Difference between revisions of "BGIOSGA020573"

From RiceWiki
Jump to: navigation, search
(Created page with "{{IndicaGene| GeneName = BGIOSGA020573| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020573, complete gene.| tag = P0018H0...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA020573|
 
GeneName = BGIOSGA020573|

Revision as of 16:31, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA020573

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020573, complete gene.

LocusTag

P0018H04.3

Ensembl Transcript ID

BGIOSGA020573-TA

Ensembl Protein ID

BGIOSGA020573-PA

Length

3968

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31617072..31621039

Sequence Coding Region

31620317..31621039,31619533..31619745,31619217..31619421,31619022..31619097,31618778..31618913
,31618562..31618666,31618380..31618457,31617994..31618083,31617841..31617906
,31617548..31617604,31617382..31617459,31617255..31617302,31617072..31617143

Genome Context

<gbrowseImage1> name=IndicaChromosome06:31617072..31621039 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:31617072..31621039 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCCGCCATCGTGGCCGCGCGGGCGCCTCCGGGCGGCGGCGGCGCCGCAGCCGTCATCGCGTACCACCACTGCGCGTCCCCCTCGCGGGCGCTCCCGCTGGCGGCCGGCCCGTCCGCGGGAGGAGGGGTGGTGGTGGGGAGGAGATACCACCACCACGGCGGCGCGTGCTGCTTCGCCGCAAAGCCCACGCAGGTGGCCGCCGAGGTGGATCAGGGAGGGGCGGCCGAGCCGGGTGTCGCTTCCGCCAATGCTGCGGTGGAGGCGAAGCCGCGTAAGAAGGCGCGATCCCGGCGAGGAAGGAAGGGGAAAAGGTCGTCGTCGTCGGAGACCAGGACGACGGCGGTGCTCGAGGAGGAGGAGGAGGTGGAGGTGAAGGAGAAGAAGACGGAGGAGGATGGAGAGGAGGGGAAGAGGAAGGAGAAGGCGGCGGGGCTTGACCTGGACGAGGTGATGGCGGTGAGCCCCGTGGGGCTAGGGCGGCGGTCGCGGCAGATATTCGACGAGGTGTGGCGCAAGTTCTCGCGGCTGGGGCAGATGTCGAGCGCGTCGTCGACGGCGCTGGCGGAGGAGGAGCAGGCCGTGCTCATCCGCGGCGGACCCATGTGCGAGTTCACCGTCCCCGGCGCGCAGGACACCACCGTCCTCGTCGTCGGCGCCACCAGCCGCATCGGCCGCATCGTCGTCCGCAAGCTCATGCTCCGCGGGTACAATGTCAAGGCTTTAGTTAGAAGGAATGATGCTGAAGTGATAGATATGCTCCCAAGGTCGGTGGATATTGTTGTCGGTGATGTTGGTGATCCTTCAACTGTCAAATCGGCTGTATCAGGTTGCAGCAAGATAATCTATTGCGCAACTGCACGCTCAACTATTACTGGAGACCTAAATAGGGTTGATAATCAAGGAGTAAGGAATGTTAGTAAGGCTTTCCAGGATTACTACAATGAATTGGCTCAGCTTAGGGCTGGTAAAAGCAGCAAGAGCAAACTCCTGATAGCAAAATTTAAATCTCCCAAGTCTCTGAATGGTTGGGAGGTGGACCAGGGATCTTATTTTCCAAACACATTTGCTTCTAGGTTTGATGAAGGTATCGATGCATCATTTGACTTTTCAGAGGCTGGTCAAGCTGTTTTCTCAGGATTTGTTTTCACAAGAGGTGGATATGTTGAGATATCAAAAAGGCTATCTCTTCCTTTGGGATCTACTCTAGACAGGTATGATGGCTTACTTTTTTCGGTGGGAGGAAATGGAAGATCATATGTTGTTATTCTTGAGACTGGTCCGCTGGCTGACACCTCCCAGAGCAAGAAGTACTTTGCTCGGATGACTACAAAAGTAGGATTTTGTAGGGTGAGGGTACCATTTTCAGCTTTTCGGCCAGTAAACCCTCAAGATCCTCCCCTAGACCCTTTTCTTGTGCATACACTAACAATTAGGTTTGAACCCAAAAGACAGAGACCTGGTGATGGATCTCAAAGTGCTACTGACCCCAGAAATTTTGAGCTTATATTGGAATACATCAAAGCTTTGCCTACTGGTCAAGAAACAGACTTCATTCTGGTCTCATGCTCAGGTTCTGGGATTGAACCTAACAGAAGAGAACAAGTCCTCAAAGCAAAAAAGGCTGGAGAGGATGCATTGAGAAGGTCAGGCCTTGGATACACAATAGTACGCCCTGGTCCACTGCAGGAAGAACCTGGTGGTCAGCGTGCATTGATCTTTGATCAAGGGAACAGAATCTCGCAGGGTATCAGTTGCGCCGATGTAGCAGATATTTGTGTCAAAGCATTGCATGATTCCACTGCTAGGAACAAAAGTTTTGATGTATGCTACGAGTATGTAGCTGAGCAAGGGAATGAGCTATATGAACTTGTGGCCCATTTACCAGATAAAGCTAACAACTATCTTACACCGGCATTATCTGTTCTAGAGAAGAACACCTGA</cdnaseq>

Protein Sequence

<aaseq>MAAAIVAARAPPGGGGAAAVIAYHHCASPSRALPLAAGPSAGGGVVVGRRYHHHGGACCFAAKPTQVAAEVDQGGAAEPGVASANAAVEAKPRKKARSRRGRKGKRSSSSETRTTAVLEEEEEVEVKEKKTEEDGEEGKRKEKAAGLDLDEVMAVSPVGLGRRSRQIFDEVWRKFSRLGQMSSASSTALAEEEQAVLIRGGPMCEFTVPGAQDTTVLVVGATSRIGRIVVRKLMLRGYNVKALVRRNDAEVIDMLPRSVDIVVGDVGDPSTVKSAVSGCSKIIYCATARSTITGDLNRVDNQGVRNVSKAFQDYYNELAQLRAGKSSKSKLLIAKFKSPKSLNGWEVDQGSYFPNTFASRFDEGIDASFDFSEAGQAVFSGFVFTRGGYVEISKRLSLPLGSTLDRYDGLLFSVGGNGRSYVVILETGPLADTSQSKKYFARMTTKVGFCRVRVPFSAFRPVNPQDPPLDPFLVHTLTIRFEPKRQRPGDGSQSATDPRNFELILEYIKALPTGQETDFILVSCSGSGIEPNRREQVLKAKKAGEDALRRSGLGYTIVRPGPLQEEPGGQRALIFDQGNRISQGISCADVADICVKALHDSTARNKSFDVCYEYVAEQGNELYELVAHLPDKANNYLTPALSVLEKNT</aaseq>

Gene Sequence

<dnaseqindica>1..723#1295..1507#1619..1823#1943..2018#2127..2262#2374..2478#2583..2660#2957..3046#3134..3199#3436..3492#3581..3658#3738..3785#3897..3968#ATGGCCGCCGCCATCGTGGCCGCGCGGGCGCCTCCGGGCGGCGGCGGCGCCGCAGCCGTCATCGCGTACCACCACTGCGCGTCCCCCTCGCGGGCGCTCCCGCTGGCGGCCGGCCCGTCCGCGGGAGGAGGGGTGGTGGTGGGGAGGAGATACCACCACCACGGCGGCGCGTGCTGCTTCGCCGCAAAGCCCACGCAGGTGGCCGCCGAGGTGGATCAGGGAGGGGCGGCCGAGCCGGGTGTCGCTTCCGCCAATGCTGCGGTGGAGGCGAAGCCGCGTAAGAAGGCGCGATCCCGGCGAGGAAGGAAGGGGAAAAGGTCGTCGTCGTCGGAGACCAGGACGACGGCGGTGCTCGAGGAGGAGGAGGAGGTGGAGGTGAAGGAGAAGAAGACGGAGGAGGATGGAGAGGAGGGGAAGAGGAAGGAGAAGGCGGCGGGGCTTGACCTGGACGAGGTGATGGCGGTGAGCCCCGTGGGGCTAGGGCGGCGGTCGCGGCAGATATTCGACGAGGTGTGGCGCAAGTTCTCGCGGCTGGGGCAGATGTCGAGCGCGTCGTCGACGGCGCTGGCGGAGGAGGAGCAGGCCGTGCTCATCCGCGGCGGACCCATGTGCGAGTTCACCGTCCCCGGCGCGCAGGACACCACCGTCCTCGTCGTCGGCGCCACCAGCCGCATCGGCCGCATCGTCGTCCGCAAGCTCATGCTCCGCGGGTACAATGTCAAGGTCAGCTATATCTAATCTATACTCCCCTGCTAATTATACTAGTTCCAGTTCAAATAATATATCTGAACTGATCTGATCTTACTGACAAATGAACATTCCAAGGGACTGGTTGAGAGTGTGATTTAAGAATTTAACATGATCTGTGATGTTTCATATCATCAATGTCTCTGTCTAGAATCCAGATTGTTTCCTTCCATGTATGCAACTTCAAAACTGTTGCTATACTGAAAAGTGATAATTGATGGCTTTGAACTATAGTTCCTGATATCTTCATCTAGTTGGTTCTAGATATGTGTGTGCATTTAGTTGTCTGCTTCATCCCCATTTGCTGAATTCTCCAGGATTTAAGGTCTGTGTTGAATATGACAAAGTATGCAACGTGTAATATGCATACGAACTCGGTACTCCCTAACAATGAACATGGAGAAACAAAGAGTGATCAATAGCAAAATTGGAAAACATTTCGATGTTGGAAATGGACAGTGAACAGTAATGTTTCTGAAAATTTGCAAATTATTTACAGATGGTGGTTATCTGATCTGTTCGTACCATGGTTTTAACATTATAACAGGCTTTAGTTAGAAGGAATGATGCTGAAGTGATAGATATGCTCCCAAGGTCGGTGGATATTGTTGTCGGTGATGTTGGTGATCCTTCAACTGTCAAATCGGCTGTATCAGGTTGCAGCAAGATAATCTATTGCGCAACTGCACGCTCAACTATTACTGGAGACCTAAATAGGGTTGATAATCAAGGAGTAAGGAATGTTAGTAAGGCTTTCCAGGTATTCCTTATGACCTCAATTTATCATCTTACCGGTAGTAATGTTATTGATTTTGAGAGTATTCTTGCCTCATTGAAAATTTCTTTAACTCAGCTCTGCATTACGCTGCAGGATTACTACAATGAATTGGCTCAGCTTAGGGCTGGTAAAAGCAGCAAGAGCAAACTCCTGATAGCAAAATTTAAATCTCCCAAGTCTCTGAATGGTTGGGAGGTGGACCAGGGATCTTATTTTCCAAACACATTTGCTTCTAGGTTTGATGAAGGTATCGATGCATCATTTGACTTTTCAGAGGCTGGTCAAGCTGTTTTCTCAGGTATCACCTTCTGCTATGTAGATTTAGGACTTTCTTCTCTGCAAATGCACTAAGTTTGAGTTGCCTACACGTGCTGATTTCATTTCCATGTCAATTCTTACGAAACAACCTTTAATCAGGATTTGTTTTCACAAGAGGTGGATATGTTGAGATATCAAAAAGGCTATCTCTTCCTTTGGGATCTACTCTAGACAGGTATGATAAGATTTGTATATTTTACTAAGAAGATTCTTTGATTTTATTTTCGTATATTATACATCAGACTGAAAACTTTGGCATGTTATTCTTTCACTGTATACAAAGGTATGATGGCTTACTTTTTTCGGTGGGAGGAAATGGAAGATCATATGTTGTTATTCTTGAGACTGGTCCGCTGGCTGACACCTCCCAGAGCAAGAAGTACTTTGCTCGGATGACTACAAAAGTAGGATTTTGTAGGGTAAGTTGTGTTCAATAACCAAGCTGTATGATCAGATGCTTGTGCTTCCATCTAAGAAATCAAAGAATTCAGGAATTGACCATTTCTTTTGCCTTCTCTGTTTTTCTGCAGGTGAGGGTACCATTTTCAGCTTTTCGGCCAGTAAACCCTCAAGATCCTCCCCTAGACCCTTTTCTTGTGCATACACTAACAATTAGGTTTGAACCCAAAAGACAGGTTAGTACAATACAATGAATTTATTTGAAATGTTACCTTAAGGTAATAAATGTAGAGATGATTAAACATGAAATTGGTGGCTCAGCTTTTAATGTATTCTGCAGAGACCTGGTGATGGATCTCAAAGTGCTACTGACCCCAGAAATTTTGAGCTTATATTGGAATACATCAAAGCTTTGCCTGTAAGTTGTTCCTAGTTTGATTGTCTGTGGCATGCTTCGCTACTTTCATTTCCTTCCCTGTTTAATTCTTGTTGTGTCCAACTCTTCTTTTAATTTAAATACCTTCAACATTCCCACTGATTATTTTGGTAGGAAACATGACCTCTTTTTTTTTGTCAGAATTGAAAAGGCAATTCAATTAGGTTATAAAAGCATCTCTTTATTTCTTTTGCAGACTGGTCAAGAATTTTTGTCAGAATTGAGAAGGCAATTCAATTAGGTTATGTTTAAAAAGCATCTCTTTATTTCTTTTGCAGACTGGTCAAGAAACAGACTTCATTCTGGTCTCATGCTCAGGTTCTGGGATTGAACCTAACAGAAGAGAACAAGTCCTCAAAGCAAAAAAGGTTTTAATTTTAATAACCATTTAAAATGCTTACACTTCTCTAATTCAAATGTTCATCAAATTATTAAGGACCTTTGAACATTTCTAGGCTGGAGAGGATGCATTGAGAAGGTCAGGCCTTGGATACACAATAGTACGCCCTGGTCCACTGCAGGTATGGTGTATTGATAGACCTCCTGACAGAAATGCTTCACTTTGAGCTCATAAGTTTACATTCTGCTTTCAGATTATTTATTAAGCTAATAGCACTCCACTTCCATTCTATGTTCAATAATCATTAGAACATAATGTGTTAGTAGAAGATATTAATTAGAGATCAGTATTTGCAGACTGCTGTATACATATCATTAAAACCAGTTTCATCATGATCACTCAACCTTTTTTTTCCAGGAAGAACCTGGTGGTCAGCGTGCATTGATCTTTGATCAAGGGAACAGAATCTCGCAGGTGAACCTTCATAAACTATAGGAGTCTGCTTTTCCCATAATATGTTGATAGCATCATACATAAATAACTGATCTTTCTTGTAATATAGGGTATCAGTTGCGCCGATGTAGCAGATATTTGTGTCAAAGCATTGCATGATTCCACTGCTAGGAACAAAAGTTTTGATGTAAGCAACTTTCTTCCACTTTCTTCTGTATAGGATGATCAGTGTTGCAATACTAACTTGTTATTGCCTACTCACTTAGGTATGCTACGAGTATGTAGCTGAGCAAGGGAATGAGCTATATGAACTTGTGAGTATTTCTGAATCCACAACTGATGGAACTCTTAAATCTTAATCTCCTTTCTCCAATTGAGAGTTGCACTCCCAATTCTAATTTATTTTGTACTGAATGTTTCTGCAGGTGGCCCATTTACCAGATAAAGCTAACAACTATCTTACACCGGCATTATCTGTTCTAGAGAAGAACACCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020573