIDKVRTGKPEGSHRAAVK GARAARVQRSKAIRDQKRAALLKEKRSSVGSSSAPRVVVLFGLSSSANVRSLAKDLLT IASGDEEKPTSSTVASPTYKLRTTVLEAPYGDLTSCMELAKVADLLAFVLSANSLYDC DSSSPIDDFGSQCLSVFRAMGLPSTAVFIRDLPSENKSRQELKKTAISFVSPELPEDC KFYAADTKDDLHKFMWLFKEQHLSCPHWRNQRPYVMSEEACIKPDDSSGLCTLLMSGY LRAHNLSVNQLVHLSGVGDFQLGQIDILKDPFPINERKNSNAMVSEDSGIQIVDTFVP DPSSQEPLLVENTPDPLEGEQTWPTEAEMEEAYLNNKQRKLKRKLPRGTSEYQAAWIV DDTDDEDGDSENDNQDGAGMVIDEQDHSDNGGDGSDMDVVSHFTEKFDEETIGGTEMA DDENLTKEQIEAEIKKIKEANAEDEEFPDEVETPLDVPAKRRFAKYRGLKSFRTSSWD PKESLPQDYARIFAFDNFTRTQKHVLAKMAERDEGTLKDCAQRGSFVRLHLKNVPTEI ASKLVHPSRRLPVVVSGLLQHESKISVLHFSIKKHDSYEAPIKSKDSLIFNVGFRQFT ARPLFSTDNINCNKHKMERFLHHGRFSVASVYAPICFPPLPLIVLKSRDGEQPAIAAV GSLKSVDPDRIILKKIVLTGYPQRVSKLKAVVRYMFYNPEDVKWFKPVELWTKHGRRG RIKETVGTHGAMKCIFNSSVQQHDTVCMSLYKRAYPKWPEQLYQI</aaseq>

Gene Sequence

<dnaseqindica>189..270#395..480#1972..2049#2159..2290#2577..2627#2721..2861#2946..3068#3181..3258#3640..3729#3812..3931#4128..4211#4841..4936#5027..5215#5897..5972#6699..6802#6900..7159#8192..8278#8376..8603#9456..9532#9604..9669#9744..9853#gttcgcgcccacttccagccaggccaccgccgccgccgccgaccgaagcagccgacggcgaccaccgccgcggcgagggatcggtgcgtaagcttggcggcgggccgctccgcacgcgggagggagcgccgtagccgcccttccccccaccctctacaccccctcgccggcggcgaacacggcgcgcgatgggaggcgcgcgcgcgcaggtgaacaagccgcacaagacacgcttcgcctccaaggcgtcgcgccacgcgcacaagatcggtacggcgcccatggcggtctccccttctccttctcctcgtcctcctcccgcccccggcaatcccattcctcttcttcgttgccttacgctgatggatggcggcgtctttttgttgttcggcagataaggtcaggaccgggaagccggagggcagccaccgcgccgccgtcaagggggcccgcgccgcgcgcgtccagcggagcaaggcggtgaggcttcagctctcgcagtgcatcgcacctttacttttgtgcttggttattagctagagtatgtgcttgactgattgtgacttttgggtagatgtcaaagctggctaattccgattcgggtggctgtatggagctatttttttttcttctgatgtttattttgtgaagcacaaagcatattgataagaccagcagccaattaatacaaatgtttattaaaattgttaagtactccaagaaataagacatgtttccaataaatcaataataatacctgcgacatgatagggaacacatctgacagccagtatactcagtctcagagtgaatggcaattaatctttgacagtgcagactaaaatgatatctgaaaaatagatggctagtggaccgtccaaacttcagcttacacagctgaacttcaaccttcagcttgtacagcttatagcattcccataaaattttagaagaccaacagtgcacctgtgtgttgcatctgaagttgattttcattatactggagtgtaacaacatataaacttttctaacaagaaatgagcttttgctattttagttcttgtgttatgataggtggacaagggacatggatatcttcattacaacacgaactcaagtagtttacaaagtaaaaacaggaatttgtacttttttttttgcttatcctggttcactgtcctcagtgttgttagttgtaaggtccttcagcatgttcaaccattcatctactgaagcattgttgactgttgggtagcaagcctcataggctggtgtcagaggccaatggtgcaaacatctactttaacagcatcttgattatttgtgaagatagaaacatgataattttccagaactagactgacacaagacaggaagtggcctgcaacgcaaggagggatccagcaaggctgggctttttgtatgatcagtgatgtatcctaatgtttattttgaacaaaactatcacttccttctttatgttagatggcagattgatctctgcatattctctattcatccagattcttggaaaatttgttattacagtaatagtttgctagatgcagagatcttgaaagtgtttcttctggttggcttgaagaaaccattgttttgtactattttttttattattatggtaaattcattcaacatatagttagttattctttctgtatttctttgattcatctcctttcatgctagacagtaaagtggaaagtattgcaaattgccgtgcagccactatgttcctttgtcctagttatgatggctccaaagcatgtcttccaactgtcatccaatttatttgttctttaattcattttctctgttttgatctctgctcaacttggattacatatactgatatggtcgctgagcattatgttttggtttgttaagagctcttgttttttctagcctcatcagttttttcttgtttactgtaatggttttgcttggttgcagatccgtgatcagaaacgtgctgctttgctgaaggagaagcgctcttccgttggatcttcgagtgcgccccgtgtcgttgttagtatttatgaacttagctcttgttgtcctactttgattgtcacttttgttgtttcctacggtcagatgatagacatttccttggggtaactgatgattattgcaggttctttttggcctttcctcgtcggcaaatgtcagatcacttgccaaagaccttttaaccattgcttctggtgatgaagagaaaccaacttcttccactgttgcttctcctacatataaacttcgaaccacggttagtttaatttaaatacagttgtaccacacatacctgtaggcaggacacactatttagtaatatctctattttcacgttcaccaaaaaattatgaccattgtatcatctctctgatgtgcatgtgttgaactatagataggtctttgaaccattgtatcagcacttggtctcatgttttagttgttctttatatatattgctgttaatttcttaatttccattcattgaatctgcacacgacatgaatgataacattgcttttatattcatatggttcttgaaggtacttgaagcaccttatggtgatcttacatcatgcatggaactggcaaaggttcattcaatcaaaatcaatttgtcataattgtttttgttgaaatttcttgcctctaatctggatcttgcaaactatatctttcctacataggttgctgatttgctagcatttgtactatcagcaaattcattatacgattgtgattcgagcagtccaattgatgattttggatcacaatgcttgtctgtttttcgggccatgggcttacctagtacagctgttttcattcgagtaagttcccatcataagcatttgtcatgccagacattgtataattgttatcaacttccatcttttaacattggtacttgtcaggatcttccatcagaaaacaaaagtaggcaggaattgaagaaaacagctatttcttttgtttctccagagctacctgaggattgcaagttctatgcagctgacacaaaggatgatttgcacaaggttttctttggaaccatatattattaaataatgaaatgatatttatatttttcttcaccttttctatccttccaatgctgtaatgtaattatttatgcttaaatcttttcagttcatgtggcttttcaaggagcagcacctttcatgtccacattggagaaaccagaggccttatgttatgtctgaggaggtttgaatgatttgatactctatctctcttttttgagtgttgacagctgtatcttggtgtagaatatttggcccaaaatcacatccatgtttcccattttgaaaatttgtctgtgcagtatgcttgacaattaagactggttctgctaaaattaaaataatatgtgaacttttcctaggtgtgttaaatctttgacaaggcatatgcgagattgtgagcacatgcatcacatcaccttaggtttccatgtaatgatatattaagttggctttgaacctacattattcagtgctagtggtgattattcacaagttacaagtcatgttggctttgccttttctttcagtttaaaactgattgacataagatgtttgttttcaggcctgcataaaacctgatgacagttcagggctgtgcacattgcttatgtctggatatttacgtgcccacaatctttctgtcaaccagcttgtaggtgatctatgtttttatttctagtgagctattttatgattttctgttcctattttctaacacctttgccactcaaaaggtccatctgtcaggtgttggtgattttcagttgggtcaaattgatatcctcaaggatccttttcctattaatgagaggaaaaactccaatgccatggtttctgaagatagtggtattcaggttgttatacatcataaattcacttttacaaactgaattatactgttcacaactacattagaatgatctgatgcaagtaatgctatttagtatcataataagcataataatcaatgactaagttatcttttacatgttcagtttcatttattttgataacaccttttaaacttctcattatttggccctttttcagattgttgacacctttgttccagacccttcaagtcaagagcctttgcttgttgaaaacaccccagatccacttgaaggggagcaggtgatctttctcccatttggcttaatgatgtgatgttgacaagccattgttttgagttctgtcgtatcaaaaccttttggtattgaagggaaaatacaaggggtctatctattacttcatatagtcctactcttagaaagttggatttagtgcacagtttctataatagcacattgacttttaaaaagtttcatcattgttactgtgaagcatcttagtgttggtttgacaaaaaaaaatgttggtaatattcttgatgtcacgacttactatttttattttcaatgtgttgtcatctgttgttctgtgttattttcttctcttagatgaagtcagaagtttgtttgcttttaacatactcattaagctctgtatctttcttaaaaatacaacatatgtcatcagatagaatagactcgcttagcttaatggaaacctttgctgtcaatctgtttcttttggctcagattgcattcattatttgtcatattttactgaaccaaacattatgtttcctatgtttgtttcatcctatcaaatcttatttgctctcttgtgaattagtgaaattaaattatatcaatatatctatatttgagaataagttctcttttgtattattatcttagacttggccgacagaagctgagatggaagaagcctatttgaacaacaaacagagaaagctaaaaagaaagcttcctcgaggcacttcagaataccaggttcacaatgcttatcaagattatattacctattgcttactttttttaataattacttattgaaaaattctcctcaaatgctattgtcaggctgcttggattgtggatgatacagatgatgaagatggtgattctgagaacgacaaccaggatggtgctggaatggttatagatgagcaagatcactcagacaatggaggtgatggttcagatatggatgtggtatctcactttacggagaaatttgatgaagaaacaattgggggtaccgagatggcagtgagttcccttattccttcaatctgatacattataaagcatttgctttcaaagaacttattagtgggcaaaacagagaaattatagctgcagtctatcatttttatattttgatttttcttgccctagtgtgtagttgtactagttaaaagacacctaaatgactgctattatgcataaaaagaatcatgtacatttccattttgttgggaactgaacatgttcattaatgtttttgctatagggaaaactgaacacttacaatgttttcacatctaatactagtaacttagctttctatactacataacattggcaattcattcatcttggaccttcccacactatatattcggattcactaaggctaacttggaatttataaaaaaaatgtggaaaaagtgttctgcaatgaaggtgtttcaggagtagtacacaaaaatgcaatgtagagtgaggcgtcagattgacaacaatcaccaccactgccttctcttagagtagtgagatagcagatatgccttttgtgcaatgtttataaattcgtagggcatgcttttttatccaatgtcgaattcttcttctctttctgtataatctggttttcttcttctagcatgagatgaatatgcatgctttaatctgtctcaactttaagtaaggtccattgtacattggcaggacgatgaaaatttgaccaaagagcagatagaggcagagattaagaaaataaaagaagctaacgctgaagacgaaggtatgggtgccaataatcacggatgtaactcgtccaaaaagtgcaatatattgaaatacaacctgttcctgatttttttcttaattcttaattgctggctgttgccagtatttcctgtaaataatggtgaaatcctgataacacatgccatggaatcttggtaccttttgagtttcatgttttatcaattctgcaaaaacatgccatggaatcttggtggtagccttttgagtttcatgttttatcaattctgcaaaatgacattgatgtcatcatagctactagaaattttattgtttcacttcagtaatcttttatagaaatacacataccttgtttttaaatttcattacaatatgcattctttgatgtaacacttcacacattgttgatttcctctaactgcacagaaaccttatatgtggggggctaacctctagctgacttctgtgacccacctgtcagtggaaaaattagtggttttagtaagtgtgctgagtatttgttatggttttgacaagtatctgtagtttttttaaactttactgagaagaacgtaaatgcaaactatttatttatggaatataccttacaaattagaaatgctcaaatgcttcattttctaatcaatagctattcagtggacatattatgattttactatagggtacatttgcattatttgattttcaaagaatcatattcaattgtcatttaatgtttcagaatttcccgatgaggtggagacacccttagatgtcccagcaaaaaggcgatttgcaaaatacagagggctaaagtcatttaggacatcatcctgggatccaaaggtaagtgtgattgaattatctttagctgctgcagtttgaccttatgaatttcacgtgtcatttattatggttctttttcttcattttgtttctgtaggaatcactgccacaggattatgcaagaatatttgcattcgataactttacaagaacacaaaagcatgttcttgctaaaatggcagagcgagatgaaggaaccttgaaggattgtgctcaaagaggatcatttgtgaggctccatctgaaaaatgttcctactgagattgcctcaaaacttgttcatccatcaaggagattgcctgtggttgtttctggtcttcttcaacatgagtcaaaaatatcggttctccatttcaggtattcacctacccattgcactcaacaaattcgtgtgatctagttttaggctgtggtgtcatttccactactaaattgtgatgtactcctccgtcccaaaatatagtaacctagtactagattagacatggacccgccaagattcatagtattaggatatatctaatccagtcctaggttgctatattttgggacggatggagtagttgatgatatttggccaacttttagcatgtgttgtttctttactgtatatcagtaataagatttcttatgctctgtgattcatgccaaattggcaatcattgagagctgcatttcctttctcatccctggtagatcatatatggactataggtggagggtgaagaacctgagactgcatgagattaatcttcaatacttaattccaaaagactagccgaaaatctcttatgggcttgcacttaacaatccaatctgatagataataatcattctaatcaaatcctatgtctaaggaaacctccttccccaaatctggccatggtcttgtgtgccttaggcaccaccttggctgtctatgccccttccttggcctcagtggacctcggcctttggcccaattcccattacaataggctgacattattttggtgcagttcaatgcagatacatttgacggtgttgccacccagaatggtacaaaattagttttcttttctaaaaaaagaatttttcatgccgtggtattccaaaccatgacatcagcaaagtctgtaaaatgcatctgtaatcagtaattttaaaatctatttttatatatttgtagaaccgacacaactgttatgcatgaaagcagttttcaagagttgtgcatcttatttttatttgtccattattccaatctatatctatatttaaaagtgtattgatgctcaaagttctgaaagatgacttgactatgtccagagtatttcttttttttgactaaaaggagtaataatataatgctatcatgtgatcattcattacatttcctttttgctgcagcataaagaaacatgactcctatgaagctcctatcaaatcaaaggactccttaattttcaatgttgggttccggcagtttactgctaggtaggtagtggaagctcagtcatgctaatgcagaaaaaacagatgctcgtcttttcattgagaaatgtctcattggttatttatgaatctatcacaggccattgttttcaactgacaacatcaattgcaataagcataagatggagaggtttctacatcatgggcggttttctgttgcctctgtatatgctccaatttgctttcctccactccctcttattgttctaaagagcagagatggggagcagcctgccattgctgctgttggttcactgaaaagtgtggatccggaccggattattcttaagaaaattgttttgactgggtaagtttcgaattatcctttaataggcaaacagttctgcaattttcattttgcctttttggtccaataaatttatgttgatgtgctctatcgatattttctaggaaataattactgttggtggataaaaatttcttataataatgttcacacaatctatcttgttatttggaagaaaatatgacaatactgtttgcatcgaaaaagttatgtataacatccaatcacagtcttcaaataggtgctataacatcccatcatgtatagtcttcaaaagttgtttcgttattcgaaggaataatataatactgttcgcaacaaaatgtttgttgtcttacagctgtttgccagttgtttgtgttggtgaattaatgaaaagagagaacttaggattgaggacaagtgcttgtgctctgtaaggtggtatttgttgttctgacttggcagatttgccaaagtgggggagtggggatttctacaacaatttgtgccagtttgatttctcttttttcttgttctgacagagattatataatatctaggaaaacaaaatatcaactactcaggatttccaatcaaaatctgtacaaatttagctattgatatttatgatgaacatacaaaaatcattggtgtagatttgtcttgaaaaattcttttgcaatattatgattttagaatgttctatatttatatgtaattgaagttagttctcaaagttgtgttatgaagataatgttgatgcttaaagtgtcgattgtttgagtgttattctactacattatttgagaaagaggaaaagattagtcctttcttatgccggtcatgtttctgacttcacatctcatgcagttatcctcaacgggtctcaaaactgaaagcagtagtgcgatacatgttctacaatcctgaagatgtcaagtggtttaaggcaagtgttttacagctaattcatacactgctccatatatattcaacgtcaataacaccattgttttgcagcctgtagagttgtggacgaaacatggtcgacgtggccgaatcaaggagactgttggcactcatggtacgtttgctagacccatttcgacatgtctgatacatcgctgatccttcactcaccgtgctcttgcttaacaggtgctatgaaatgcatattcaatagcagcgtccagcagcatgataccgtgtgcatgagcctttacaaacgcgcttaccccaaatggccagaacagctctaccagatatgatcatatcagggtcatggatatgtgcttgcacgttggcatgtacgtctcaaagttttgacagattgagctcatcgatgtgcttcctgatgcagctcatatatgtatactagtgctagcagaaaaagaaacctcatgtcaacaacgacatgtagttagctgtattctgtatgttaacatttgttttacgttaacagctatgatttttgatttttgctgattttcggcgtgctttcatccgcatttgtgattgattgagccggtaattcaagctgcaatgttacaagatatcgtgttaaatgttacaggtgcaatcaggagctcacctgtaatccatgcccatgggtggtggttaaagagaaaccttatatggcataatatgttaaattgcttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0298400, RefSeq:Os11g0298400