Difference between revisions of "Os11g0660000"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os11g0660000| Description = Sodium/calcium exchanger membrane region domain containing protein| Version = NM_001074934.1 GI:115486516 GeneID:4351...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os11g0660000|
 
GeneName = Os11g0660000|

Revision as of 21:23, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os11g0660000

Description

Sodium/calcium exchanger membrane region domain containing protein

Version

NM_001074934.1 GI:115486516 GeneID:4351058

Length

3965 bp

Definition

Oryza sativa Japonica Group Os11g0660000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:28331106..28335070

Sequence Coding Region

28331334..28331631,28331739..28331868,28331959..28332175,28332819..28332940,28333044..28333192
,28333305..28333423,28333509..28333684,28333765..28334125

Expression

GEO Profiles:Os11g0660000

Genome Context

<gbrowseImage1> name=NC_008404:28331106..28335070 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:28331106..28335070 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaacattaacatggcagatactgttccttcctgtgatacttacctgttgttcaatggagaaacactgcttccaattggtgtccgtgcgtttatttataccgctgtcctcgcgtactgttttattggtctatccgcgatcactggccggttcttcaaatcgatggagagcatcatgagacactcccgggaggttgtcacagtagacccacacacaaatgctactattgtcaagcatgagaaggtgtggaactacactatagcggacgttgctctcctcgcatttggtactagcttccctcaaatttcactagcaacgattgacgcaatccgaaatctgggtcagctgacagcaggaggtttaggtccaggtacccttgtgggttctgctgcatttgatctgttccccatacatgctgtttgtgtggttatgccaagggcaggctctaagaaaaagatatctgatctcggtgtttggttagttgagctgttctggtcattctgggcatacatttggctgtatattatattagaggtgtggacacctagagtgatcaccctctgggaggccttgctgacagtactgcaatatggactgcttctgcttcatgcatatgcgcaggataagcgctggccatatgtgtcaatccctttggcaagaggtgagagacctgaagattgggttccggcggaagatgcttcagttgattatgatgataactatgatgggattggggatatactccctggccagaatgaggatattgtggatatattctcagcgcattcttacagtaatgaagggtatcaccatgtttcagaagaggatgtggaagaatcttcaacaggtcttacattaaagaacaaatgggaggatactcactggttttctatttggtggcaacaatttgttgatgctgcaacgttggagagttcagtgtcaagaaagatggattctacctgcttgagagtcatcggaatctcatggaatttaatcattgcaccttggaaaatgctatttgctttcgttcccccttatgaaattgcgcatggctggatcgcttttatttgctcactaatcttcataagtggtattgcttatggggttactaagattacagatcagataagctgtgtcacaggagtaagtccatatgttatagcattcacagcactggctgctggaacatcatggcctgatctagttgcaagcaagatagcggctgagcgtcaaatcaccgccgactccgcaatcaccaacatcacttgcagcaattcggtgaacatatatgtcggcattggtgttccatggttggtggacacaatgtacaactattttgtctaccagaagcccctgtacatagacaatgctgctggcctcagcttctcccttctggtcttcttcgcgacgtcattcggttgcatcacggttttggttcttcgtcgcgtcatacttggcgccgagcttggtggccctaggatgtgggcttgggcaacatcagtgtacttcatgatcctttgggttgtctttgttgtactttcatccttaaaaatctctggagtaatatag</cdnaseq>

Protein Sequence

<aaseq>MANINMADTVPSCDTYLLFNGETLLPIGVRAFIYTAVLAYCFIG LSAITGRFFKSMESIMRHSREVVTVDPHTNATIVKHEKVWNYTIADVALLAFGTSFPQ ISLATIDAIRNLGQLTAGGLGPGTLVGSAAFDLFPIHAVCVVMPRAGSKKKISDLGVW LVELFWSFWAYIWLYIILEVWTPRVITLWEALLTVLQYGLLLLHAYAQDKRWPYVSIP LARGERPEDWVPAEDASVDYDDNYDGIGDILPGQNEDIVDIFSAHSYSNEGYHHVSEE DVEESSTGLTLKNKWEDTHWFSIWWQQFVDAATLESSVSRKMDSTCLRVIGISWNLII APWKMLFAFVPPYEIAHGWIAFICSLIFISGIAYGVTKITDQISCVTGVSPYVIAFTA LAAGTSWPDLVASKIAAERQITADSAITNITCSNSVNIYVGIGVPWLVDTMYNYFVYQ KPLYIDNAAGLSFSLLVFFATSFGCITVLVLRRVILGAELGGPRMWAWATSVYFMILW VVFVVLSSLKISGVI</aaseq>

Gene Sequence

<dnaseqindica>3440..3737#3203..3332#2896..3112#2131..2252#1879..2027#1648..1766#1387..1562#946..1306#ctgcttccttcatccacaccaaaagcaagaaccccaagaaccgcagataaaaaggggagcaagaagaactttgctccgatccgccgccgccatctgctccctccaccccggtaatctgccactcctcactacttggttttgttcattcatcttggcttccaagtttcaacatccaactctcttggggaaggggggaaaaatccctcctttgtttcctctctccaagaagtttgggagggatcccctttgatcttaaacaaatgcccaagttcgtcgcattcaacctttccggatctctgtaggggtattgataaaaaaaaagataagagatttttagggagtggcaaaaaggagtgttttttttaaaaaaaattttggtcaacttattaggattagtgttgtttaacacatccatcgatgaggtggcatctagcaattttgtggttactcgatccagtgcttcagttgttcgaatcagttccttgtgatatcctcgtttttttttattgctctcatttgctgttgtaattcaggattttttatcacctgatatatatatctaaatttattcccctgttaccaatttttctctccatgaatcgttcggcaacgagatcattggaataatttagtttttcttcacgaggtcttttacctttgcactgtttgctagccttccagactactcctgtttggtttggtggtgaagtggtgaacaccttttcatcaaaaagccaaaaaagttcttttaagcttgacaatttattagttgctgaactaggtaggttgatattgtactgtagtagccattattttctcctgttcataagctaacattttcttgatgttagtatttctgatggaaactggcatttgtgttgtaacaggaactgggaatactgcagttctcgtcttatactaggctactagcactcctctgatctgatggccaacattaacatggcagatactgttccttcctgtgatacttacctgttgttcaatggagaaacactgcttccaattggtgtccgtgcgtttatttataccgctgtcctcgcgtactgttttattggtctatccgcgatcactggccggttcttcaaatcgatggagagcatcatgagacactcccgggaggttgtcacagtagacccacacacaaatgctactattgtcaagcatgagaaggtgtggaactacactatagcggacgttgctctcctcgcatttggtactagcttccctcaaatttcactagcaacgattgacgcaatccgaaatctgggtcagctgacagcaggaggtatactttgatcacctcatgcaaatgtttgttccaaagcatccgcaattgtatctaattcggtttcttgtgatttgcaggtttaggtccaggtacccttgtgggttctgctgcatttgatctgttccccatacatgctgtttgtgtggttatgccaagggcaggctctaagaaaaagatatctgatctcggtgtttggttagttgagctgttctggtcattctgggcatacatttggctgtatattatattagaggtaagccatacattctcatcctgctatctaattataagcactaaatccagcattaggtcatattagtacttttcgctgtatacaggtgtggacacctagagtgatcaccctctgggaggccttgctgacagtactgcaatatggactgcttctgcttcatgcatatgcgcaggataagcgctggccatatgtgtcaatccctttgtatggtcctaatcccttaaataatcgttccttttatctaatctttcctgtggccatgtacaaattaaggatgcactttcctgatgcttctagttttatttgctgaaaacagggcaagaggtgagagacctgaagattgggttccggcggaagatgcttcagttgattatgatgataactatgatgggattggggatatactccctggccagaatgaggatattgtggatatattctcagcgcattcttacagtaatgaaggtaatcaatttctggttttttttcactcactattttctttacttcgtgtaacaattcttcggggttcgaattattctgaaagtagtttcttattgcctttcagggtatcaccatgtttcagaagaggatgtggaagaatcttcaacaggtcttacattaaagaacaaatgggaggatactcactggttttctatttggtggcaacaatttgttgatgctgcaacggtaatttaattcactatcactctatatattataccttgccaatgccatttcctgtttaaattagaattaatgctcagttattagatcaatgtagtttggcaagggtacttttgtgagggggtactttctaaacttaattttgcaagccaacaaggacataacaatgacaagatatttttttaatgagagttatggtggattgagaaggatgttctagactttataagacaactgcaaaacttatttctagttacgcattcagtggaactacaggggtgtatgacttggataacttatacagtcaggagaactttatctgttgaatatcatcacaccaaatcaaattttatgccgctcttgtgctgtattcttgtgttattggtttaccatttctaatatatcaccaaaggcaaaatagaatagtaaagcatattcttttatctttgtttaagagtgtttaccacaagcctaacagtgtacagccttcagttgatgaatccttcttagcagattttaacattgaattgaaacctaagtcgcactcgtttttaagtctttgaagtacattgatttgaactgaaagtaacaaaaattgctacagcattcccattggttataagtgattttgttattatgtgagcagttggagagttcagtgtcaagaaagatggattctacctgcttgagagtcatcggaatctcatggaatttaatcattgcaccttggaaaatgctatttgctttcgttcccccttatgaaattgcgcatggctggatcgcttttatttgctcactaatcttcataagtggtattgcttatggggttactaagattacagatcagataagctgtgtcacaggttggaacatgctcctgtacaagttcaatttatcatctgtcaagggtgtagctgcttgcttgctgatacaaaatctactatcctgtgtaggagtaagtccatatgttatagcattcacagcactggctgctggaacatcatggcctgatctagttgcaagcaagatagcggctgagcgtcaaatcaccgccgactccgcaatcaccaacatcacttgcaggtacatttctgcacatctcctctccaattagttgttcatgcctaccttcaaccttttgtaaatttatcttatcgaggcgggataaacggtatatcttatttccacagcaattcggtgaacatatatgtcggcattggtgttccatggttggtggacacaatgtacaactattttgtctaccagaagcccctgtacatagacaatgctgctggcctcagcttctcccttctggtcttcttcgcgacgtcattcggttgcatcacggttttggttcttcgtcgcgtcatacttggcgccgagcttggtggccctaggatgtgggcttgggcaacatcagtgtacttcatgatcctttgggttgtctttgttgtactttcatccttaaaaatctctggagtaatatagattacctacaaagtatatatagctgtagttcttcattcttttctatatctatctcttatggttttctttttatatatacatggccatttttacacacaggaaatgtagaaggccgaccaaagttagtcatcatataggtactgtacatatatacattacatgtgcttgatcgatgtattatttttgtaagctactgcatattcatataatgaaaagcttttctgcctg</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0660000, RefSeq:Os11g0660000