Difference between revisions of "Os09g0332360"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os09g0332360| Description = ABC transporter related domain containing protein| Version = NM_001188853.1 GI:297726836 GeneID:9266280| Length = 87...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0332360|
 
GeneName = Os09g0332360|

Revision as of 20:57, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0332360

Description

ABC transporter related domain containing protein

Version

NM_001188853.1 GI:297726836 GeneID:9266280

Length

8724 bp

Definition

Oryza sativa Japonica Group Os09g0332360, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:10510804..10519527

Sequence Coding Region

10510804..10511061,10511608..10511656,10512657..10512790,10513092..10513382,10513481..10513813
,10513933..10514075,10514169..10514285,10514386..10514542,10514616..10514719
,10515294..10515396,10515512..10515793,10515889..10516211,10516312..10516348
,10516671..10516724,10516854..10516930,10517011..10517106,10517306..10517384
,10518851..10518971,10519366..10519421,10519495..10519527

Expression

GEO Profiles:Os09g0332360

Genome Context

<gbrowseImage1> name=NC_008402:10510804..10519527 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:10510804..10519527 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctttatgtcatagttgtagagctcaacaagaagagaggtgaagtcaacaaaaatagcatcgatcctagtcacaaagtgcttcacagggttggtattaaactgccgacaattgaggtgaggtacaagaacctgaatgtagaagcagagtcatatgttggcagcaggggccttcccaccattctcaatacctatgccaacatattgaagaatgaccttgctattaggttctcctggctctggaaaaacatcactgttgttggccttggctggaacactcccatcaacccttatgttagccaacatgatctgcatatggctgaactgacagttcgtgagacaatcaatttctctgcaaagtgtcaaggagttggccatcactatgatctgtttctagaactattgagaagagaagaggaagaaaacattacaccagatcctgaaactgatatatatttgaaggcagctacaacaggagaggagaaagctgagatagttacaaatcacatactaaagattttgcggttggatatatgcgccgacacaattgtagcccctaatgttgattctgcagctgagatgcttgtcacactaggacgagctcttttcatggacgagatatcaaatggacttgatagctcaacaacattccagatagtgaacaccatccaacaaaccattcatgttcttggtggaacagctgtcattgctttgctacagcctgcacccgagacatatgaattatttgatgatataattctcctctcagatggtcaagttgtctatagtggccctcgtgatcatgtgcttgagttctttaaatcgttgggattcaaatgcctagaaagaataggtgtagctgacttcttgcaagaagttacatcaaggaaagatcagaaacaatactggatacatggcgatgacacatatcgatatattcctgttacagtgattgccgaggcatttcagtgtttccatgtcggccaggcaataagaagtgagttggcaatcccatttgataacagcaagagccatattgcagcgctgaaaacatcaaagcatggtgtcaacttgaaaaaaatacttaaagctaacattgacagagagatattgctgttgaaaagaaaatcatttctatatatattcaatgcacttcagttaacactagtggcgataattgcaatgagtgtctttatccatacaaatatgcatcatgactcgatagaaaacgggaggatgtacatgggagtgcagttctttgatgaagttaaaaaatggctgatatgggagtactggacatcacccctgatgtatgcactaaatgccttagcagtaaatgaattcctaagtcccagctggaatgaggcactacctggttttagagaaccacttggaaggttagttctggaatctcgtggggttttcccggaggccaaatggtattggattggtcttggtgccttgcttggatatgtgcttctgttcaatatcctctacaccatctgcctctcaattctcacattacttaaaagaaatgtgcgagaaatgtctcaggaaacattgcagataaaactagaaaatttaaccggttatgatcaagagccatcatctggaggccgagttaccaatgataaaagatacactgagggtggcaacaatgatgaagcaacttcaagcaatgcaaatcataattctagtccagccaggaaaggaagtatcctgccttttgtacccgtttacatgacatttgaagatataagatacagtatagacatgccaaaggcactgaaagtacagggtatggcagggagtcggttggaactactgaaggatcttagtggttcatttaggccaggagtgcttacagcacttatgggtatcagtggtgcaggcaagacaacattgttggatgtgttagctgggaggaagaccagtggacacatacatggtaatattactgtatctggctatccgaagaagcaagaaacattttctcgagtttcaggatattgtgaacaaaatgatatccattcaccaaatctaactgtctatgaatcccttatgttctcagcatggcttagattaccagccgaaattgattctatggcaagaaagagatttattgatgagttcatggagcttgtggagctctttcccttaaaagatgcattggttggattgcttggcttgagtggattatcaactgaacaaaggaaacggctaacaatagcagtggaactagttgcaaacccatctatcatattcatggatgaaccaacatctggacttgatgcacgagcagcagccattgtcatgaggacagtaaggaatattgtggacatgggaagaactgttgtttgcacaatccaccaacctagtattgatatatttgaatcatttgatgagtctattgaaggtgtcaggaagataaaacatggctacaatccttcaacatggatgctggaagtgacttgtacattgcaggaacagataactggggttaactttactcaagtatacaagaattctgaactatatagggaaagagcatctcacatgtactcgcctttgccatatgccttggggcagagaattccaatatggtggagatggtactattggatttgccctgttgcatggacaatcaatgggttggttacttcacagtttggggatgtagatgacaagtttgataacggtgtgcgtgtatctgactttgttgagagctactttggttacaatcttgacttgttatgggtggctgctatggccgttgtgtcatttgcaattctttttgccatccttttcggattctcacttaagctattcaacttccaaaagagataa</cdnaseq>

Protein Sequence

<aaseq>MLYVIVVELNKKRGEVNKNSIDPSHKVLHRVGIKLPTIEVRYKN LNVEAESYVGSRGLPTILNTYANILKNDLAIRFSWLWKNITVVGLGWNTPINPYVSQH DLHMAELTVRETINFSAKCQGVGHHYDLFLELLRREEEENITPDPETDIYLKAATTGE EKAEIVTNHILKILRLDICADTIVAPNVDSAAEMLVTLGRALFMDEISNGLDSSTTFQ IVNTIQQTIHVLGGTAVIALLQPAPETYELFDDIILLSDGQVVYSGPRDHVLEFFKSL GFKCLERIGVADFLQEVTSRKDQKQYWIHGDDTYRYIPVTVIAEAFQCFHVGQAIRSE LAIPFDNSKSHIAALKTSKHGVNLKKILKANIDREILLLKRKSFLYIFNALQLTLVAI IAMSVFIHTNMHHDSIENGRMYMGVQFFDEVKKWLIWEYWTSPLMYALNALAVNEFLS PSWNEALPGFREPLGRLVLESRGVFPEAKWYWIGLGALLGYVLLFNILYTICLSILTL LKRNVREMSQETLQIKLENLTGYDQEPSSGGRVTNDKRYTEGGNNDEATSSNANHNSS PARKGSILPFVPVYMTFEDIRYSIDMPKALKVQGMAGSRLELLKDLSGSFRPGVLTAL MGISGAGKTTLLDVLAGRKTSGHIHGNITVSGYPKKQETFSRVSGYCEQNDIHSPNLT VYESLMFSAWLRLPAEIDSMARKRFIDEFMELVELFPLKDALVGLLGLSGLSTEQRKR LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNIVDMGRTVVCTIHQPSIDIFE SFDESIEGVRKIKHGYNPSTWMLEVTCTLQEQITGVNFTQVYKNSELYRERASHMYSP LPYALGQRIPIWWRWYYWICPVAWTINGLVTSQFGDVDDKFDNGVRVSDFVESYFGYN LDLLWVAAMAVVSFAILFAILFGFSLKLFNFQKR</aaseq>

Gene Sequence

<dnaseqindica>8467..8724#7872..7920#6738..6871#6146..6436#5715..6047#5453..5595#5243..5359#4986..5142#4809..4912#4132..4234#3735..4016#3317..3639#3180..3216#2804..2857#2598..2674#2422..2517#2144..2222#557..677#107..162#1..33#atgctttatgtcatagttgtagagctcaacaaggtttacaatgttgtagttggcgacattttcatttaatgtcatttaaagtgccaaatgtgtgttactagtttagaagagaggtgaagtcaacaaaaatagcatcgatcctagtcacaaagtgcttcacaggtgagatggcatgaaggatatatatggatcagtgagaggtctaaggtttaaatcatatataccacacgtgctcatatttcgtgtggatgacaatgtcgatatatgaacctaaggatagaggttgtttgcaaaatgtattccctctgcggtttttttctttttgcaatatttcatgttagtgcgaggtgggagcgcccatcatggatcggatggttagactggagtttgtgcatgtgtgcatggtttgagttgtgttcatttgatatcgtgcccacgtataattattttatcaagcatgcttaaatataagggaaaagcaatgttttcaattatgctagtttcatttagaaacttatttccatttctcaattttaaagatgttccgtttgtacagggttggtattaaactgccgacaattgaggtgaggtacaagaacctgaatgtagaagcagagtcatatgttggcagcaggggccttcccaccattctcaatacctatgccaacatattgaaggtatttacatactttgttaaacttactatcttattaataaaaggagtctttttaccatccttgagtaggtgcaggtaccaggaggtagggataaaacatgattggaaaagatactcaaaccatttccgcaaccatgtttttttttcaggacatggagttgaaatgctagagctacaattaaaaaaaaacatcgctaccactgaagtactagaaaatatcaaaagttgaactacatgaatacaacctcgaaaataccgtatcacaatagaacagaagttatagtcatagcttcactataaatttacatcacatacaacagtaggaaaattctcagttagattgaaaggtttcctctgtaccttcaaaattagatgtttataaaaggaaaatattctaccatatccaaaaataaatataccatggttaccattttccacaaatatttaataatatccatgcacataattccacggtaaatattatctcatgaaacatttaagaaccaaatcattttcatggtgaatttaattatgatgatgatggtggtggtggtggtgatcgtctactccatatggtatactgtattggcgtacatataccataccaaaaatacatataccgtatcatatcttgtaacagttcctaaacattagcgacacggccatgtgcaacagacaaggtaacagagtctgattaaggaagagtacttactcctagtcagacaagagccttcgcacaagctgattagcctcaattatttagcaaggtcgctgaggaactcaaaggacctacgagtataaatatcggccacccctagggattatggcaaagctaagccataattcatgtgacacgtatatttatttttggatatgttagaatttttgtgatggagaagcaaaactatgcactggaggaagaatgataaaggagagaagtgcaattttttttaatggtggaagagataatacagttgcaatgaatgtaaaagaaaaaaaaatgaagcaagaggtataaagatggtaaataaggtctaataaaaataatacctatctgtatgttggagaaccagcgtataccaatttgaataaaattgcgccccacaccaaatactggttcatagccattacttccgaattcaagtagctctaactcaaggaatctgtgcatagtcgattgtttttagttagaagatgacattacttttgcagcagcctaaatatttactgcatatggctcccttattttactatattccatgtgtagtgacatggtgaaaaattgacaatcacctctaaacagggcctggcgaatactcttcacatgacaacaagaagtaagcaaaaaatatctgtccttcacaatgctagtgggatcatcaagcctcacaggtcataacatctcagcaattgacaatgtctaaattatctcgatgctatatataacttttatcctgctgttttcagaatgaccttgctattaggttctcctggctctggaaaaacatcactgttgttggccttggctggaacactcccatcaaccgtaaaagtactttcatttatgtttttcaatttttttaccatgctacttggttggcctactggttgtcttcagtatatataatctagtatgcttgccgtactaatataaggaaatactacaatgcaattacaaaaggtatcggggatgataacttacaatgggcatacaatggacaaatttataccccaaagatccgcagcttatgttagccaacatgatctgcatatggctgaactgacagttcgtgagacaatcaatttctctgcaaagtgtcaaggagttggccatcactatggtaagacaggaaatggggagtttaaacttatcatagtgtcatatcatatgaaaaactaacattttatggaaaattttcagatctgtttctagaactattgagaagagaagaggaagaaaacattacaccagatcctgaaactgatatatatttgaaggtacaatggagttcttaaatcacaactcaccttatccagtatgttgagcaatctcttcatgtttttaccatctattaatgttccagtataaggtttgatgaacatcaatgtctcattttgcatatgcaggcagctacaacaggagaggagaaagctgagatagttacaaatcacatactaaaggtatatgagcactatctacttatatacaatgctatagaacgcccctcagagaacaacataatatgtagcgtgtctcagagagcagcaccctcccttttcttatttttctattccgcttcctcatcctaccatttggtccactaaaaacttactacctccctgaggtaaataaattaccaccctttgtccctggatactgctagaaccctacttataggcctggtaaaaaaaattatctgttgaaaatttcttctcattcatgtgtaagttcacatgtatacgcgataataattcttttactttatttttttatcatttgaagattttgcggttggatatatgcgccgacacaattgtaggtgataatatgttgagaggcatatctggagggcaaaaaaggtgactaactacaggtaatttagaattggatttacttaagatgtttggatgctcatacagcccctaatgttgattctgcagctgagatgcttgtcacactaggacgagctcttttcatggacgagatatcaaatggacttgatagctcaacaacattccagatagtgaacaccatccaacaaaccattcatgttcttggtggaacagctgtcattgctttgctacagcctgcacccgagacatatgaattatttgatgatataattctcctctcagatggtcaagttgtctatagtggccctcgtgatcatgtgcttgagttctttaaatcgttgggattcaaatgcctagaaagaataggtgtagctgacttcttgcaagaagtgagttttctcactatgttcaatcatggtagtatcagatgattaaatttggttgcagtgtataattgttactaaatatgagtgaaatgtgataggttacatcaaggaaagatcagaaacaatactggatacatggcgatgacacatatcgatatattcctgttacagtgattgccgaggcatttcagtgtttccatgtcggccaggcaataagaagtgagttggcaatcccatttgataacagcaagagccatattgcagcgctgaaaacatcaaagcatggtgtcaacttgaaaaaaatacttaaagctaacattgacagagagatattgctgttgaaaagaaaatcatttctatatatattcaatgcacttcaggtgattctgacaatctgagacattttatattatattatagcaaaacaacccacaatttctttggaacaattgaagctaattggcctctcttacattatttctttgacttgttcagttaacactagtggcgataattgcaatgagtgtctttatccatacaaatatgcatcatgactcgatagaaaacgggaggatgtacatgggagtgcagttctttggtacgttggcaataatgtttaaagggttggcagaaatgggagcagctcttgcaaatctcccagtttttttcaagcaaagggatctactcttctatccagcatggacatattccttgccatcatggatcattaagactccaatctccttccttaatacaataatttgggtctccataacatactatgttattggatttgatccaaatatagagaggtaagaaaaacaaaattcaatacatcggacaaattcttgtaatgaatatattgcaaagattaatgaaaacaatgcaatcttgtagatgttttagacaattccttgtgctttttgtaatgtccgaggcaatatgtggacttttccgtttcattgctgctcttacaaggcatccagttgttgcaagcaccgtgagtgaattctgtatactaatagttatggtttcaagcggattcatcctatcaagaggtacacaaactatctgacaaaacacgacatgatattggcattacttctgatattatttccacatgtgttggtacttgtatacatattgtatgatatgtttgtttgatttaacagatgaagttaaaaaatggctgatatgggagtactggacatcacccctgatgtatgcactaaatgccttagcagtaaatgaattcctaagtcccagctggaatgaggtaaaaaaaaacttatggaatcaatcgaaatccatatatcataatatgtccattaaaaacattttgttatcaggcactacctggttttagagaaccacttggaaggttagttctggaatctcgtggggttttcccggaggccaaatggtattggattggtcttggtgccttgcttggatatgtgcttctgttcaatatcctctacaccatctgcctctcaattctcacatgtgagttagagaaaaaaatgaatttcttatattagtaaaagctattgttgttttaaaaaggggctatacattctaaatttatgcaccatgttctctgcagtacttaaaagaaatgtgcgagaaatgtctcaggaaacattgcagataaaactagaaaatttaaccggttatgatcaagagccatcatctggaggccgagttaccaatgataaaagatgtaattttatattcaccaatataaaatactatatatcacaatgagatttaatttaataaattatataactttcttctgtgttatgtctactagacactgagggtggcaacaatgatgaagcaacttcaagcaatgcaaatcataattctagtccagccaggaaaggaagtatcctgccttttgtacccgtttacatgacatttgaagatataagatacagtatagacatgccaaaggtacacaaatattcctttgtctggtcttgacatgcatgttctatctataaatcgcctataaacataacatttatgagcaaactccatatataattgtctttatccaacaaaacatgtaggcactgaaagtacagggtatggcagggagtcggttggaactactgaaggatcttagtggttcatttaggccaggagtgcttacagcacttatgggtatcagtggtgcaggcaagacaacattgttggatgtgttagctgggaggaagaccagtggacacatacatggtaatattactgtatctggctatccgaagaagcaagaaacattttctcgagtttcaggatattgtgaacaaaatgatatccattcaccaaatctaactgtctatgaatcccttatgttctcagcatggcttagattaccagccgaaattgattctatggcaagaaaggttagacatgaaagaaacacttttttgaacgtcaagtagtatataagtacgtatcatgacatgacatgctagtcttttttcgtgtgcttggtttgtagagatttattgatgagttcatggagcttgtggagctctttcccttaaaagatgcattggttggattgcttggcttgagtggattatcaactgaacaaaggaaacggctaacaatagcagtggaactagttgcaaacccatctatcatattcatggatgaaccaacatctggacttgatgcacgagcagcagccattgtcatgaggacagtaaggaatattgtggacatgggaagaactgttgtttgcacaatccaccaacctagtattgatatatttgaatcatttgatgaggtgaacaaaattatagcaatatagtgcattttctcacacagatttaatgggtatacaagaaaaaagtaaatcactggtggattaacattatttgcatcccactcaattccttctggtattgttcatatttacagctcttcctaatgaaaagaggaggtgaagcaatttatgtaggtccattaggacaacattcatgtgaattgatcaaatattttgaggttagaaaaaaatcgcataatgtaatacatgcttgaatttttgcactcagaaacatgctattgaactgctttcatttttaaagtctattgaaggtgtcaggaagataaaacatggctacaatccttcaacatggatgctggaagtgacttgtacattgcaggaacagataactggggttaactttactcaagtatacaagaattctgaactatataggtagggatggggtcatcctttagttaatagtctgactatatacctttaatcgttgctccagcaacagaaaacctagatgaaaatcaaactttgtgtgatgtgcaagatgtctggttccataatggtatatgtgataaatgtgtccatgtttgtggtatgtagaaaatactttgttctatcattagttacttaagtataggttgaaaaaagagaagacaatggtgtccttttatgcatgtctaaacaattttcaacaagctggggaaacaactaaaattacaaatatgatattctgaaaaaacaataatataagtttttttcaatattagtaaagaaatgaaataacaatacaaggtagtggcaaaagcaaaaaatatccctacatgaatcatatattgtgatgatatcataatgctaaactacagatgcttcaaaagatctgcaatttacacttttataatgaatgtttcaaatatatgaaaaatttaataggtaatgttattgtttgatgatattagtgctttgttttccctacaggaggaacaaaaatttgataaaggagttaagcacaccccatgacggttcaagcgacttattgtttccaactaaatattcacagacctttgttatacaatgtttggcttgcctctggaagcaacgtttgtcatattggaggaatcctccatatattgctgtgaatttcttcttcaccgttgtaattgcactattgtttggaacaatgttctggggcgttggtagaaaaaggtaaatatatataacaataaacacaaggaaatattttatatttgtgattttctttacagattttaaaggttgccattggaccatgcttaccctaaatattcctttctcataggcaaagtcaacaagccttgctcagtgccatgggttccatgtattccacatgtttcactctaggagtgcagaactcttcttcagttcaaccagttgtcaatattgaacgcacggtcttttacagggaaagagcatctcacatgtactcgcctttgccatatgccttggggcaggtatggttctttggcatcatagtgtttacacatgaggctagatataatgtttcaagattgtgttcaatttctacaaaactaaaacccttggtaagtggacagaaatgataaatgaataagctttgttaacatctagttctattgcaggttgtagttgaacttccttacatcttcctccaaaccttgatatatggtgtgatagtgtattctatgatgggatacgagtggacatgcaccaagtttttttggtacatgttcttcatgtacttcactctatcatacttcacattttatggcatgatggcggcaggtctaactccaaactacaccatgtcctctattgtttccacaactttctatgccatatggcaccttttctctggatttctaataccaaaaacagttaagtatactagcttttctcaaatatcaatgtatacaaggttcctagccaaattatctcaaagccaagactagaaaaaaaattaagaagtactaccaaacttcactcctagttttcctaaatatggctccttttatctgcagagaattccaatatggtggagatggtactattggatttgccctgttgcatggacaatcaatgggttggttacttcacagtttggggatgtagatgacaagtttgataacggtgtgcgtgtatctgactttgttgagagctactttggttacaatcttgacttgttatgggtggctgctatggccgttgtgtcatttgcaattctttttgccatccttttcggattctcacttaagctattcaacttccaaaagagataa</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0332360, RefSeq:Os09g0332360