Difference between revisions of "Os11g0661800"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os11g0661800| Description = Concanavalin A-like lectin/glucanase domain containing protein| Version = NM_001074944.1 GI:115486536 GeneID:4351068|...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os11g0661800|
 
GeneName = Os11g0661800|

Revision as of 21:23, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os11g0661800

Description

Concanavalin A-like lectin/glucanase domain containing protein

Version

NM_001074944.1 GI:115486536 GeneID:4351068

Length

4951 bp

Definition

Oryza sativa Japonica Group Os11g0661800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:28419829..28424779

Sequence Coding Region

28420310..28420537,28423613..28424221,28424330..28424779

Expression

GEO Profiles:Os11g0661800

Genome Context

<gbrowseImage1> name=NC_008404:28419829..28424779 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:28419829..28424779 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagccggcgtcgttgttcagcttcgtgagcgcgatgataaagctggcgatgaagatcgccacggtggcgaagaaggctcgccagaaccagaccaagtgcctggagctctccgaccgcgcgcggcgagtcgccggcatcctgagcaactacaactacaagcccgcggctaccggcgaggcggcggcggcggcgacgtgggacatgctgggcagcctcaacgaggccctcgacgaggcgcacaagctcgtcgagtcctgctgcggagacggccagatgtacaggctcgtgggcagccgcgcggtggacgccaagctggacagcgtcaataacaagatcagcaactgcctcatggacctcctcgccgcccaaggcgcaggcacggcgaagaagatcgatgagctgcaccttgtggtcgtggatcgcaatcaccaccgtgcaagcaattcgaacgccggcgtccgcgaggataagatgaccagtcatcagcacgccgctcctggttatagccgcccaaacaattcagcacgaatgaagcagaacaccgccggcatcatgttcggcaaccacaccgcttccgatcatggccgccgcttaaacagttcagtaagatcactgagagtgatgaacccggctctcagtcatcaccagctggcaaacaattcagcgtggtggaagcagagtgagatcaacaccggcagctcaaattattcggtaagatcgctaggagagagcagctctgccaagtcgtcctcgggaagatcgtggacagagatcaactctgccaactcttcgatagtaagatcgcggacaaagatcaactctgctcactcttcgatagtaagatcccggacagagatcaactctgctcactcttccatagtaagatcgcggacaaagatcaactctgctcactcttcgatagtaagatcccagacagagatcaactctaacaggtcctcgataaattcggtgagagagatcagctctgccaaatccatccacaaagagaagatcgaccctctccttgctcacagtcatcaccaggcaaacaattcagttagggtgagctacacctgcaagaacggcaacaagagcgtgcagcagaacggggtaaacagcagcaattcgatgagaagcgagaaggcttccaccgcggctacggctaggccgccattacagggctcctactccgacgccggcgtcgcgggctacccgaacgggcaaggctacgctctctaccaatattccattgaggatgatccaacctcctgcgccgtaatgtga</cdnaseq>

Protein Sequence

<aaseq>MEPASLFSFVSAMIKLAMKIATVAKKARQNQTKCLELSDRARRV AGILSNYNYKPAATGEAAAAATWDMLGSLNEALDEAHKLVESCCGDGQMYRLVGSRAV DAKLDSVNNKISNCLMDLLAAQGAGTAKKIDELHLVVVDRNHHRASNSNAGVREDKMT SHQHAAPGYSRPNNSARMKQNTAGIMFGNHTASDHGRRLNSSVRSLRVMNPALSHHQL ANNSAWWKQSEINTGSSNYSVRSLGESSSAKSSSGRSWTEINSANSSIVRSRTKINSA HSSIVRSRTEINSAHSSIVRSRTKINSAHSSIVRSQTEINSNRSSINSVREISSAKSI HKEKIDPLLAHSHHQANNSVRVSYTCKNGNKSVQQNGVNSSNSMRSEKASTAATARPP LQGSYSDAGVAGYPNGQGYALYQYSIEDDPTSCAVM</aaseq>

Gene Sequence

<dnaseqindica>4243..4470#559..1167#1..450#atggagccggcgtcgttgttcagcttcgtgagcgcgatgataaagctggcgatgaagatcgccacggtggcgaagaaggctcgccagaaccagaccaagtgcctggagctctccgaccgcgcgcggcgagtcgccggcatcctgagcaactacaactacaagcccgcggctaccggcgaggcggcggcggcggcgacgtgggacatgctgggcagcctcaacgaggccctcgacgaggcgcacaagctcgtcgagtcctgctgcggagacggccagatgtacaggctcgtgggcagccgcgcggtggacgccaagctggacagcgtcaataacaagatcagcaactgcctcatggacctcctcgccgcccaaggcgcaggcacggcgaagaagatcgatgagctgcaccttgtggtcgtggatcgcaatcaccaccgtgcaagcaattcggtactatatagtataaatatagataatcaaactggagttgttttcttcgttgtgctgattgagttgaccaattaattgatcatcgatcatccatgttcttattgttagaacgccggcgtccgcgaggataagatgaccagtcatcagcacgccgctcctggttatagccgcccaaacaattcagcacgaatgaagcagaacaccgccggcatcatgttcggcaaccacaccgcttccgatcatggccgccgcttaaacagttcagtaagatcactgagagtgatgaacccggctctcagtcatcaccagctggcaaacaattcagcgtggtggaagcagagtgagatcaacaccggcagctcaaattattcggtaagatcgctaggagagagcagctctgccaagtcgtcctcgggaagatcgtggacagagatcaactctgccaactcttcgatagtaagatcgcggacaaagatcaactctgctcactcttcgatagtaagatcccggacagagatcaactctgctcactcttccatagtaagatcgcggacaaagatcaactctgctcactcttcgatagtaagatcccagacagagatcaactctaacaggtcctcgataaattcggtgagagagatcagctctgccaaatccatccacaaagagaagatcgaccctctccttgctcacagtcatcaccaggcaaacaattcagtaagatatctatactatcttcgtcactcactctctctctctatatatatatagccaaaaattattactacctccgtcccaaaataagcgttgccatgagtttccgtgtccaatttcgattgtccgtcttattttaaatgtttcatgattaatgtttttattattattagattatatttttttagactggtcaccagggggcgaaatgcccacctgaatatattacttccaacgatcttacacagggcaggtttcacctgcgtaaatacaggagccctggaggataataagaaagaatacacgggggtatacagagaagagaatacagacgcatcacaacctccctaccacgcactgagaagctttgacgtttgccacctgcaaaaacacccgaccaaattccaaatcaaactaatgctagaaccctaattgaacatcatccacttcgcatgcagacttgaaacaccaagaatcgaaggtgccggagggcctcagtgccacgcgcataccggcttggttctctggcagtcgaaagactgtggttatcgaagaccacccgcatcaagccgtcagaagtacgacttagtcatgttgctacttgaatcaatgccccccgacgtctattgggggaaggaagccccaaaagagggaaggccactgaaagttgaggccataggccacccgcatcaagccgtcttcaatcgagctttatcaaattgctagccagttcaacgcccttcgggggaagaaagccccataggaggaaggaccgctaaacattgcagtcagggacacccaagcagagagggtgaagggcaatcaggggactgaacaaaagagaaatgaaagagatggggatctacagatggatgaaacatcaacagaagagaacaaagatcgggagcatcacgaccgccggagaagcacatgttccaaccaataggcaaacccaagcgagccaaggagaagcatgctagaattgaggagattcagagcggccgaggcaccagcaaactcctagacatgcaggtttgggctgagctgatcgtggcaaagctcaaaatgcttccaaccgccgggtagacaagaagaaaagaaaatggagcagacatcggcaaagtcagcagcgttgtcggtcgccactgagctgaccaattccggccatgctgccaaggggaaggtggatctgggcaccggcaacaggcgacgtcgcagcccaccgacgacattgcaggcagcaagccgtccccaccacacgaccttgccggaggcagggggacatggtaggaggcggaactgacggctgcccaccaccacggccggctgccgtcgccggaggctgcaggggcgtggtaggaggcagatctgatggccacccaccaccacggccggctgccgtcgccggaggctgctggggcgaggtaggaggcggatctgacggccacccaccaccacagccggctgccgtcgccggaggcaggaggaacagggcgggagacaagctagcatgaagagagttttggatctggaaaagaaaaggagaggaagttaatggtgtggggaggtcgtggtgctggggggggaggcgagcgccgccgccggcaatgccaccgggggcagcgtcgccggccgcggcgaggctgcgcgcgcgtaggaggagcgggcctcggcgactgtcgcctcccgggtctctccaccattattataaaacatgaatactctctccatcccataatataaagcgtgcacgcatttcaagaatcaacatttaaaatatttgaccaacacttagtatagtatgaaataaatattatttggtaaaaattatagcattatattgacatttaaatttactttcatatggttataattttgttgctacaaaccttataatatatgagaaattataagctaaagattagttttggagaccgtgacaagtttaaccgcgccttatattatgggatagagggagtagtactttatgcgagactttttttttgttttgttaaaaaaaattaaataagacggacgattaaagttggacacgaaaactcatggctacgcttattttgggattgagggagtatattttaggacggagatagaagtaaatatttagtaattatgggtaagtttccatggccccttgttcgatctgctttattatcaaagttttttctttttttttccttttgctgtttgtatattgttatgatcaattaatatgacttgctggaaattgaacctatcctaggtcttgtccgaaagattagcctagagctaattttaagagttacggagtaatatttaatcttgaattggtagactaaacattagtctagagtgacatgtttagatccatgagctaattcagggctaaaaggcgaagagagagaaagaggaaagagaggggggagatagggctacttttaagtggtccacacagaaaattagccccattagcaccttttgaagaggctaatgttttgagaatggctaattcactttagccccaaattagcccacatgtttggattgttggggtctaattcagagttaaaaggtgggagctttagaaccaaagagctctagagtgagtttagtgttttgttagttcagctttgaagactaaaattaataatcagcgagctgtaacagacgtgacttttctccaaaatcactataataattcataaaaatcaacatgttcaatgtatagcagttacaattttaatattagtaacaattatagcccgtgaccccgtgtagtgcattggatgacagatagtactacttccatcccagaataagtacaactgtgattattcgtgtccaacgtttgacccacgaaaaaataatcacacataaagtactatttatgttttatcatctaataacaataaaaacaataatcataaaaaaattcaaataaagaatgtcaaatgttagataaaaacagtgcaaaattacatttattttaggacgggagagtagtacgcattattaacttcattccttgaggcttgagttgattgagcctacctatgatcttcttctctctattgttcgaaggttagggtgagctacacctgcaagaacggcaacaagagcgtgcagcagaacggggtaaacagcagcaattcgatgagaagcgagaaggcttccaccgcggctacggctaggccgccattacagggctcctactccgacgccggcgtcgcgggctacccgaacgggcaaggctacgctctctaccaatattccattgaggatgatccaacctcctgcgccgtaatgtgatgtgcagagcagaggaagccatgaatctaagctccggcagaggacgcagcctgtgcttgatccatgaccctgcatctgcatgattcctcgaaccgatcgatgaggctttatttttctctcgcgtatttcgggtgcccggaaatccatggattatgtgatggttcttacattacgcatgtgcattaatcgcgacatcacgcatccatttgggtagtagcatctcgggattgtaatgttgcgtgtttggatgtccgtgtaattttttcgccggacgcatgtctggtgttgttaatgactgtaggctcctatagtagcaaatgacaacaagttttttttactaaagtatgtactatatgcctatacgattaatatcattaaactttaatgctacaggacagtatcccgttcggatgatactcgaaaatataggcgatacctcatatgtatcatcccatccgtactgtcgtgtaactttcaccag</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0661800, RefSeq:Os11g0661800