Difference between revisions of "BGIOSGA003370"

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(Created page with "{{IndicaGene| GeneName = BGIOSGA003370| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA003370, complete gene.| tag = OsI_016...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA003370|
 
GeneName = BGIOSGA003370|

Revision as of 18:23, 20 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA003370

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003370, complete gene.

LocusTag

OsI_01613

Ensembl Transcript ID

BGIOSGA003370-TA

Ensembl Protein ID

BGIOSGA003370-PA

Length

7575

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:13026758..13034332

Sequence Coding Region

13026758..13026918,13027074..13027269,13027341..13027448,13028762..13028858,13030232..13030323
,13031097..13031162,13031440..13031514,13031599..13031704,13031786..13031832
,13031902..13031959,13032345..13032394,13032775..13032831,13032956..13033038
,13033116..13033151,13034000..13034033,13034126..13034188,13034318..13034332

Genome Context

<gbrowseImage1> name=IndicaChromosome01:13026758..13034332 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:13026758..13034332 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCCGAGGCTTCCGATGTTGAACAAGTCGAAGATACAGACAATGAAAATGATGTTGTGATAGTGGGCAGTCGTCAAAGAGAAAGATGGGACATGAAGGAATCTAAAGTACGCTCGGCAACCAACGATCACAAATATATAGTTCCCTTCTCTCGGTGGAATATATGGGTGCAAAGTTCACGTCCGCACACCATAAAATTAAGTCTCAAAACACTTCAAACAGTACTAAAGGATGGACCACTTGACCGTGATTGCTTCAACATGGCCATACGCAAGTTCATGTATGAAAACATCCAGTCGCTTCACAAAACCAGCGAAGCAATAACGAAGCATTGCCTGGACTTACCATTTTTGACTGCTACTGGATTTGGTATAAGTCCGATGTTCCATAAGGATATAGATCTTGCAGGGTCGGTTGGTAGCTGGTCGAAAATCCATTATGAAGTTGCAAAATGCAAATCGGTCGGTTTCGTTTCCGCTCTCCGCTCCACGCGGCGTCGCCTCCGGAGCCCCCAGAAGCTTCTCGACCCACCACCACCGCTCTCCCTCTCCCCGTCAGAAACAATGAGCAGACGCAACAGCCGCACCATCTATGTAGGCAATCTCCCTGGGGACATTCGTGAGAGGGAGGTTGAGGATCTCTTTTACAAGTACGGTCGCATTTTGGACATTGACTTGAAGATTCCTCCAAGACCTCCTGGTTATGCTTTTGTTGAGTTTGAGGATCCCCGTGATGCTGATGATGCAATTTGCGGCCGTGATAGGTATAACTTTGATGGCTACAGGTTGCGGGTGGAATTAGCTCATGGTGGAAGAGGTCAATCTTACTCATACGATCGCCCAAGAAGCTATAGCAGTGGACGACGTGGAGGTGTTTCTAGGCGTTCTGAATATCGCGTTATGGTCACTGGCTTACCTTCATCGGCATCATGGCAGGATCTTAAGGACCATATGCGGCGGGCTGGTGATGTCTGCTTCTCTGATGTATACCGTGAGGCTGGAGCAACCGTTGGAATTGTGGATTATACAACCTATGAAGACATGAAGTATGCGATTAGGAAGCTTGATGACTCAGAGTTCAGAAATGCATTTTCACGGGCATATATCAGGGTGAGGGAGTATGATGATAGATCAAGAAGCAGAAGCCGCTCTTACTCAAGAAGTCGTAGTTACAGCAGGAGCAGGAGTCCAAAATCTGTTTCTCGGTCACCGTCACCTGTGGATGAAAGATCAATATCAAGATCACGGACTCCTGTTTCTTCACCTTCTCGTGGAAGATCTGTTAGTAAAAGCCCAAGCAGGAGCTTATCCCGCTCTCCCTCTCCGGTGAAGTCTGATTGA</cdnaseq>

Protein Sequence

<aaseq>MAAEASDVEQVEDTDNENDVVIVGSRQRERWDMKESKVRSATNDHKYIVPFSRWNIWVQSSRPHTIKLSLKTLQTVLKDGPLDRDCFNMAIRKFMYENIQSLHKTSEAITKHCLDLPFLTATGFGISPMFHKDIDLAGSVGSWSKIHYEVAKCKSVGFVSALRSTRRRLRSPQKLLDPPPPLSLSPSETMSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAICGRDRYNFDGYRLRVELAHGGRGQSYSYDRPRSYSSGRRGGVSRRSEYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGATVGIVDYTTYEDMKYAIRKLDDSEFRNAFSRAYIRVREYDDRSRSRSRSYSRSRSYSRSRSPKSVSRSPSPVDERSISRSRTPVSSPSRGRSVSKSPSRSLSRSPSPVKSD</aaseq>

Gene Sequence

<dnaseqindica>1..161#317..512#584..691#2005..2101#3475..3566#4340..4405#4683..4757#4842..4947#5029..5075#5145..5202#5588..5637#6018..6074#6199..6281#6359..6394#7243..7276#7369..7431#7561..7575#ATGGCGGCCGAGGCTTCCGATGTTGAACAAGTCGAAGATACAGACAATGAAAATGATGTTGTGATAGTGGGCAGTCGTCAAAGAGAAAGATGGGACATGAAGGAATCTAAAGTACGCTCGGCAACCAACGATCACAAATATATAGTTCCCTTCTCTCGGTGGTTTCTGCTATGAGTTTACAAGAGTTGATAGGCGGCCTTTTCCAGTACATACAATAAATAAATTGTGCCGAAACCTTGGAGTAAGCCACTTCTATATAATATATCTACCCCATAGTTCAAAGATGCACTAACTTATTTTTTTTATTGATTGACAGGAATATATGGGTGCAAAGTTCACGTCCGCACACCATAAAATTAAGTCTCAAAACACTTCAAACAGTACTAAAGGATGGACCACTTGACCGTGATTGCTTCAACATGGCCATACGCAAGTTCATGTATGAAAACATCCAGTCGCTTCACAAAACCAGCGAAGCAATAACGAAGCATTGCCTGGACTTACCATTTTTGGTAAGTTTTTATAATCTACCCAATATTGATTCTTTTGCTCATATTTTAAACAATTATTGTACATCATATAGACTGCTACTGGATTTGGTATAAGTCCGATGTTCCATAAGGATATAGATCTTGCAGGGTCGGTTGGTAGCTGGTCGAAAATCCATTATGAAGTTGCAAAATGCAAATCGGTAAGCTAACTATCCTTTGTTCTTATTTGAATGTGTTTTTTATATTATCTTGACGGTTGACTTTTTCCAGATTCTTATACCAGTATGTGCTGTTGGAAGCTATATCTTGGTCATACTGGACCAAGAAAGCAAAACACTTTATCTTCTAGACCCTAATCCACTAAATCCAATGTATCTATGAGATATATAAAAAAATTGTTAAACGTTACCAACTATTTCAACAGAGCCATGCGTGTGGCATGTCTTGGCTCTAGGTGGACTGAGGATATCGACTTGTGGCGCCATATATATGTCACAAATCCGGTGGCTAACTCGTAAGTTTTCTTGTAAAATCTTGTTTGATCCAATAAATTATTTTTGTCTAACACATGGTACCTAACTATTCAAATTTCATAGGAATTTGTCGGGTTGTCTCGTACATCTGTTCATGCGATCCTGAAAAGATGGAGCACTTCATTTGCCGTCTTTTAAGGTCATTCTGACTAGCATTGACATTTAGAATATTATATTTTATTTTATAATACAATTATTTATTTTATAAACATATACATTTGCAGGATGTTGACGAGCTAAGGAAACAAATTTTTGCTACATATACTGATGTACGAGCAAAATGAGTGCGCAAGCAACATTCCTAGCGGCGCACGAGATTTTCTTCACTGTATCGCAAATGCAAAACATTAGAATAGTCATTCTTTACCTATGGGGTGTATTCTATACATTACAAATGCTTTATTTAAATAATAGAATAACTCTATACTTCTCTAACATATTTTTCTGCCCGCAACAAATAATGGAATAACTCTATACTTCTCTTACATATTTTTATGCGTATATTGCCTTTTATATTGTGTACATAGGGTATATTATATATAATTAAGTCTGTTAAAGTTTTACTGTGCCCACGTAATATCATAGTACTGTACCTTACATGAAATATATTTAATGTACTATATGAATTTAATTAAAGTTTAAATGCACAGATCATATAAAAATATTTTTTTGGTAACATGAAATTTTTTTAAAGATACAATTAAATAAAATTGCACTGTAGCATTTAACACGGACATATTACTAGTTACATTAAATATTAGTCAAATGTTTTAAATATTAGTCAAATGTTTTAAAGGTTGAATTTTGAAACGCCTTATATCATGGATGGAGGGAGTAATATTATTGATTTATCCGTCGCTTTCGAAATGGGCACCACGCACGCATCTCAAAGCCACACACGCGTCTCCACAACACGTCCCTCCAGGTCCAACCCCACCACATGTATCGGTTTCTCGTGGGCGGCCAGATTTTTGTCGCAGGTCGGTTTCGTTTCCGCTCTCCGCTCCACGCGGCGTCGCCTCCGGAGCCCCCAGAAGCTTCTCGACCCACCACCACCGCTCTCCCTCTCCCCGTCAGGTGCGTTCGTCGGAAATCATCGGGAAAAACCCCGAAATCCTCTCCCAGCTTTCCCTTTTTTTTTTCCCTTCTTCTCCGCGCGCGTGTTCTCCTCGATCTCTCCGATCATCATCGCGTGTGGTGGCCGATTGGCTGCGGTTCCCTTCCCGGAAATTCTGCGGCGCGCGCCGCCATTTTTATCCGTCTGTCTACAGGGTAGGGAGTTCTCAGATTAGAAACCAGGGGTTCTCCCGTTTTGGCGCTAGTTATGGTAGAGATTTCGTTACCTTTGCATATGCCATGGCTTCGTCGGCTCTATGCACGGAGCCTATGTATGTATGTATGTATGCTTTTATTTTTAAGTTTGTCTCGTCTAGAGTACGCGGTGGCGATGGGAAACAGCCGCTAGATTTGTTTATTGTTTCTTTACCCTAATCACAGGTATGGGTATTTGAGATTAGTTACGAAACATCTTAGATATATGCGGCTATTCAGTTTTTTTTTAATGTGCAAGAATCCAAAAGTCTATTAATTAGCATGTAAAAGGACTTGTGCTGATAAATTCTTTAGTTTTTAGTACAAGTGTCTGTATCTAGTTTCAATACAAGTTGCAATCCAGACTACGTTAATAACACTAAAAGATTGTATTGATACAAATCCATGATTATTATGGCGCATTGAAGAGAGGAAACAGAGGAAGGTAGGCTTGTCCTGCACGGCTTGAAGCTCTGCTTGCCTTGGCCAAGGTTTGGACAGAGGCCCTTTTGAGTTCTATACACTGGTTGATTACTCCCTGTTACAAATCTGAGCAATCTTTATCGACGAGGGCCTAGCTAATAATCAGGAAAAATAGAGATAAAGTGGAAAGTAGATAACAAACGCCAAACTAGGAAATAGATGACTGCATATCTTTCAGCCGGATATGGTCCCTCCTGCTGTAGGCGCGGACCCAGAATGCTTGTACAGCTGGTATTTATACCTATTTGGCAGGTAGATAATGATGATTGAACATGGTATTGGTGCTTTGGGTGACAGTTAAATATTTCTAAGGAAATCACTGCACAAATATCATTTTTTTTGTTTGGGAAATATCTTGTTTTTGTTTTGAAAAATTTAAAGTTTATGGTGAAATCTCTTTTGTGCAGCCTTGGTATTATGTAAATCTCCAAATTCTGTAGTTTAGTGTTATACTGTCGAAATTTGCCCTTTCCCCAATCTTTGCTGTTGTTTGACAATATGCGCCTACACAAAATTAGTACAGTGCTACGCTCCTTTGTGCTTGAAATGTTTCCCCATATTATTTATTAACAGAATCTTGAATTTACAAGGTCATTTTATCTTGCATATTTGCATCTATAATTTTAGTTGACCTGCTTTAACTCCTATATATGCAGAAACAATGAGCAGACGCAACAGCCGCACCATCTATGTAGGCAATCTCCCTGGGGACATTCGTGAGAGGGAGGTTGAGGATCTCTTTTACAAGGTGAGCTTTACTGCTTTACAATCTACCTCAGTTCTTCTCATAAGCAACTACCATTTCAATCTGGTCGTAGCTGTATAGGCATAATACATTGCTTATTTTCCTACCTGTTAAGTTGCCTTAGCTTATTAATGTGAGAAATAGCTAGCGGTTGAAGGATTTAAATCACTATTATGCTAGTGGTTGAAGGATTTAAATTATTATTATTATAGTATTATAAGAGTTATAAAGGATTATTGTTCTGTAATTCGTGGATGAGTCTAAGGGTAAAGCAATTGCGGGAAGAAAGGAACCATCTGGCCTTGTGTCGCCAAAGAAGCGCTATTTAGGAAGTTGTCTTGTCTGTATTAAATATCTGTTGGCTGTTTCAACTTGCGATGTCTTCTCCTGCGGTTTTGGTAGTGAATAATCATTTTCTTAATAGCACAACCATTGATGCTGTTGAGCATCCATCAGCGTAAACAGTTGGGTGTGATTTATCCTAGATGACAACTGATAACCTGTGTGCCATTGCGAAAAAGTAGTCATATATTGCAGATGGGAACGTGTTGACAAATGATATATTTCATGAGTCATATTCAGATTAAGGGTGTTGTATTTGTACTTATTTTCTAAGCTAATGTGGAGGTGCAGTTGTGAAAAGTTTCACTAATAAATCCAATTAAGTTTATGTATATATGTTATTCCAGTGTTTTTATCCCTTACAATTGCAATAAGAACCTTAATCTTGATAACATGCATGCTTTTTTTTTTCTCATAAATTTATTCTAATGCAGTACGGTCGCATTTTGGACATTGACTTGAAGATTCCTCCAAGACCTCCTGGTTATGCTTTTGTTGAGGTGAGTGTCCTTTTGCAACAGCCATGTCTTCTGTAAGGGTACTTGTATTGAAAATTTTATTGAAATTTATAATATAGTCCCTATTATTACCCTGATATTAATATCATTTCTTCTTTAAAGGATGGTTGTTTTCAATAAAATTTACTTCTAGATTTTTTTCAAGACTAAGTTTTAGTTTAGGTATAGCTAAGTTTTCTTAAGATGTAAGTGCATCTTTTAAGATGTATAGCTAAGTATTGGATGCTAAATAGCTAATAGAAAATATGTGCTTTTGTAGTTTGAGGATCCCCGTGATGCTGATGATGCAATTTGCGGCCGTGATAGGTATAACTTTGATGGCTACAGGTTGCGGGTATGGATATCAAAATGTTTTTCTTCCGGTCTTCTGGTCTGCTTTGGTTTTCTGTGCCTGTGGCTTTATATTTTCTGTACGTAGGTGGAATTAGCTCATGGTGGAAGAGGTCAATCTTACTCATACGATCGCCCAAGAAGCTATAGCAGTGGACGACGTGGAGGTGTTTCTAGGCGTTCTGAATATCGCGGTTTGTAATTCTTTCTCTTGAATGTGTTAGTCGGTGTATCCCAACAAAGAATGTGATGTTTCTATTTGTTGGACCATGCAGTTATGGTCACTGGCTTACCTTCATCGGCATCATGGCAGGATCTTAAGGTATTGGTGTTGTACATAACTTCTATTTATAGATTTTTCTCTAATGACCTAATTATTACCTACATTCAGGACCATATGCGGCGGGCTGGTGATGTCTGCTTCTCTGATGTATACCGTGAGGCTGGAGGTTAGTAATAAATGTTCTCTTCTTGTTATGTCATCGTACCATGGGCCCTGGGATGAGAATCAATTGCTTATGTGTTGATCTTAGTTTTAATTCATTGTCCTCCGAAATCAAGATTCATGCTTTAATATTTTTTCTGAGAATACAAAAGCTGTGTATTATTTCATTAAGACAGAGACTGGATGACGTCTGTCAGCTGGTCGTCAGGCCCGTCAAACCCCCTCAGGTCAGGGAAAAATAATTATAAAAGAAGTCCTAAAATGCTAAAACTGAAAATGAAAGAAACGACAATGTCCTATACTCAGAAGCAACCTCTGAGCCTGCAGAGGCCTTTCTATATAGTTTGCGGGCTATGTCAGTAATATTTGTCTTTCTGTTTGTGTTGCAGCAACCGTTGGAATTGTGGATTATACAACCTATGAAGACATGAAGTATGCGGTATGTTTGATATCTTCTGTATAAAGTGCATTCTGAAAATATTATACTTTTTGGTAATTGATGAGGGAACATTTTCAGATGTGTTATTCCTGTTATACACTTTGGTCATATACGTTGACATTTATGGCAAGATTTGGTCAAATTTTTGAAATGTTGACTATCAATTTTATATTAGAATAAGTTTATAAAATCTAATAAATTTATGACATTATGATAGTACTTTTCAAGGTAAATCTAGCCTACCATCTTTTTTTTTTCAACAAAGCATTTGAAAAATTATTAATGATTGAAGTTTCATAAGTTTGACTTAAAAATCAAATATTTATGATTAGAGGGAGTATTTGGTATGTATCTCTTATGATCTTTTGATGATCTTGCAGATTAGGAAGCTTGATGACTCAGAGTTCAGAAATGCATTTTCACGGGCATATATCAGGGTATGGATTTATTTGTTTTTTGACCATGAGGGTTTTTCCTGTTTTTGCTATGATAATAGATAATATGTCTTCTAGATGCATTTGATTGTGATCTTTCGTCAACGTGTTCTTATTTCTATGATAGGTGAGGGAGTATGATGATAGATCAAGAAGCAGAAGCCGCTCTTACTCAAGAAGTCGTAGTTACAGCAGGAGCAGGAGTCCAAAGTATGTTAGATTTTTATTCTGTTTTACACTCAAGCCTCCCTATGGCAGCACTAATTGTTGACTGCATTGTTCCACAGATCTGTTTCTCGGTCACCGTCACCTGTGGATGAAAGGTATATCCTTTTATAACATCAGCTTTTTACTGGCATGCCATTTTTGTCGTTAAAGAGAAACAGGAGTATGTGTTGGAATTTGGGTTTTTATATACTTTGGAACTTCCACTGTGGTTCATAAAACATATGATTGAAAAGCTTGTAATGTATTTCCTTTTTTTTGACCGACTAATGTATGTCTCCTTTTAAATTGATATGACTTAAATTTCCTCTATGGCCCAATGACTAAAACACAGTGCTGGTGGCTAACTTGCAATGTTCAAGGTTTGCTTTTGTTTTTCCTAGATCTGGCCATGCGGCAATCTGGGGACTGCTTTCATAGATTTTGGATATGTTGAGAATCGAAAGGATGGTTTGGAACTTTGGATAGTAGAGCTGGATTGTGATGCATGTATGGCAAATGGGCAACAACCAGTCCTAGGAGCGAGCTAGGCCTGACAGTAAGGATATGTGGAGTGGATTTGTGTTATTATTGAGAATTTGTTGACCGTAGGCACTTCAATTTCATATACTGCATGACATGGACCTAACTTACATGAGATCTCAAAGTTTTCTTTTAATTATTCTTGCATCCTGATAAAACAAGATTATGGTACTTGGTAAGCATTTTTCTGGAATATGTACGTGTTTTTTTCACAACAAAAGAAATTGATCCTGCTTAGTTTTTATGCGGATTCTGTTGAAATAGAGATTTTGTTTTGTTCATTGGCACATATTAGCCATTTAGCATGAATACAAAAATGCTTACTTATCAGTGTGGTTCTTCTGTAATTTGTTTTGATATTTCTGTTAGTAGTTTTTGGATGAAATCACACTGAGTGATTGGTTTTGCCTGTGAAATTTTGCAGATCAATATCAAGATCACGGACTCCTGTTTCTTCAGTAAGTCTTGCAGCAAGTCATCTATTATTAAAAAGTGAATTAAGTCCTATTTTCAATCATTTTGTTTATTGCAATTTGCCTTTTTTTGGCAGCCTTCTCGTGGAAGATCTGTTAGTAAAAGCCCAAGCAGGAGCTTATCCCGCTCTCCCTCTCCGGTAAATACCAAATAATTCCTCCCACATTTACAATGCCCCTCCCGCCCTGAACAAAGGAAAAAAAAAATAGAGAGAACTCATTACACTGGTGAAACACTTTATGATCATTTGCTGCCTACGTTATTGCAGGTGAAGTCTGATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003370