Difference between revisions of "Os11g0672700"

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(Created page with "{{JaponicaGene| GeneName = Os11g0672700| Description = ATP-dependent DNA helicase RecQ family protein| Version = NM_001074968.1 GI:115486584 GeneID:4351098| Length = 4704 ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os11g0672700|
 
GeneName = Os11g0672700|

Revision as of 21:23, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os11g0672700

Description

ATP-dependent DNA helicase RecQ family protein

Version

NM_001074968.1 GI:115486584 GeneID:4351098

Length

4704 bp

Definition

Oryza sativa Japonica Group Os11g0672700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:29022031..29026734

Sequence Coding Region

29022254..29022364,29022455..29022679,29022765..29023118,29023197..29023311,29023398..29023441
,29023542..29023638,29023759..29023922,29024015..29024242,29024419..29024738
,29026544..29026652

Expression

GEO Profiles:Os11g0672700

Genome Context

<gbrowseImage1> name=NC_008404:29022031..29026734 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:29022031..29026734 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggggtacgagagggagaagaagcggctgctcgacctggccgctgactccggcttcgagcgcgacctcgccgccgactgcctcgacaggatcgtccgcctctacggagagggcggacaaggttttattaccgtggagaactgtggagacgatttccttggcgcattggctgatgcaacaaacaataatgatgattgggatgatctcaatgctatagagaatgaagcttgtggcaatttgaatggcatgatgaagcacggtgtaattgatgataaagaagttgaggtgagaactcctttgttcagacaggcagaatcctctgctcgacagactcgcatcaatctggactccttcgggttctcctcagatgatgactttgaaacgttggagtcccattgtgatcgttcagtcagtacccagaagaaggtgaacagaggaaacaatagatgtgagtcatccacttcaacttcaaacagagaaactctaagttatcagcagctgtatagcctagatgacatcaattttgcaaacgttgtcatctttggcaacaaaagctttaggcccctgcagtatgaggcctgtagggctgcagtaagcaacatggacacctttgtgcttatgccaacaggtggtgggaagagcttgtgttatcagctacctgcaacactgcacccaggtgttacggttgttgtatgccctctactgtcacttattgaggatcaaattgtggcattaaacttcaagtttgctataccagcagcatttttgaactctcagcagacaccttcacagtcatctgcagtaatccaagagcttagaagtggtaaaccgtcattcaaactcctctacgtcactcctgaaagaatggctggaaacagctcatttattgggatcctcataggtttacaccagaggggtttactggcgagatttgtgattgatgaagcccattgtgtaagtcaatggggacatgacttccgcccagattaccgaggcctgggatgcctcaaacagaacttccctcgagtaccaattatggctttaacagctacagcgactgcatctgtctgcaaggacatactaagtaccttgaggatccctaatgcaacggtactcaagaggagctttgacagaacaaacctgaattatgaggtgattggcaagacaaaaactccacagaagcagctgggtgatctcctaaaagagcgtttcatgaacatgtctggtatcgtgtactgtctgtccaaaaatgaatgtgctgacactgccaagttcttgagggagaagtacaagataaaatgcgcacattaccacgctggcttggctgctcgtcaacgatccaatgtacaaggaaaatggcacagcggagaggtcaaagtcatttgtgcgaccatagcatttggcatgggaatagacaaacctgatgtgcgctttgttatccacaacaccatgtcaaaatcgatagaaagctactatcaggagtcagggagagcaggaagagacaatcttccggcacattgcattgtgttatatcagaaaaaggacctcggtcgaattgtatgcatgctgaggaattcagggaacttcaagagtgagagcttcaaggttgcaatggagcaagcaaagaaaatgcaaacatattgcgagctgaagacagaatgccggaggcaaactcttcttggccacttcggtgagcagtatgacaggcaaaggtgcaaacatggttgtagcccttgcgacaactgcataaagattccctcttga</cdnaseq>

Protein Sequence

<aaseq>MAGYEREKKRLLDLAADSGFERDLAADCLDRIVRLYGEGGQGFI TVENCGDDFLGALADATNNNDDWDDLNAIENEACGNLNGMMKHGVIDDKEVEVRTPLF RQAESSARQTRINLDSFGFSSDDDFETLESHCDRSVSTQKKVNRGNNRCESSTSTSNR ETLSYQQLYSLDDINFANVVIFGNKSFRPLQYEACRAAVSNMDTFVLMPTGGGKSLCY QLPATLHPGVTVVVCPLLSLIEDQIVALNFKFAIPAAFLNSQQTPSQSSAVIQELRSG KPSFKLLYVTPERMAGNSSFIGILIGLHQRGLLARFVIDEAHCVSQWGHDFRPDYRGL GCLKQNFPRVPIMALTATATASVCKDILSTLRIPNATVLKRSFDRTNLNYEVIGKTKT PQKQLGDLLKERFMNMSGIVYCLSKNECADTAKFLREKYKIKCAHYHAGLAARQRSNV QGKWHSGEVKVICATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGRDNLPAHC IVLYQKKDLGRIVCMLRNSGNFKSESFKVAMEQAKKMQTYCELKTECRRQTLLGHFGE QYDRQRCKHGCSPCDNCIKIPS</aaseq>

Gene Sequence

<dnaseqindica>4371..4481#4056..4280#3617..3970#3424..3538#3294..3337#3097..3193#2813..2976#2493..2720#1997..2316#83..191#tttttttttgcccctctctccggcgaccggcgctagggtttcctccattcggcggggcggaggtggggcgcgctcgccggagatggcggggtacgagagggagaagaagcggctgctcgacctggccgctgactccggcttcgagcgcgacctcgccgccgactgcctcgacaggatcgtccgcctctacggtaaccgccgctcgacctcgttcccctcctcctctagcctccgctgccgacggtttcctctaccgataatgcaggaggatttctcggtagttaattggggttttgagttggggattgttttagttttgggatccctcgaaggctcgaaatgctatggatcttcttttgactgaaaaaatgcaacaaattttagccattagtttgtcaggctaattcagtaattttaaattccagctgctcccatcactattcagtaattttatgttttttacctttagagtaaaggtcacaagacatcactatatttttcatccattgcatcgttgccacctactcaggcttctgccaccactaaaccaaatccagtttcttcttccctctaatggttgttataaaagagaatgacttttcagaatcgttttcttgtaatctatttgtgcgaaaggaggagacattcaatcctgctttatttcatagtcatcagtaaacacagcatagcatttaggtgcaattcagtaattttcatttctagctgctgctcccattactgtttttcacatccattgcatcgctgcatcctacagagccttctgccaccactgaatcaaatccactttcttcttccctctgatggttgttataaaaaaaatgacatttcagaatcattctcttgtaatccatttgtgcgaaaggaagagatattttaatcctgctttatttcagaatcatcagtaaacgccatgacagtcaatcgcgttgttctggtattatatgttctttattagccagttacatagcatttaggtacaattacatttcttgcaaatttatatttagcaagtcatgttgtataactaaaccaatttgatgagttgcctacttgtaaatgggaatcttagtgtaggtatgtggggacaactattggtaaattacatagttttatcatcagttacatggtgtgcaattattgatcaattaccaagttttatcgtcctttacacagtttaggataattgatcaattatatagtttttttcaatatgtacgatcggtcttccctttccacctccaaatgcatgattcttccctggcagagcatgccggtggctcacttccttgtctctaatggctcactccatctggcaccagccctagcttctattcatgagctgctgaaacttaaaattatatgacactatgttctgctatcaatcacagataccatataatcgaaattgggaacttcataataggtccggctgccacccaccatagagaactgccccatgatccgaagcagcaaattcatcgagaagaactgaactaactttactgatttgtctttagcatctaatatgataccatggacaaaatttcctatctaacctttcagccaacctctaagctaaaatttcgcctacctttttaggtaacttttcataggtaccttgtgctaaccattagattttaattgatcaacggttgtcttaatttccaagtactggagaaagtctcttgttacatatatctgtgctaaattttggtgggttttagttccgtttcttaactttataggggacctcttacaacctttaaagtatgcactatctatggagttatgatattcttttatatcatattatagtatccatagtccacatcaagcgcttgcttttgctgcaatgtaattttgcttttcagtctataaaaattttggtgcttagctgacttttcagattgtttgatattatctagaaaggtaagattgtttggtcactagattataattgaatgttctggtacaggagagggcggacaaggttttattaccgtggagaactgtggagacgatttccttggcgcattggctgatgcaacaaacaataatgatgattgggatgatctcaatgctatagagaatgaagcttgtggcaatttgaatggcatgatgaagcacggtgtaattgatgataaagaagttgaggtgagaactcctttgttcagacaggcagaatcctctgctcgacagactcgcatcaatctggactccttcgggttctcctcagatgatgactttgaaacgttggagtcccattgtgatcgttcagtcagtacccagaagaaggtatgatctcgaaacgctaaactgcacaatagaatctcgaattaatctataagctacctaccctgatttaccaatattggacttccatgcttttccactttcaaatatgtgcttttctgctgctaatctcatattcattgatctttatgtttcaaactccatattttcttttgaaggtgaacagaggaaacaatagatgtgagtcatccacttcaacttcaaacagagaaactctaagttatcagcagctgtatagcctagatgacatcaattttgcaaacgttgtcatctttggcaacaaaagctttaggcccctgcagtatgaggcctgtagggctgcagtaagcaacatggacacctttgtgcttatgccaacaggtggtgggaagagcttgtgttatcaggtccgtaaattctgcattttcatctagagttgacctttcagtacgcatgagtcgagacttagaaactccacctggaattacttgtcttgcagctacctgcaacactgcacccaggtgttacggttgttgtatgccctctactgtcacttattgaggatcaaattgtggcattaaacttcaagtttgctataccagcagcatttttgaactctcagcagacaccttcacagtcatctgcagtaatccaagagcttaggtaaacatttgattagatctctagcatatctaatagaattttgtgttgtaacttgcataatgcttcttaaacatatcacattactttagcttctcatcccatattctcatctcattgcagaagtggtaaaccgtcattcaaactcctctacgtcactcctgaaagaatggctggaaacagctcatttattgggatcctcataggtttacaccagagggtacaaatctcatattacatttttttaattgttactttgtttttttaatttaacctttattttatccgaggaagtgttgttaaactgcatttttcaatagggtttactggcgagatttgtgattgatgaagcccattgtgtaaggtaatgtttaaactccacgtttgtgatagttgtataagaagcagctttttttcctgacaatggtaccgatttccatgttaaaccagtcaatggggacatgacttccgcccagattaccgaggcctgggatgcctcaaacagaacttccctcgagtaccaattatggctttaacagctacagcgactgcatctgtctgcaaggttctagtcacactgatcctgttcctgcactactacttggatggaaattagtagctataatttggatgtactctgcaggacatactaagtaccttgaggatccctaatgcaacggtactcaagaggagctttgacagaacaaacctgaattatgaggtgattggcaagacaaaaactccacagaagcagctgggtgatctcctaaaagagcgtttcatgaacatgtctggtatcgtgtactgtctgtccaaaaatgaatgtgctgacactgccaagttcttgagggagaagtacaagataaaatgcgcacattaccacgctggcttggctgctcgtcaacgatccaatgtacaaggaaaatggcacagcggagaggtcaaagtcatttgtgcgaccatagcatttggcatgggaatagacaaacctgatgtggtatgtatttcagtcaatgttgggatataattccattcttttgctggtaggtgcaaagctttgatttggatatttcatcatgcagcgctttgttatccacaacaccatgtcaaaatcgatagaaagctactatcaggagtcagggagagcaggaagagacaatcttccggcacattgcattgtgttatatcagaaaaaggacctcggtcgaattgtatgcatgctgaggaattcagggaacttcaagagtgagagcttcaaggttgcaatggagcaagcaaagaaaatgcaaacatattgcgagctgaaggtaactctatgatttaattcttccaactaatgttattgtatgattcaaaatgctgcatcgcaacgacttgatgaatgaatttccctgcagacagaatgccggaggcaaactcttcttggccacttcggtgagcagtatgacaggcaaaggtgcaaacatggttgtagcccttgcgacaactgcataaagattccctcttgagagaacctcttccaaacctactgctgtgtgctgacatctatggtcttggtagaaggtcacttcctgagagccattcttacttatgatttggccttagcaccggaagtactgcctgaatgaaagcaaatgctgtccttgttgtaagatgcttgacatttttatcctgcagacattgcgcacgagagaaatcattactatttgcatgagaagtcttcattacatt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0672700, RefSeq:Os11g0672700