Difference between revisions of "Os11g0580800"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os11g0580800| Description = Twin-arginine translocation protein TatB family protein| Version = NM_001074685.1 GI:115486018 GeneID:4350785| Lengt...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os11g0580800|
 
GeneName = Os11g0580800|

Revision as of 21:21, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os11g0580800

Description

Twin-arginine translocation protein TatB family protein

Version

NM_001074685.1 GI:115486018 GeneID:4350785

Length

3034 bp

Definition

Oryza sativa Japonica Group Os11g0580800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:23762848..23765881

Sequence Coding Region

23763084..23763202,23763617..23763745,23764111..23764231,23764301..23764360,23764720..23764841
,23765452..23765644

Expression

GEO Profiles:Os11g0580800

Genome Context

<gbrowseImage1> name=NC_008404:23762848..23765881 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:23762848..23765881 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgtcgctggcctgctactccgacctcctccgtgcgtcgccatgtgcactccttccccttcccctttcccttcctcacagaggaggaggaggaggaggctcacgctcgctcagccctactgcacgctcggcctatccttcgtctccggccgccaccaccgcttcctcctccgccgccgccgccgtacggagagcaaaagaacaagtcgtggaacgggtgtttatgcttctttatttggagttggagctcccgaagctctggtcattggagtggttgctctgttagtctttggtcccaaaggactagcagaggtagccaggaatttggggaagactttgcgtgctttccagccaaccattagagagctacaggatgtttcaagggagttcaggagcactcttgaacgagaaattggacttgatgaagttcccccatcaatgaactacaggcccccgaccatgaataatagtcagcaacctgctattgaccaaagctcggatgataagcctgaggctgcaccttacaccagtgaagaactcatcaaagtaactgaagaacaactagctgcgtctgcagctgctgcttggaatactcaagaacctcctccatcacagcaaaaagaagcagcagctacttctgaaagtaatgacggtgctatatcaagagggagtgatggtgctggtgctgcaatgagtgagcccaatcggaacatttctgagaagacggaaaccgagagatga</cdnaseq>

Protein Sequence

<aaseq>MAVAGLLLRPPPCVAMCTPSPSPFPSSQRRRRRRLTLAQPYCTL GLSFVSGRHHRFLLRRRRRTESKRTSRGTGVYASLFGVGAPEALVIGVVALLVFGPKG LAEVARNLGKTLRAFQPTIRELQDVSREFRSTLEREIGLDEVPPSMNYRPPTMNNSQQ PAIDQSSDDKPEAAPYTSEELIKVTEEQLAASAAAAWNTQEPPPSQQKEAAATSESND GAISRGSDGAGAAMSEPNRNISEKTETER</aaseq>

Gene Sequence

<dnaseqindica>2680..2798#2137..2265#1651..1771#1522..1581#1041..1162#238..430#ctcgctctgcccgctccctctccctctccggcgccgccaccgagcgccgccgcctctgccacccctcgcgccgccacctccgcctcccccttacgccgtccccgttgtcgggcgccgccgcaatatctccctctatcgttcgcctccctcttcttgtgttgtggtggtgcggtgcgacttgcgagtgagctgcatataccctacgaatcgaatcgaattcgaagcccgccgccggcgatggccgtcgctggcctgctactccgacctcctccgtgcgtcgccatgtgcactccttccccttcccctttcccttcctcacagaggaggaggaggaggaggctcacgctcgctcagccctactgcacgctcggcctatccttcgtctccggccgccaccaccgcttcctcctccgccgccgccgccgtacgggtactctcccacaaccaacagacgattcattgattgatttgattgtttggattcatttagtagtagtatctaattaccttttagttgtactccttattctttgtattactatccgtcaaaagtattcatcatatcttggatggaaatagcaactcttgtcacaagctctatacagtgcacaaattgggcggcattcaacattttttgtccttgtgctgctcaggctcagctgctgcccaccataagctcgggaaaatgcctgggatcacctggctgctcgccacttcttccttcgtttccataactaccattcctaacctcatctacaaattttctcttgggctggaattagacgtcaacacactaccatctttgtatgaaaaacaggaaagctaaagactaggaaaggaagagatcaggatttcttatacccatctaatttgtcttcgccgctataactgcccatctaccttcctgctttatatagctggatgaaggatattccctttactatatttactatgcctgtattcgtatcgtgctgttccataattctttgccaaattaggcatctcacagcctttgtgtttctttgacttcttcaatgtagagagcaaaagaacaagtcgtggaacgggtgtttatgcttctttatttggagttggagctcccgaagctctggtcattggagtggttgctctgttagtctttggtcccaaaggactagcagaggtaaactctttcccaacaaacctggacatcatatttttgctgttgtccggcttcctattctagctaattcttcactaaaccctcagcattagcaccatattctaatcgcctatagtttcttaacctgttgcatgtactgccagatcgtggtaggttttctgcaaaggtttgaaagcacacactacatacagaaaagaaaaagccttgcaggaaatattttatgttgttgttttcttcactttaaatatgtcatgttgttgttctgctttattttactgtgaatgaaaatgagcatgtacttcctgccaacctttctatcattacgaactgttaggtctcacttgcttgcttgtatgcaggtagccaggaatttggggaagactttgcgtgctttccagccaaccattagagagctacaggttggtttgtgacttgtctgatgtgattccttgatacatatgtaacgtgtctcttttttccgcatataggatgtttcaagggagttcaggagcactcttgaacgagaaattggacttgatgaagttcccccatcaatgaactacaggcccccgaccatgaataatagtcagcaacctgctattgaccaaagttagttgatttaactgctcctaaagttattcagggggaagtcatacccaattagtttaaagcttgaagtccacattagaaattcattcatgtcagtaaaaaatcataattgcaccttgatacatttgcagtgttctgaccgctgggttgttactggttagctccacttatgtatttaccatttccttccgtcctagactcatatcctgcttgtcattcaatgctgttaaaaactaaggtggcattcaaacaagggtcttgacattttcctagccttgagcaagcacacatttttttccctgtgatttaagcttaagaccgtgaatgtaattctcttgttttttttgttccttgaaacacaaaaggctcggatgataagcctgaggctgcaccttacaccagtgaagaactcatcaaagtaactgaagaacaactagctgcgtctgcagctgctgcttggaatactcaagaacctcctccatcacagcaaaaaggttttgacattttctttgtgccatttcttcaattaggtacacatgttcagtattcataagataaattgtgcagattgtcttatgttgcatgacattttccaactgtgtaaaattctggttcgtctttgccaagttatcaggactctatgctcctgtaagcatgtagtagtcctagaacaaaatggaagcaacactgccagtggcttatgtgagcatgtgttgattgctggggcagttgttaaaggtcctagtgactgcacttgtttttgcactgaatttgtgtaaatcgtaagcctgcttcaggggacactcccttgtatcgtttttacttacgttgtatctgaattctgaaagtaatcgcttacgaatttctggtcaagctaattaacttgattctgctgtgtcatatttcagaagcagcagctacttctgaaagtaatgacggtgctatatcaagagggagtgatggtgctggtgctgcaatgagtgagcccaatcggaacatttctgagaagacggaaaccgagagatgaagcataacgatgtagagtactactgtattaagactgacgcaagaacacgctgtggaggttggaaagagcggattatgatttttaatttggtgagctgggtatgcctgggtttgggtagggaggagtgatttgaggatctggtcagctgtgatgcatatgtgtagtgttgctttgctgtgtagtagatcgactgtaatagaatggacggacagactgaaaggtgatcgtccctctct</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0580800, RefSeq:Os11g0580800