Difference between revisions of "BGIOSGA001860"
(Created page with "{{IndicaGene|
GeneName = BGIOSGA001860|
Description = Retotransposon sine subfamily|
Definition = Oryza sativa Indica Group BGIOSGA001860, complete gene.|
tag = P0469E05.2...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{IndicaGene| | {{IndicaGene| | ||
GeneName = BGIOSGA001860| | GeneName = BGIOSGA001860| | ||
Revision as of 18:13, 20 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
BGIOSGA001860 |
|---|---|
| Description |
Retotransposon sine subfamily |
| Definition |
Oryza sativa Indica Group BGIOSGA001860, complete gene. |
| LocusTag |
P0469E05.27 |
| Ensembl Transcript ID |
BGIOSGA001860-TA |
| Ensembl Protein ID |
BGIOSGA001860-PA |
| Length |
2583 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:11494241..11496823 |
| Sequence Coding Region |
11496494..11496823,11496322..11496382,11496125..11496219,11495935..11496047,11495566..11495839 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome01:11494241..11496823 source=RiceIndica01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome01:11494241..11496823 source=RiceIndica01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGGGACGGAACCATCTTTGCCTGGTCACTTGCTTGTGGATTCTGTCATGCGCAGTTCTGCTTCATGCTTCTCCTGATGGATTGCTGAGAATTAGCCTGAATAAGAAGAGATTGGACAAGAAGACCTTGGACGGTGCAAAATTGGCAAGGGAGGAAAGCCATCGTCTGAGAGCCGACGGTTTAGGTGATGACATAGTTCCTTTGGACAACTACCTGGACACGCAGTACTTTGGAGAGATCGGCATCGGCACTCCACCACAGAACTTCACTGTGATATTCGACACTGGAAGCTCCAACTTGTGGGTTCCATCAGTGAAATGTTATTTTTCGATAGCATGCTACTTACACCACAGGTACAAGTCAAAAGGGTCGAGCAGTTACAAAAAGAATGGAGAATCTTGCAGCATTTCCTATGGGTCTGGATCAATTGCTGGTTTCTTCAGTGAGGATAGCGTGCTAGTTGGGGATCTTGCTGTGAAAAATCAGATGTTCATTGAGACAACCAGGGAACCGAGCCTTACTTTCATCATCGGGAAGTTTGATGGAATTCTTGGACTTGGATTTCCGGAGATCTCTGTGGGAGGAGCCCCTCCAATTTGGCAGGGAATGAAAGAGCAGCAACTGATCGAGAAGGATGTATTTTCCTTCTGGCTCAACCGCGATCCTGATGCACCGACAGGGGGTGAGTTAATCTTTGGTGGTGTAGACCCAAATCATTACAAGGGGAGCCATACATATGTTCCTGTTACCCGCAAAGGCTACTGGCAGTTTGAGATGGGGGATCTTCTTATTGATGACTACTCAACTGGGTTCTGTTCTGGTGGTTGCGCCGCTATTGCGGATTCAGGGACTTCATTGCTCGGTGGCCCAACAACTATTGTTGCTCAAATTAATCACGCAATTGGAGCTGAGGGAATTGTTAGTATGGAATGCAAACAAGTTGTGCGGGACTACGGGGACATGATCCTCGAGATGCTCATAGCACAGGCAAGCCCCATGAAACTGTGCTCTCAGATTGGTCTCTGTGCATTTGATGGTACTCGTTCTGTCAGAAACAATATAGAGTCTGTTGTTGATAAAGAAAAGGTGGGCTCAGATCTTTCCTGCACTGCTTGCGAGATGGCTGTTGTCTGGATACAGAATCAGCTCCGACATAACCAAACAAGGGAGCTCATTTTGCAATATGCTGACCAGCTCTGCGAGCGTCTCCCAAGCCCCAATGGCGAATCGGCAGTCGACTGCGATGAGATCTCAAACATGCCGAACCTTTCATTCACCATAGCAAACAAGACCTTCACCTTGACACCAGAGCAGTACGTAGTGAAGCTGGAGCAGCAAGGTCAAACTGTTTGCATCAGCGGGTTCATGGCGTTCGACGTGCCACCTCCACGCGGCCCACTCTGGATTCTTGGAGACGTGTTCATGGGTGCATACCACACTGTCTTCGACTTTGGCAAAAACAGGATTGGGTTCGCCGAGTCTGCTTGA</cdnaseq> |
| Protein Sequence |
<aaseq>MGRNHLCLVTCLWILSCAVLLHASPDGLLRISLNKKRLDKKTLDGAKLAREESHRLRADGLGDDIVPLDNYLDTQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSVKCYFSIACYLHHRYKSKGSSSYKKNGESCSISYGSGSIAGFFSEDSVLVGDLAVKNQMFIETTREPSLTFIIGKFDGILGLGFPEISVGGAPPIWQGMKEQQLIEKDVFSFWLNRDPDAPTGGELIFGGVDPNHYKGSHTYVPVTRKGYWQFEMGDLLIDDYSTGFCSGGCAAIADSGTSLLGGPTTIVAQINHAIGAEGIVSMECKQVVRDYGDMILEMLIAQASPMKLCSQIGLCAFDGTRSVRNNIESVVDKEKVGSDLSCTACEMAVVWIQNQLRHNQTRELILQYADQLCERLPSPNGESAVDCDEISNMPNLSFTIANKTFTLTPEQYVVKLEQQGQTVCISGFMAFDVPPPRGPLWILGDVFMGAYHTVFDFGKNRIGFAESA</aaseq> |
| Gene Sequence |
<dnaseqindica>1..330#442..502#605..699#777..889#985..1258#1463..1576#1686..1750#1857..1998#2086..2205#2295..2383#2499..2583#ATGGGACGGAACCATCTTTGCCTGGTCACTTGCTTGTGGATTCTGTCATGCGCAGTTCTGCTTCATGCTTCTCCTGATGGATTGCTGAGAATTAGCCTGAATAAGAAGAGATTGGACAAGAAGACCTTGGACGGTGCAAAATTGGCAAGGGAGGAAAGCCATCGTCTGAGAGCCGACGGTTTAGGTGATGACATAGTTCCTTTGGACAACTACCTGGACACGCAGTACTTTGGAGAGATCGGCATCGGCACTCCACCACAGAACTTCACTGTGATATTCGACACTGGAAGCTCCAACTTGTGGGTTCCATCAGTGAAATGTTATTTTTCGGTAGGTTCATCACCTAACAGACTTATGAAACTATTGTGCACGTATACAGTAGAAAATGACTGTATTTTTGTAAGGAAGAATGTTTGATGTTTTGATGTCTATGCTTTCCAGATAGCATGCTACTTACACCACAGGTACAAGTCAAAAGGGTCGAGCAGTTACAAAAAGAATGGTATGATAGATCCAGTGGCATCTCAATATTGTAGATCCTTTTGGCAAGTAAAACCAATGTCTATTAAGACCCTTATACTGTTATTGGGATTTTTATTTTCAGGAGAATCTTGCAGCATTTCCTATGGGTCTGGATCAATTGCTGGTTTCTTCAGTGAGGATAGCGTGCTAGTTGGGGATCTTGCTGTGAAAAATCAGGTGACTTATCGCACTATTGTCTCGGTAAAACATTTAGATGCATCATTGTTGATGCTGCAGGTCCATTTTTCTTTCAGATGTTCATTGAGACAACCAGGGAACCGAGCCTTACTTTCATCATCGGGAAGTTTGATGGAATTCTTGGACTTGGATTTCCGGAGATCTCTGTGGGAGGAGCCCCTCCAATTTGGTACCTACTCAGACCATTTTATAAATTGTGATTATGTCACTACCTAAGTGATGATTATGTTTTAACACTGTTCTATGTGATATGGGGAAAAACAGGCAGGGAATGAAAGAGCAGCAACTGATCGAGAAGGATGTATTTTCCTTCTGGCTCAACCGCGATCCTGATGCACCGACAGGGGGTGAGTTAATCTTTGGTGGTGTAGACCCAAATCATTACAAGGGGAGCCATACATATGTTCCTGTTACCCGCAAAGGCTACTGGCAGTTTGAGATGGGGGATCTTCTTATTGATGACTACTCAACTGGGTTCTGTTCTGGTGGTTGCGCCGCTATTGCGGATTCAGGGACTTCATTGCTCGGTGGCCCAACAGTATGAAACCTTCAATCTCTAACTAATGTTATGGTCCTTTAGTGTGGTACTAGAAGTTAACACAAATTAACACACAAAAAAAGTGGTACTTTGCAGTTTCTCATCTAGGAACGTAAAATACATCCTGATTGATGGAATGTGCATTTGAAAAATGTTTTGCAATCACAGTACAGCTTACATATTTGCCTTTTCTACTGCTGTCAGACTATTGTTGCTCAAATTAATCACGCAATTGGAGCTGAGGGAATTGTTAGTATGGAATGCAAACAAGTTGTGCGGGACTACGGGGACATGATCCTCGAGATGCTCATAGCACAGGTTTGCCACTTGTCTGAACATTGGATTGAATTTTTCTTGTGATGCTTCATTTTTTTTCATTGATCTTGGATTCTCTGACCAAATATAAAATAATTTTGTGACTGGGCAGGCAAGCCCCATGAAACTGTGCTCTCAGATTGGTCTCTGTGCATTTGATGGTACTCGTTCTGTCAGGTCAGCACAACACATACATGACATTTTAATTGCCATCTTAATATATCTATGTTCCTCCTTTTTGTTCCCTTTCCATGACAGACTTGTTTCACGAATGTATATGTAGAAACAATATAGAGTCTGTTGTTGATAAAGAAAAGGTGGGCTCAGATCTTTCCTGCACTGCTTGCGAGATGGCTGTTGTCTGGATACAGAATCAGCTCCGACATAACCAAACAAGGGAGCTCATTTTGCAATATGCTGACCAGGTAAGTAGTGATCATTACGTCCTTTGCTATGTCGCACCAGCCTTTCCTGATTGCAAAGCATAACATTCCAATCCCAATTTACCGAAGCTCTGCGAGCGTCTCCCAAGCCCCAATGGCGAATCGGCAGTCGACTGCGATGAGATCTCAAACATGCCGAACCTTTCATTCACCATAGCAAACAAGACCTTCACCTTGACACCAGAGCAGGTGGCTCCCTCAGTGACACACTTGGCCCATCCTCTTAAGCTATACTCATGCTTTTCTAAATCTCACCGTCGTCTTCTTCAACTATGCAGTACGTAGTGAAGCTGGAGCAGCAAGGTCAAACTGTTTGCATCAGCGGGTTCATGGCGTTCGACGTGCCACCTCCACGCGGCCCACTCTGGTACACAAATTACACTGTCATCAAGAAGCGGGAGCTCCATGTTGTTAGGTTCTTTGACCGTTTGACGTTTAGCTTCTCGTTATCTGACCCATCTTGTTGCATTGCGTTTTTGCAGGATTCTTGGAGACGTGTTCATGGGTGCATACCACACTGTCTTCGACTTTGGCAAAAACAGGATTGGGTTCGCCGAGTCTGCTTGA</dnaseqindica> |
| External Link(s) |
