Difference between revisions of "BGIOSGA017900"

From RiceWiki
Jump to: navigation, search
(Created page with "{{IndicaGene| GeneName = BGIOSGA017900| Description = BGIOSGA017900| Definition = Oryza sativa Indica Group BGIOSGA017900, complete gene.| tag = | tid = BGIOSGA017900-TA|...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA017900|
 
GeneName = BGIOSGA017900|

Revision as of 16:17, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA017900

Description

BGIOSGA017900

Definition

Oryza sativa Indica Group BGIOSGA017900, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA017900-TA

Ensembl Protein ID

BGIOSGA017900-PA

Length

2761

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:24239292..24242052

Sequence Coding Region

24240199..24242052,24239292..24239345

Genome Context

<gbrowseImage1> name=IndicaChromosome05:24239292..24242052 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:24239292..24242052 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAGAGGGTTTTACTGCTGACGAAGTTTTCCAAGCTGGAGAACATCTGTTGCTTGTGCCACCAATCAAGCCTAGCTCGTGTTCTAAGAACAAACGAGCTTTTGGAAATGGTTGGCTGGCAAGAAGAATTGTAGACGCAGTGGCAGGACAAACTGTGAGCAAGTGTAAACCATGGAAAGGACCACTGCCTAGTGCCAGGTGTTCGCAACCTTTAACCATTGGTGATAAACTAGCCGAAGCCCTCGCTGCGATGCCCAGACTCCAAGCTCGGCCAGGTTCGAGCAATTGGGCTGCAGGAAAAAGAACGGTGAAAGAAGTAGAGTTGAACTTGGATCAGAGAGCTACGAAGTGCAGAGGAGAGAGGTTCGTAGAGAAGGATTGTAGAGCGGCGGAGAAGGAAGGACATGAGGTGATCCTCGGAAAGGGAGTCGTGCAGCTGGATGTTGGAGAAACCGAGGAATCTGGTCAGCTACCTAATTCAAATTCCAAACGGTTGGAATTGGGCGCACATGTCAGACCCATTTATCTGGGATCAGGGCGGCGACCAATTCGTTTTTATCCTGGAGTGGGCCGTTTGCTTTCGCAGGCTGGGAGGCATCCTCGGGCGTCCAAAGAGATGAAGCCCAGTGGCATACTTGGGAAGGAGAAAAGCACACAGTCTTTACGTCGAGCGGCGGACGCTGGAGTTATTAATTCATTCGCGAGCCATCGCACACTTTCCAAACTGAGAGAAGCTGAACAGGTTACGGGGAGAGAACCAGGGCGAAGGTGCGATCTGGGCGAAGCCATGGCGCAGCATGGTGGCTGGGGTTGGGAGAGAGGTGATGAGTCACAGTGGGAGGATGATGAGAGTTTCTTTCATGGGAGGAGAGAAGGTGATGAGCGGCTCCGTTTCCAGCCGGGCGTAGGGTTTGGGCAGGGGAGTGGAGGAAGAAGCCGGCCGCCGTATGGCTTCAGGTCAAGAGGGACCGGCGGGTTCAGAGCTCGGAGGGGTGGCTTTGCCGGAAGATCAGGGCGCNATCCGTATGGTGCGCGCTTCCCTCGCGGCGGCGGCCGGCATCAACAAGGCAGTTTCAAGCGTAACTTTGATGCACTAGCGACGGGAAAAGGTGAAGGCAGTTGTAGAGTGACTGGCAGCGGAGAGAAAGGGAAGATACAACATGGCATGGAACCAGGAAAGGAGGTAGGAGGAAGCAAAGGGGCTGGGCAGATTAAGATCGGTAAGGTTGAGGTTCCGGTGAACTCGGAGGCAAAGAAAGGAAAGAAATCAGTTTCTGAGAATGACGAAGAGGAAGAATTGATGGAGTTTGAAGGTGCTCAGCGGGAGTTTGGGGACAGAAAGGGAGAGGATCCAAAAGGAAGTGCAAAGGTGAAGATATGCTCTAGGTGCACTCAGAAAGGGTATGACTATGCAGATTGCATGATAGATGTTTATTGCGATGTTTGCGATTCAACCGAGCACGTTATTCATAAGTGCCCGGTTCTGAAAATTCCAAAACCGGCGGTTCAAGCAGTGGGTTATGCGGTTGATGGCCTAGGGTTTCATCACATACCACATCAACCACTACAAAGGAGCAAGAAGGGCACAAAGAAGGCACTTGTACGAGTTGTTGGTGGCTCTCTTTCTGTTGAAAGGTTAGTTGCTCTTTTACAAAAGCTGTGTCCAGCCAAATGGAAATGGGAACCAGTGCCACACGGGAAGGAAGCTTTTGTCGTTCTTTTCCCTTCGAAGGGTGAGTTACAGCGTGCTATCAACTTTGGTGGAGCTGATGTAAAGGAAGGAGTGGCTACTGGGGTAAGAGTAGAATTCGAGGAGTGGTTCGAAGAAGATGAAGGTTTTCTTTTGCCTAAGGTTTTACCATACAAGCTAGGCAAGCTCAGTTATGGTAAAATATTGAACAGGTAA</cdnaseq>

Protein Sequence

<aaseq>MAEGFTADEVFQAGEHLLLVPPIKPSSCSKNKRAFGNGWLARRIVDAVAGQTVSKCKPWKGPLPSARCSQPLTIGDKLAEALAAMPRLQARPGSSNWAAGKRTVKEVELNLDQRATKCRGERFVEKDCRAAEKEGHEVILGKGVVQLDVGETEESGQLPNSNSKRLELGAHVRPIYLGSGRRPIRFYPGVGRLLSQAGRHPRASKEMKPSGILGKEKSTQSLRRAADAGVINSFASHRTLSKLREAEQVTGREPGRRCDLGEAMAQHGGWGWERGDESQWEDDESFFHGRREGDERLRFQPGVGFGQGSGGRSRPPYGFRSRGTGGFRARRGGFAGRSGRXPYGARFPRGGGRHQQGSFKRNFDALATGKGEGSCRVTGSGEKGKIQHGMEPGKEVGGSKGAGQIKIGKVEVPVNSEAKKGKKSVSENDEEEELMEFEGAQREFGDRKGEDPKGSAKVKICSRCTQKGYDYADCMIDVYCDVCDSTEHVIHKCPVLKIPKPAVQAVGYAVDGLGFHHIPHQPLQRSKKGTKKALVRVVGGSLSVERLVALLQKLCPAKWKWEPVPHGKEAFVVLFPSKGELQRAINFGGADVKEGVATGVRVEFEEWFEEDEGFLLPKVLPYKLGKLSYGKILNR</aaseq>

Gene Sequence

<dnaseqindica>1..1854#2708..2761#ATGGCAGAGGGTTTTACTGCTGACGAAGTTTTCCAAGCTGGAGAACATCTGTTGCTTGTGCCACCAATCAAGCCTAGCTCGTGTTCTAAGAACAAACGAGCTTTTGGAAATGGTTGGCTGGCAAGAAGAATTGTAGACGCAGTGGCAGGACAAACTGTGAGCAAGTGTAAACCATGGAAAGGACCACTGCCTAGTGCCAGGTGTTCGCAACCTTTAACCATTGGTGATAAACTAGCCGAAGCCCTCGCTGCGATGCCCAGACTCCAAGCTCGGCCAGGTTCGAGCAATTGGGCTGCAGGAAAAAGAACGGTGAAAGAAGTAGAGTTGAACTTGGATCAGAGAGCTACGAAGTGCAGAGGAGAGAGGTTCGTAGAGAAGGATTGTAGAGCGGCGGAGAAGGAAGGACATGAGGTGATCCTCGGAAAGGGAGTCGTGCAGCTGGATGTTGGAGAAACCGAGGAATCTGGTCAGCTACCTAATTCAAATTCCAAACGGTTGGAATTGGGCGCACATGTCAGACCCATTTATCTGGGATCAGGGCGGCGACCAATTCGTTTTTATCCTGGAGTGGGCCGTTTGCTTTCGCAGGCTGGGAGGCATCCTCGGGCGTCCAAAGAGATGAAGCCCAGTGGCATACTTGGGAAGGAGAAAAGCACACAGTCTTTACGTCGAGCGGCGGACGCTGGAGTTATTAATTCATTCGCGAGCCATCGCACACTTTCCAAACTGAGAGAAGCTGAACAGGTTACGGGGAGAGAACCAGGGCGAAGGTGCGATCTGGGCGAAGCCATGGCGCAGCATGGTGGCTGGGGTTGGGAGAGAGGTGATGAGTCACAGTGGGAGGATGATGAGAGTTTCTTTCATGGGAGGAGAGAAGGTGATGAGCGGCTCCGTTTCCAGCCGGGCGTAGGGTTTGGGCAGGGGAGTGGAGGAAGAAGCCGGCCGCCGTATGGCTTCAGGTCAAGAGGGACCGGCGGGTTCAGAGCTCGGAGGGGTGGCTTTGCCGGAAGATCAGGGCGCNATCCGTATGGTGCGCGCTTCCCTCGCGGCGGCGGCCGGCATCAACAAGGCAGTTTCAAGCGTAACTTTGATGCACTAGCGACGGGAAAAGGTGAAGGCAGTTGTAGAGTGACTGGCAGCGGAGAGAAAGGGAAGATACAACATGGCATGGAACCAGGAAAGGAGGTAGGAGGAAGCAAAGGGGCTGGGCAGATTAAGATCGGTAAGGTTGAGGTTCCGGTGAACTCGGAGGCAAAGAAAGGAAAGAAATCAGTTTCTGAGAATGACGAAGAGGAAGAATTGATGGAGTTTGAAGGTGCTCAGCGGGAGTTTGGGGACAGAAAGGGAGAGGATCCAAAAGGAAGTGCAAAGGTGAAGATATGCTCTAGGTGCACTCAGAAAGGGTATGACTATGCAGATTGCATGATAGATGTTTATTGCGATGTTTGCGATTCAACCGAGCACGTTATTCATAAGTGCCCGGTTCTGAAAATTCCAAAACCGGCGGTTCAAGCAGTGGGTTATGCGGTTGATGGCCTAGGGTTTCATCACATACCACATCAACCACTACAAAGGAGCAAGAAGGGCACAAAGAAGGCACTTGTACGAGTTGTTGGTGGCTCTCTTTCTGTTGAAAGGTTAGTTGCTCTTTTACAAAAGCTGTGTCCAGCCAAATGGAAATGGGAACCAGTGCCACACGGGAAGGAAGCTTTTGTCGTTCTTTTCCCTTCGAAGGGTGAGTTACAGCGTGCTATCAACTTTGGTGGAGCTGATGTAAAGGAAGGAGTGGCTACTGGGGTAAGAGTAGAATTCGAGGAGTGGTTCGAAGAAGATGAAGGTTTTCTTTTGCCTAAGGTTTGGGTAAAGGTTTTTGGGCTGAGAAAGAAATTAAGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCGTCATCGCCGGCCGCGGCCGCAACGACAGGAACGGCGGCGGCGGCGTTCCCGTCTCCGACGACACCGACAACTGAACTAGAAGCTGAAGCCATCCGCTCCTCCAATTTCTGCTGCTACTATGGGCTCCTTTTATGCTCGCAGCAGAATTTTTCAGGAGCAAAGTTAAAATAATTACGAAGAGCTCTTATAATCAGTTAAAATCTCTTGTTGATCTCTTCCTCTCGCCCCTGTCTTGGTTGGATTAGCTGCCATATTAGAGTAAGCACTAATCCATCCATACTTCTCGTTGATTTCGTGTGGTTAAGTCGTCTTAGCCTTTCAGGTTCAGGAGGTTGTTAAGGTTTTTAAGTAAGAACCTCCTGTAGCTTACTTGCTTGTTAAGGTTGTTAATGTTGTCTTCTAGTTCTTGGCTTGGTGTCTTTTGGTGTTTATGTTTGATTGTATAAGTTGTTTTCTTAGATAATGGATTGTATAAGTTGTTGGATGGATCAGCAAGTATTAGGCCTGGTCATTCCTTCCTTGTGTACTACCTCCCATGTACTATGTTTGGTTTTCTACTTGTCAATTCAGTTAAGCATTTGTGTGTAAACTGTGTTAGAACTCTGCTTTTTGATGTTGTGGAATTGAAATTTCTGGTCAAGTTTTATTTCATGGATTTTCTGAACCTTACCTGTAGCTGCATTATAAGTGCAACACAGCAAGGCCAGGGTAATCTGTCAATTGTCTGCGCTGAAAAAAAAAATGAACTTTCCTTTGCAGGTTTTACCATACAAGCTAGGCAAGCTCAGTTATGGTAAAATATTGAACAGGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017900