Difference between revisions of "BGIOSGA020824"

From RiceWiki
Jump to: navigation, search
(Created page with "{{IndicaGene| GeneName = BGIOSGA020824| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020824, complete gene.| tag = OSJNBA0...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA020824|
 
GeneName = BGIOSGA020824|

Revision as of 16:33, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA020824

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020824, complete gene.

LocusTag

OSJNBA0019I19.10

Ensembl Transcript ID

BGIOSGA020824-TA

Ensembl Protein ID

BGIOSGA020824-PA

Length

3796

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:26951925..26955720

Sequence Coding Region

26955134..26955720,26953284..26953566,26952403..26952498,26951925..26952314

Genome Context

<gbrowseImage1> name=IndicaChromosome06:26951925..26955720 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:26951925..26955720 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCCGGGGACGCCGCCAGGGCGCCGCCGGCCGCGGAGGCGCAGTCGCTGGTGGAGTCCTTCTGCGGCGTCACCTCCGCGACGCCCCAGGAGGCCGCCTTCTTCCTCGAGAGCCACAACTGGGCCCTCGAGTCCGCCGTCCGCTCCTTCTACGACTCCGCCGACGGCGACGCCTCCGCCGCCGCCGCCGACGCGGCCGATCCGCCCCCCCGCCAGCCCCCGCCTCCCCCGCCCGCCAGCGATGGCGCCGACTCCGACGACGAGGACTACGTCGTCGGCGGCGGCGACGAGGATCAGGACGACGAGGACTACGTCGGGGATGGGGATGGGGACGGGGAGGGGGACGATGATGACGACGAGGACGCCGCCCTCGCCGCGGAGGAGGCTGCGGCGTCGGACGAGCGGAGGAGGCCGCTGAAGAGGCTGAAGAGGGGCCAAAACGCGCGTGGCGGGAGCGGCAGCGGGAAGGGGAATGTGCGGACGCTCTCCGATCTCGGCGGTGGCAAGGACAGCGCGGGGTCCGAGGACTCGGAGGACGACGAGTATAAGCCGCCGCAGGAATTATACACCGGAGGCGAAAAGAGTGGAATGGTCGTTAGAGATCGATCTAAGCGTAAAAACCGTGCGGATGAGATCTTTAAGGAAGCTAAGAGGAAGGGAGCAAAGAAAGGTTCATTTGAGGCTCGCCGGAAATCAAAGAGCTTTGCTGGGACAGGCAGACTTCTAACAGGTGAATCTGCAGAGCCTGTTGCGCCTCAGTCACCAGAAAGTATTGTCCACAACATCTATTTTTGGACCAATGGGTTCACAGTAAATGATGGTCCACTTAGAAGTTTTGATGATCCAGCAAATGCTTCCTTTTTAAAGAGCATCAAGAATTCTGAATGCCCATCTGAGCTTGAGCCAGCTGATAAGAAGTCTCAGGTGAATGTGAATCTTGTTCGGAAAGAGGAAAAGTGTCCTGAACCTGTCAAGCGCGCAGCTCCATTCCATGGAGCGGCAAAAACTCTGGGGACGCCTTCTGATAATAACTCCACACCTCCGGAGGCTACTTCTGCAGCAGCCGCTGCTTCCAGCACAGAGACCGCCTCCAAGACCGTGACGATCACAGTGGATGATTCTTTGCCATCGACCTCTCTGCAGATCAGGTTCGTGGACGGCAGCCGCATGGTCGCGCGTTTCAACACGAGCCACACGATCGCGGATGTGCGGGTGTTCATCGACACAACAAGGCCAGGAGAAGCCGGTGATTACACGCTCCAGGCCGGGTTCCCCCCAAAGCCGCTCGATGACATGAGCAAGACTATCGAGGAAGCTGGCGTCGCCAACTCGGTAATCATTCAGACAGCGTAG</cdnaseq>

Protein Sequence

<aaseq>MAAGDAARAPPAAEAQSLVESFCGVTSATPQEAAFFLESHNWALESAVRSFYDSADGDASAAAADAADPPPRQPPPPPPASDGADSDDEDYVVGGGDEDQDDEDYVGDGDGDGEGDDDDDEDAALAAEEAAASDERRRPLKRLKRGQNARGGSGSGKGNVRTLSDLGGGKDSAGSEDSEDDEYKPPQELYTGGEKSGMVVRDRSKRKNRADEIFKEAKRKGAKKGSFEARRKSKSFAGTGRLLTGESAEPVAPQSPESIVHNIYFWTNGFTVNDGPLRSFDDPANASFLKSIKNSECPSELEPADKKSQVNVNLVRKEEKCPEPVKRAAPFHGAAKTLGTPSDNNSTPPEATSAAAAASSTETASKTVTITVDDSLPSTSLQIRFVDGSRMVARFNTSHTIADVRVFIDTTRPGEAGDYTLQAGFPPKPLDDMSKTIEEAGVANSVIIQTA</aaseq>

Gene Sequence

<dnaseqindica>1..587#2155..2437#3223..3318#3407..3796#ATGGCCGCCGGGGACGCCGCCAGGGCGCCGCCGGCCGCGGAGGCGCAGTCGCTGGTGGAGTCCTTCTGCGGCGTCACCTCCGCGACGCCCCAGGAGGCCGCCTTCTTCCTCGAGAGCCACAACTGGGCCCTCGAGTCCGCCGTCCGCTCCTTCTACGACTCCGCCGACGGCGACGCCTCCGCCGCCGCCGCCGACGCGGCCGATCCGCCCCCCCGCCAGCCCCCGCCTCCCCCGCCCGCCAGCGATGGCGCCGACTCCGACGACGAGGACTACGTCGTCGGCGGCGGCGACGAGGATCAGGACGACGAGGACTACGTCGGGGATGGGGATGGGGACGGGGAGGGGGACGATGATGACGACGAGGACGCCGCCCTCGCCGCGGAGGAGGCTGCGGCGTCGGACGAGCGGAGGAGGCCGCTGAAGAGGCTGAAGAGGGGCCAAAACGCGCGTGGCGGGAGCGGCAGCGGGAAGGGGAATGTGCGGACGCTCTCCGATCTCGGCGGTGGCAAGGACAGCGCGGGGTCCGAGGACTCGGAGGACGACGAGTATAAGCCGCCGCAGGAATTATACACCGGAGGCGAAAAGAGGTGAGCTCTACTCGCCTTGTATCTTAGGGTTCTTCGATTTCATTTCTAGCTAGATTGGTTTTTGGATGAACGCATTTGTAGGGTTTTAGGTTGTTTTGCGTAGGGTTTGGCTAGAATTTGTAAGATACTTGTTGGTTTGCATTGAACGAGGTCAGGGGTGCTGGATTGGATGCAACAATTGTCAAATGTGTTCAAAATGATGGGAGCTATCATGCTTCCTGAGTATGAACCGTGCTAAGTCTGCATTATATGCCTAGATGTTGGCCCTTTAGAGTACCTGATTTTTCCCTATTAATAATAATAGCCACAGATTGTTGATCCATGTAATCCTTGTGATAATAATAGTCTTTGTGTAGACTAGGATTTATGATGTTGTGTTGCAACTTAATTTTGGCAGCTCTGCACTTTTAGAGACACATGAGTTGGTTGTGAGTTTAGCCACGTGTAAGGTTCTGTGATGTTCATTTCATTTCTAGCTAGATTATTTTGGGTGAACAAATTTGTAGGGTTTTAGGTTGCTTTACTTAGGCCTTTGCTAAATTTTGTAAGATTGGCTTGCCCGCTGAAGGAGGACAGGGGTGCTGGATTGGATGCAACAATTATCAAATGTGTTTTAAATGATTGAACCTTTCAATATGGAGAGTGCTAATTCTGCATTATATGCCCAGATGTTGGCCCTTGTAGTCCCTGATTTTCCCCTTTGCATTATTAGCCACAAATTGTTGATCTATGTTGCAGTCCTTGTGATAATGATATGGTGTCCTTGTGTAGACCAGGATTTATATGTTATGTTACAATTTATGCTTTGCAACTTGGCATTTCTGGAGCACATGAGTTGATTGTGAACTGTGAGAGAAGTGGTTCATTAATGACCTGTATCTTGAGTTTGTAGTTTGTACTCACATGTGTTGAAAATTTTGAGACTATAGCTCATTCAATGCAGCATCAAAATGCAGTGCTTCACCTTAGCTACTAGTATAGGATATTCACATGGCAAAGGATTAGTTAAATCTGATGGCATCCAACTTAAATGTGACAATTGCAGTTTTCTGGTTTCTAGTTGTAGTTCCAAATCAAATCACGCCTTCTCTTGTTACTCTCTCCATTTAAAATGTTTGTCTGTTTTATTGAGTATATTGTTTTAAAAAAATTGTATATCGAGGAAGACAAAATTGTAGTAATTGTAATGCTTTCACATGTACTCAGTAACTTCTTAGGCTTGGTTCCTCATCTTGGTCTATGTGCATGTCTTAGGCTAACATATACCACAAAATAGATGGAGAATTGTAGAAAACCAATGCCATAGAATTTTCATGTGAAACACAGATACAAGGAACTATGTTTATAGTAAGGAAAGTATATTCTGGAGAGTTTGAAATCCTTGCGTTGTTAATGCCATGATCATAATCAGATCTCTTGACATTGTTAGGGTGGCTAATACCTGCTAATTACTGTTGTTATAAAGCAAAACACATGATCCCCTGTTTGTTAAATTCGTGATAAGCTAGCTGTTTGTTTGAGTTATGAGTGAATTAACATTTCCAACCTACATTTATAACTTGTGCAGTGGAATGGTCGTTAGAGATCGATCTAAGCGTAAAAACCGTGCGGATGAGATCTTTAAGGAAGCTAAGAGGAAGGGAGCAAAGAAAGGTTCATTTGAGGCTCGCCGGAAATCAAAGAGCTTTGCTGGGACAGGCAGACTTCTAACAGGTGAATCTGCAGAGCCTGTTGCGCCTCAGTCACCAGAAAGTATTGTCCACAACATCTATTTTTGGACCAATGGGTTCACAGTAAATGATGGTCCACTTAGAAGTTTTGATGATCCAGCAAATGCTTCCTTTTTAAAGGTAAATACTTTGACCTGTGCAAAATGTGTACCTGTTTTATCTGCTTATTATGTTTGTCTCATGTGCCATTATGTACTTGTACCATTTATTTGTTTTGGAATATCTTAATTCACCTTGTTTCCGACCTAGAGTGGTAGCTGTTGCAATATTTTGTCATCATGATGCACCCTGTTGTGCTTAACGTAATGGCTAGTTAAAATAAATTCCTCATGATGAAAACAGATCACTGGAATGGTCTTCTTTCATTGAGTGTATCCATTGATGTTCTTCAGCTGGCTTCCATCATAGTGTCTCACAACCTTTATCTCATTTTTGGGCTGGTCCTCATCAATTGATGTAGGGCAAGATGTGTTTTGGTAGGAAGGGTTACTGGCCAATCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCAATTTTGCCATTGCAAAACAGAAATCTTTCTGAAAATTTCTGGACCAAGTAAAAATAGTTGGATTTCACATTTCACAGGTAGCTTGTTCAGTAAAACTACCCAAACTAATCTCAACATTAAAAAAATGCACTGAGGCTTTTTTTTGTTGGTAAAATTCGGTTTAGTGTTACCATTTTTCTTTTATGGTTATTCTGTTGCTTGATCTATTTTTTATTTTGATCTTATTCTTAGCACTTTATGTTCAGGTCCTCTGTAACTTGCTATGCATGCCATTTCTTTTGTTTTGTTACATGTTTATGAATTTGGGTTATGTCTTCTCTTGCTAAATGGAATGTGAATTAATCAATCTATTATTTTTCCTTTTTCAATTGCACAGAGCATCAAGAATTCTGAATGCCCATCTGAGCTTGAGCCAGCTGATAAGAAGTCTCAGGTGAATGTGAATCTTGTTCGGAAAGAGGAAAAGTGTCCTGTAAGTTTTGTCAGCCTTTGCTTTACTGTTTCAATTGTTCTAGACGACGATCCCGGCCTTGACAATGTCCATTGCTCGAATGATGTAGGAACCTGTCAAGCGCGCAGCTCCATTCCATGGAGCGGCAAAAACTCTGGGGACGCCTTCTGATAATAACTCCACACCTCCGGAGGCTACTTCTGCAGCAGCCGCTGCTTCCAGCACAGAGACCGCCTCCAAGACCGTGACGATCACAGTGGATGATTCTTTGCCATCGACCTCTCTGCAGATCAGGTTCGTGGACGGCAGCCGCATGGTCGCGCGTTTCAACACGAGCCACACGATCGCGGATGTGCGGGTGTTCATCGACACAACAAGGCCAGGAGAAGCCGGTGATTACACGCTCCAGGCCGGGTTCCCCCCAAAGCCGCTCGATGACATGAGCAAGACTATCGAGGAAGCTGGCGTCGCCAACTCGGTAATCATTCAGACAGCGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020824