Difference between revisions of "BGIOSGA004976"
(Created page with "{{IndicaGene|
GeneName = BGIOSGA004976|
Description = Chromatin assembly factor-1|
Definition = Oryza sativa Indica Group BGIOSGA004976, complete gene.|
tag = FSM|
tid = ...") |
|||
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{IndicaGene| | {{IndicaGene| | ||
GeneName = BGIOSGA004976| | GeneName = BGIOSGA004976| | ||
Revision as of 18:32, 20 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
BGIOSGA004976 |
|---|---|
| Description |
Chromatin assembly factor-1 |
| Definition |
Oryza sativa Indica Group BGIOSGA004976, complete gene. |
| LocusTag |
FSM |
| Ensembl Transcript ID |
BGIOSGA004976-TA |
| Ensembl Protein ID |
BGIOSGA004976-PA |
| Length |
5448 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:42609900..42615347 |
| Sequence Coding Region |
42609900..42610520,42610618..42610717,42611023..42611167,42611846..42611969,42612421..42612938 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome01:42609900..42615347 source=RiceIndica01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome01:42609900..42615347 source=RiceIndica01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGGAAGGCGGCAAGCTTCTTGGCGTTGCTCACCCTGAACCTGCTAATAATATCGATGCTGAGCTGCGCTATGATTTAGGACAGTCGCGAATGCAAGTAGATGGACCTGTTGTTCTCAACCGATCTGCCGAGCTCGAGCCCAGCGATTCGATGGCCATTGATGATGTCCCAGTTGAGGCATCAAGCCAACCTGCGCCGGCGAAGCAGTCTCCTGCGCTGATGGATACCATCGTGGAAGTGCAGAAGCAGCTGAAGAGGAAGAGGGCTTCCAGTGGCCCGGCGCTTGCTGCAGCAGACAAGGATGCTCTAGTTGCTGGATGTTGCCAGGAGCTCGAGGGCTTATTGGAGTATTACAGGGAGGTTTCGGGTCACAGGATGCAATTCGAAGTTGGGAACCTGTCGACGAATGCTGCTATCGGATGCTTGCTAGAGGAGAGCAGTCTTGGATTGTCCAAGTTGGTGGATGAGATATATGAAAAGCTGAAGGGAATGGAAGGCGTGTCGGCGACTTCGGTCCGGAGTTCTGTGCTGCTCATTGGGCAGAGGATGATGTATGGGCAATCTAGTCCGGATGCTGATGTGTTGGAAGATGAATCAGAGACGGCTCTTTGGTGCTGGGAGGTGAGAGATTTGAAGGTGATTCCTCTGAGAATGCGTGGACCTCTGAGTACGCGTAGAACTGCTAGAAAGAAAATCCACGAGAGGATTACTGCTATTTATTCAACGTTATCAGTTCTAGAAGCTCCGGGAGCTGAAGCTCAAGTAAATGATATGAGGAAAGCATCACTGAAGTTAAGCAAAGCACTGAACCTGGAAGGTATTAAATCATTGGTGGAAAGAGCGACACAAAAGAGCAACATTGAACGGCGTGCCAAAAATACTGGATCAACAGCTAAAGAGCCAATGCAAGAGATGGTGAAAAGCAATAACGATACTGGGATTATTGAGAATGTGGATGACTCTCAGCTGCAAAAAAACACCTCAACTAATGAAAAAGATACTCAGAAAGCACAGAAACAAGTTGAAAAGGAGCTAAAACAGAAGGAGAAAGAAGAAGCTCGAATGAGAAAACAACAAAAGAAACAGCAAGAAGAGGCGCTGAGAGAACAGAAACGACGTGAAAAGGAAGAAGCTGAAATGAAGAAACAGCAAAGGAAGCAGGAAGAGGAAGCACAGAAAGAACAGAAGCGCCGTGAAAAGGAAGAAGCTGAAACGAGGAAGCAACAAAAGAAGCAGCAAGAGGAAGCTGAGAAAGAACAGAAGCGCCGTGAGAAGGAAGCTGTCCAACTCAAGAAGCAACTGGCCATTCAGAAGCAAGCTTCTATGATGGAACGGTTTTTCAAAAATAAGAAAAACAGTGAAAAGCTTGAGAAATCTGGAGGAAAGGACTCAGGCGTTCAAACTACTGATCCATGCACCACCAACAAAGAGGTGGTACCATTGGTTACATCCATAATTGATTCTTCATTCTCTCAAAAAGAAAACTGGGCTTTGGAGGATCTTCGCAGATTGCAGATCAGTGGTTGGCAGAAGTTATCTAGCTATAACAGGTCCTCCAGGTGGGGGATCAGAAACAAACCCAAGAAAGAAGCTTTTAAGGAGCTCAAACTTCAAAAAACCTCTGATAACATGCTTGAGGAAATTCTTTCTCCTAATGAAGATACCTGCCACAATTTAAGTCAGGAAAATGAGCCAGATAAGTCAGCAAATGATGTTGATATGCTACCAGCGGTTGAGCTACAGTTTCATGGCACCAATCATGCTAATCCTCTGCCAACTAGATCAATAAAGCGGAAGCTTTTGCAATTTGACAAAAGCAACAGACCTGCATATTATGGGACTTGGAGGAAGAAAAGTGCTGTTGTTGGCCCAAGATGTCCACTTAAGATGGATCCTGATCTTGACTATGAGGTTGATAGTGATGATGAATGGGAAGAGGAGGATCCTGGTGAGAGCCTTTCCGACTGCGAGAAGGACAATGATGAAGTTATGGAGGAGGATTCCAAGATCACAGATGAAGAGAGCGAAGATAGCTTTTTTGTCCCCGATGGTTACCTCTCGGATAATGAGGGGATTCAGATTGAAAGCCTCTTGGACGACAAGGATGAAGCCAGTAGCTCACCACCAGACCAGTGTGCAGAAGTAGAGGAATTTAGGGCTCTACTACGCCAGCAAAAAGTACTAAACACTTTGACTGAGCAGGCTCTCCGCAAGAGCCAACCTCTAGTGATATCAAACTTAACTCATGAAAAAGCTGAATTATTGACTGCCGGAGACCTCAAGGGAACTTCTAAGATTGAGCAGCTCTGCCTACAAGTTCTTTCAATGCGTATCTGTCCTGGAGGTGCTACTATTGATTTACCGGTTATTGATAGTTCATCTGCAAATGCTGAGGAGACCAATCAGTTGAATGTGAAGAGTAGTCCTGCTGCTGCTTCAGCTATACCAGATACAGACCTGGCAGAAATTGTTAAGGTGATAGGATCATGCCGTGATGGTATCAATAAGCTGGTTGAGTCACTGCATCAGAAATTCCCGAATGTGTCAAAGTCACAACTGAAAAATAAAGTGAGGGAGATTTCTGAATTTGTTGATAATCGTTGGCAGGTCAAGAAAGAGGTTCTTAGCAAGCTAGGCTTAAGTTCATCTCCTGCGAGTTCCAAAAAGCCCAAGAGCATAGCGACATACTTCTCCAAGCGGTGTCTACCTCCGGAGGAGGCCATCCTGGCTTCACCTGAGCTGCGCCTGAAGTCGAAAACCACTCAAAACGTCAATGGTGACACTGATATTCCTCGAATCAATCTGCTCCCCTCGTCCCAGTAG</cdnaseq> |
| Protein Sequence |
<aaseq>MEGGKLLGVAHPEPANNIDAELRYDLGQSRMQVDGPVVLNRSAELEPSDSMAIDDVPVEASSQPAPAKQSPALMDTIVEVQKQLKRKRASSGPALAAADKDALVAGCCQELEGLLEYYREVSGHRMQFEVGNLSTNAAIGCLLEESSLGLSKLVDEIYEKLKGMEGVSATSVRSSVLLIGQRMMYGQSSPDADVLEDESETALWCWEVRDLKVIPLRMRGPLSTRRTARKKIHERITAIYSTLSVLEAPGAEAQVNDMRKASLKLSKALNLEGIKSLVERATQKSNIERRAKNTGSTAKEPMQEMVKSNNDTGIIENVDDSQLQKNTSTNEKDTQKAQKQVEKELKQKEKEEARMRKQQKKQQEEALREQKRREKEEAEMKKQQRKQEEEAQKEQKRREKEEAETRKQQKKQQEEAEKEQKRREKEAVQLKKQLAIQKQASMMERFFKNKKNSEKLEKSGGKDSGVQTTDPCTTNKEVVPLVTSIIDSSFSQKENWALEDLRRLQISGWQKLSSYNRSSRWGIRNKPKKEAFKELKLQKTSDNMLEEILSPNEDTCHNLSQENEPDKSANDVDMLPAVELQFHGTNHANPLPTRSIKRKLLQFDKSNRPAYYGTWRKKSAVVGPRCPLKMDPDLDYEVDSDDEWEEEDPGESLSDCEKDNDEVMEEDSKITDEESEDSFFVPDGYLSDNEGIQIESLLDDKDEASSSPPDQCAEVEEFRALLRQQKVLNTLTEQALRKSQPLVISNLTHEKAELLTAGDLKGTSKIEQLCLQVLSMRICPGGATIDLPVIDSSSANAEETNQLNVKSSPAAASAIPDTDLAEIVKVIGSCRDGINKLVESLHQKFPNVSKSQLKNKVREISEFVDNRWQVKKEVLSKLGLSSSPASSKKPKSIATYFSKRCLPPEEAILASPELRLKSKTTQNVNGDTDIPRINLLPSSQ</aaseq> |
| Gene Sequence |
<dnaseqindica>1..621#719..818#1124..1268#1947..2070#2522..3039#3190..3537#3636..3717#3788..3919#4388..4786#4869..5006#5142..5187#5279..5448#ATGGAAGGCGGCAAGCTTCTTGGCGTTGCTCACCCTGAACCTGCTAATAATATCGATGCTGAGCTGCGCTATGATTTAGGACAGTCGCGAATGCAAGTAGATGGACCTGTTGTTCTCAACCGATCTGCCGAGCTCGAGCCCAGCGATTCGATGGCCATTGATGATGTCCCAGTTGAGGCATCAAGCCAACCTGCGCCGGCGAAGCAGTCTCCTGCGCTGATGGATACCATCGTGGAAGTGCAGAAGCAGCTGAAGAGGAAGAGGGCTTCCAGTGGCCCGGCGCTTGCTGCAGCAGACAAGGATGCTCTAGTTGCTGGATGTTGCCAGGAGCTCGAGGGCTTATTGGAGTATTACAGGGAGGTTTCGGGTCACAGGATGCAATTCGAAGTTGGGAACCTGTCGACGAATGCTGCTATCGGATGCTTGCTAGAGGAGAGCAGTCTTGGATTGTCCAAGTTGGTGGATGAGATATATGAAAAGCTGAAGGGAATGGAAGGCGTGTCGGCGACTTCGGTCCGGAGTTCTGTGCTGCTCATTGGGCAGAGGATGATGTATGGGCAATCTAGTCCGGATGCTGATGTGTTGGAAGATGAATCAGAGACGGCTCTTTGGTGCTGGGAGGTAAATTTTGTGTTGCTTGATCAGTTGATGGCTTGATGCACGCAATTATGTGTTTATATGTGTTGTGGTGGCTTAGTTGGTTTTTGTCCATTGACAGGTGAGAGATTTGAAGGTGATTCCTCTGAGAATGCGTGGACCTCTGAGTACGCGTAGAACTGCTAGAAAGAAAATCCACGAGAGGATTACTGCTATTTATTGTAAGCCAGACCTTCTTAAGTCCACTTCCATTTCTCAATACGTGGTGGTAGTTTTATAAGAAATTAGCACGTTCTAGCGTAATTGCGTGGGGGCAATTATTGTTCCAAGTTAGAACTGCATTTACTAAATAATTAGTATTGTGTTTATTTCTGGAAAGGCAATCACATTTCTTATATAGTTGTAGGAGTGCTCCAGTTTATTTTATTTTGATCTAATTTCCATATCGGCTTTACCATGAAAATCTACTTATCCAGTACTCCATATCTTTCCTTTTCTGCTCACTAAATAACTGCACCGATTGCAGCAACGTTATCAGTTCTAGAAGCTCCGGGAGCTGAAGCTCAAGTAAATGATATGAGGAAAGCATCACTGAAGTTAAGCAAAGCACTGAACCTGGAAGGTATTAAATCATTGGTGGAAAGAGCGACACAAAAGAGCAACATTGAACGGTTTGTACCTTCTCGTTAGAGTAAAGTGTACGGGCGGTCCTTAAACTTGTAGGAGTGTGTCATCTAGGTCCCTAAACTCTCAAAATATATATCCAAGTCCTAGAACTTGTCATAGTATGTCATCTAGGTCCCAAATCGTCACAACCACTTCAGGATCATACATGGCGTTGATGTGGCATGCCACACAGACATGACGTGGCATTGTTTTGACTGACAAATAGGACCCATTTAAATTTTTTGCTTTTTCTTTTTTCTTCTCTTTTTCCCCTTTATTCTCCTTTCTTTGTGACCTGAGCAGAAGAAAGGAAAAAAAGAAGAATAAGAAGAAAACGGAAAAGAAAAAGAAAAAGAAAGAAGAAAAAAAAGAAAAGGACATGTCATGTCCATGTGGCATGCCATATCAGCGCCACGTAGGATCCTAGAGGTGATGTGTTGATTTGGGACCTAGATGATACACTTTGACAAGTTCTGGGACCTGGATATGCATTTTGAGAGTTTAGGGACCTATATGACACAACCCTACAAGATTAAGGACCGCTAATACACTTTACTCTTCTCGTTATTACTTTCTGTCCAAGGATTTTCTTGCACATTTTTTATGAGACAGGTGCACACATGATTTTAATCTTCAATCTTTTAGCACTCTGATTTATATATTATATTTTCTTGACAAAACAGGCGTGCCAAAAATACTGGATCAACAGCTAAAGAGCCAATGCAAGAGATGGTGAAAAGCAATAACGATACTGGGATTATTGAGAATGTGGATGACTCTCAGCTGCAAAAAAACACCTCAACTAATGTCAGTATTTCTTCCTGTTTTGTTCTTGAAATGGTCACATGCAAATCTGTTAATGTCAAATTTATTAGAGGATCACATGTATTTGACCAACAATAATTTGGTATATGTTCTGTTGCATATTAGAGCTAAAGTTCTGGACATGACTTCACTTCTTTGAACTATCAACGGCTGACTGTAACAAAAAGCACACAGCTGAACTTACATTATACTACAGTTTATTCTTAAGCAAAGCCACTTGAAATAAGTACTCCCATTTACAATAGGCATGTTGAGCTTGGTGTTGTGGTCTTGAAGTCTTGCTATTTGAGCTACATGTAATTATTCCAAGGATATACTGTTCACTAGCATGGTTTATTAATTTGTTTTGGGGCACAGTGCAATGTGATGCAACAGTAGTTTCGCAAGGAAATTACATATGTTTATCCACTAATGCTATACTGCTGAATTTTAGGAAAAAGATACTCAGAAAGCACAGAAACAAGTTGAAAAGGAGCTAAAACAGAAGGAGAAAGAAGAAGCTCGAATGAGAAAACAACAAAAGAAACAGCAAGAAGAGGCGCTGAGAGAACAGAAACGACGTGAAAAGGAAGAAGCTGAAATGAAGAAACAGCAAAGGAAGCAGGAAGAGGAAGCACAGAAAGAACAGAAGCGCCGTGAAAAGGAAGAAGCTGAAACGAGGAAGCAACAAAAGAAGCAGCAAGAGGAAGCTGAGAAAGAACAGAAGCGCCGTGAGAAGGAAGCTGTCCAACTCAAGAAGCAACTGGCCATTCAGAAGCAAGCTTCTATGATGGAACGGTTTTTCAAAAATAAGAAAAACAGTGAAAAGCTTGAGAAATCTGGAGGAAAGGACTCAGGCGTTCAAACTACTGATCCATGCACCACCAACAAAGAGGTGGTACCATTGGTTACATCCATAATTGATTCTTCATTCTCTCAAAAAGAAAACTGGGCTTTGGAGGATCTTCGCAGGTTAATTTCCTTCTGATGTCAATATGTTTCATATATATGCGCCTAATTGTTACCTCATACTTGAGGCTTTACCAGAAAAAAAAATCATTTACATTCATATATTGTTTTAAGATATGCCAATGCATCACATTTAATAGAAATATGTAACAGATTGCAGATCAGTGGTTGGCAGAAGTTATCTAGCTATAACAGGTCCTCCAGGTGGGGGATCAGAAACAAACCCAAGAAAGAAGCTTTTAAGGAGCTCAAACTTCAAAAAACCTCTGATAACATGCTTGAGGAAATTCTTTCTCCTAATGAAGATACCTGCCACAATTTAAGTCAGGAAAATGAGCCAGATAAGTCAGCAAATGATGTTGATATGCTACCAGCGGTTGAGCTACAGTTTCATGGCACCAATCATGCTAATCCTCTGCCAACTAGATCAATAAAGCGGAAGCTTTTGCAATTTGACAAAAGCAACAGACCTGCATATTATGGGACTTGGAGGAAGAAAAGGTTAGTATTTAATTTGAATACCATGTTCTTAATACTTTCCAACCTCCTGTTTTGAATGCCATGTTTCTTAATGCTTTCCATTCTGTAATCCTTTCCAGTGCTGTTGTTGGCCCAAGATGTCCACTTAAGATGGATCCTGATCTTGACTATGAGGTTGATAGTGATGATGAATGGGAAGAGGTAATTGGTGATTTTGCTCCTTTATTCTCTTTCTTTCTGGCAAGAGGTACTCATGTTGTTTGGCGCACAGGAGGATCCTGGTGAGAGCCTTTCCGACTGCGAGAAGGACAATGATGAAGTTATGGAGGAGGATTCCAAGATCACAGATGAAGAGAGCGAAGATAGCTTTTTTGTCCCCGATGGTTACCTCTCGGATAATGAGGTAAGTCATTAATAAGTGAATTCTTTACCAGTTTACGATATAAATAGAACTTTTAAGTTTGTCTTTTTGTGTAAATGTACATCTCTAAGATGCTTCCATTTAGTTATTGTAACTAACAATCCGTTCTGTTGTGAGAGTGGTGTGCTATTTGTTTCTCTGTACCTGCTGAAAGGATGATAGAAATGATACTTGTGCATACTTAAATCTTCGTTGAATTTATAAGAAAATAAAATTGTGGAACAAGACAAATCCTTGTATGAATATGTATGCTGATATGAGCTACGTCTTCTACTTTTTCCGTATATGAATATGTATGAGTTCTAGGTTGTGATACACTTTCAGTTCTGCTCTACATACATGCGAGATCAATAGTTGTTTCATTGACTAAGGCCCTATTTGGAAAGGATGGGATAAAATCCTAAGGACTAGGTTCAAATCAATTCAACATTTGGAGTTCCTTTATTGCAGGGGATTCAGATTGAAAGCCTCTTGGACGACAAGGATGAAGCCAGTAGCTCACCACCAGACCAGTGTGCAGAAGTAGAGGAATTTAGGGCTCTACTACGCCAGCAAAAAGTACTAAACACTTTGACTGAGCAGGCTCTCCGCAAGAGCCAACCTCTAGTGATATCAAACTTAACTCATGAAAAAGCTGAATTATTGACTGCCGGAGACCTCAAGGGAACTTCTAAGATTGAGCAGCTCTGCCTACAAGTTCTTTCAATGCGTATCTGTCCTGGAGGTGCTACTATTGATTTACCGGTTATTGATAGTTCATCTGCAAATGCTGAGGAGACCAATCAGTTGAATGTGAAGAGTAGTCCTGCTGCTGCTTCAGCTATACCAGATACAGACCTGGCAGAAATTGTAAGTAATCACTTAGTATTCAATGGTAATGTGTTGATTGGATATGCCATTTTCTTATACATATTGTTCAATTCCAATGCAGGTTAAGGTGATAGGATCATGCCGTGATGGTATCAATAAGCTGGTTGAGTCACTGCATCAGAAATTCCCGAATGTGTCAAAGTCACAACTGAAAAATAAAGTGAGGGAGATTTCTGAATTTGTTGATAATCGTTGGCAGGTAAGATATTTTCACATTCAAGAACGCCATACCAACAATGTTTGCTTTTGTGCTAGTGTTATTTACAGCAGCGCATTATGAGAGATGAAATATACTTGGAATGCTCTATTAAGTTATTTTTTCTTATCTCTGCAGGTCAAGAAAGAGGTTCTTAGCAAGCTAGGCTTAAGTTCATCTCCTGGTACTGTACCTCATATTCATTTGTCAGTAGGAATCTTGCCCCCATTGTCATCTTCTGAAACCCTTCTAACAATAAGTCTTGTTTTTTTCAGCGAGTTCCAAAAAGCCCAAGAGCATAGCGACATACTTCTCCAAGCGGTGTCTACCTCCGGAGGAGGCCATCCTGGCTTCACCTGAGCTGCGCCTGAAGTCGAAAACCACTCAAAACGTCAATGGTGACACTGATATTCCTCGAATCAATCTGCTCCCCTCGTCCCAGTAG</dnaseqindica> 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| External Link(s) |
