Difference between revisions of "Os11g0686900"

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(Created page with "{{JaponicaGene| GeneName = Os11g0686900| Description = NB-ARC domain containing protein| Version = NM_001075011.2 GI:297612404 GeneID:4351144| Length = 9335 bp| Definitio...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os11g0686900|
 
GeneName = Os11g0686900|

Revision as of 21:24, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os11g0686900

Description

NB-ARC domain containing protein

Version

NM_001075011.2 GI:297612404 GeneID:4351144

Length

9335 bp

Definition

Oryza sativa Japonica Group Os11g0686900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:29651805..29661139

Sequence Coding Region

29651805..29651973,29654963..29657037,29660315..29661139

Expression

GEO Profiles:Os11g0686900

Genome Context

<gbrowseImage1> name=NC_008404:29651805..29661139 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:29651805..29661139 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggctccgacctgtggtttgtggggcgccgtgttgaacctccccgggaggctcgacggggtcctccttcgccatggcagcattcttcccaagggtgccgaggaggagataccgctcatcaagcgagatctccatcttatgatctccatactcaatggctattacagcgagtcgccggagctggaggatgccacggcgacgacggtggcgaggaggaggtgctggacgaaggaggtgcgcgagctgtcctacgacatcgaggactgcatcgaccactacgagcacgctgccaccgccggttcagcgggcggtcgaaccgccagcggcgggattcctcctcgccgtaagatcaccaggcggcggtggcagcgtacgactcctctctggattccagagaggctgaagcagcggttatggatggctaacaagatcagagaattcagcctacgtgcccaggacgcgctcaaacgccatgccatgttctgcagcagcgtcggtggcaatggcatagccaccagtactgcttcttcctctactgccgctacaggtgacgcatcgtcttcttcttctaccatatgttggcacaccacgcggttcagggaacgcgacttctgcgtccctcatgtcggtatcaacgtcgccatgaacaagctcgaagactggctcactgcgtgtgatgatgaagatcagaagaggctgagggtggtgtccattgtaggagtcggaggaataggcaagaccacgctcgccaacgagctgtaccgcaagcttcggcggcagttcgaatgctgggcatttgtgcgttcctcccagaagcctgattgtgctttaccagatggtacaagtagcagcagagtactaacaacgacacaatatgatgatctagcagtccaatcatgtggttatgacaccaagtatgttttcaagatgaaatctctttctcaacacgactcaagatatttatttttcaatacagtttctggcagtcgctttatttattctccaggatccactgaagtttcagatgatattataaggaaatgtggtagtttgccactagctattgtatctattaccagtattctagagaagtcgaggaaaatggagcaatggggttatgtaaacaaatccttaggctacaatttgatgaaaaaccctaccttggaggggataaaacaagtgttggaccttagttacaataatctttctgagcatttgaagccatgtgtgctgtatcttagtatatatcaagaggactacttaatttgtaaggatgatttggtgaatcaatggttggctgaagggcttatctgtgcaacaaaagatcacactaaggaagaaatttcagaggcctgttttggtgagcttgtcagtagtaaaatgatccaaccagtacatattgatggcaatggtgacgttatgtccttcgttattcaacatatggtactcaattttattagttacaagtctatagaagagaacttcgtcactgtaatacatcattctcagacagctaccaaactttctgacaaggttcgtcgattgtctcttcactttggtaatgttaaagatgcaaagttaccaataaatatgagactttcacaagttcgaacacttgccttctttggggcctacaagtattggtggcgttcaatcaaagatcaattcccacttctccaagttcttatccttcatttttggcatgatgaggatattatcagttttgacctcactataatttcacagctttttcgactgaaatatttaaagatcacatctgatgttactttagaactgcaaaccaagacaagaggcctgcaatgtttggaaacacttaagatagatgcaagaataagtacagctccattagacacaactcatttgtcgggtttactccatctgagtcttcctgctgatacaaacttggccaatggaattggccacatgacatcgcttcacacatttgggtattttgatctcagctataactctgtagagaacgtgcttagccttggcaagctgaccaatctccgaaatcttcagctcacttgttccaccatacgacctaacagtctggagattaaattgcagtgcctgggtttcattcttcaaaaactcagcaacctcaagtctgtaactatgtcaactgcaggctcctcttgtgtaaattctactgatgcgagttctgcaaacgttagcgttagaatttctggtgatggcttgagcagcatgtcctctcccccggcacttgttgagaggcttgagttgttgccacgaatttgcatattctcctacctcccgaagtggatcagtctactcagcaagctccgtattttgaagattggggtaagggaactagtgagaaatgatattgatgttctcatgggattgcgtgctctcactgatctctcgctacatgtccacaccaagcctacagaaattattttctttggcggtataggattcaaggctctcaagtacttaaagatcaattgctgtgtagcttggttgaaatttgatatgggtgcaatgcatagtctctataagctcaagcttggttataatgtcgatggagttgatcaagaaagtacgataccagttggcattcagtacttatatggcctcaaagagatctccgtaaaaattggtggtgctgatcctgagaaatacgacagaagggctgaagagttggcgttcatgatcgactcaggtctgcatgacagatgcatgagcatcactttacaatgcgtgaggcagatgtttgatttcaacgaagataagagtagcctgacacatgaagaacaaaggaaattgaaacaacaggagatcctggaggatgactctgacgaagaatatgacgaaattattcaggactctggggagcaagaagtgaaacagtcaaccttatctgaatgggacattgtgcacctgttgagaaacaagctgaacaaccagcaggatggcacgacgtgccatttccccgttgtcgcctcctactatgttgacacgtgtcagctcacaggtggttcctcctcagtcacatccatcaaagtattttcaacgtaa</cdnaseq>

Protein Sequence

<aaseq>MEAPTCGLWGAVLNLPGRLDGVLLRHGSILPKGAEEEIPLIKRD LHLMISILNGYYSESPELEDATATTVARRRCWTKEVRELSYDIEDCIDHYEHAATAGS AGGRTASGGIPPRRKITRRRWQRTTPLWIPERLKQRLWMANKIREFSLRAQDALKRHA MFCSSVGGNGIATSTASSSTAATGDASSSSSTICWHTTRFRERDFCVPHVGINVAMNK LEDWLTACDDEDQKRLRVVSIVGVGGIGKTTLANELYRKLRRQFECWAFVRSSQKPDC ALPDGTSSSRVLTTTQYDDLAVQSCGYDTKYVFKMKSLSQHDSRYLFFNTVSGSRFIY SPGSTEVSDDIIRKCGSLPLAIVSITSILEKSRKMEQWGYVNKSLGYNLMKNPTLEGI KQVLDLSYNNLSEHLKPCVLYLSIYQEDYLICKDDLVNQWLAEGLICATKDHTKEEIS EACFGELVSSKMIQPVHIDGNGDVMSFVIQHMVLNFISYKSIEENFVTVIHHSQTATK LSDKVRRLSLHFGNVKDAKLPINMRLSQVRTLAFFGAYKYWWRSIKDQFPLLQVLILH FWHDEDIISFDLTIISQLFRLKYLKITSDVTLELQTKTRGLQCLETLKIDARISTAPL DTTHLSGLLHLSLPADTNLANGIGHMTSLHTFGYFDLSYNSVENVLSLGKLTNLRNLQ LTCSTIRPNSLEIKLQCLGFILQKLSNLKSVTMSTAGSSCVNSTDASSANVSVRISGD GLSSMSSPPALVERLELLPRICIFSYLPKWISLLSKLRILKIGVRELVRNDIDVLMGL RALTDLSLHVHTKPTEIIFFGGIGFKALKYLKINCCVAWLKFDMGAMHSLYKLKLGYN VDGVDQESTIPVGIQYLYGLKEISVKIGGADPEKYDRRAEELAFMIDSGLHDRCMSIT LQCVRQMFDFNEDKSSLTHEEQRKLKQQEILEDDSDEEYDEIIQDSGEQEVKQSTLSE WDIVHLLRNKLNNQQDGTTCHFPVVASYYVDTCQLTGGSSSVTSIKVFST</aaseq>

Gene Sequence

<dnaseqindica>9167..9335#4103..6177#1..825#atggaggctccgacctgtggtttgtggggcgccgtgttgaacctccccgggaggctcgacggggtcctccttcgccatggcagcattcttcccaagggtgccgaggaggagataccgctcatcaagcgagatctccatcttatgatctccatactcaatggctattacagcgagtcgccggagctggaggatgccacggcgacgacggtggcgaggaggaggtgctggacgaaggaggtgcgcgagctgtcctacgacatcgaggactgcatcgaccactacgagcacgctgccaccgccggttcagcgggcggtcgaaccgccagcggcgggattcctcctcgccgtaagatcaccaggcggcggtggcagcgtacgactcctctctggattccagagaggctgaagcagcggttatggatggctaacaagatcagagaattcagcctacgtgcccaggacgcgctcaaacgccatgccatgttctgcagcagcgtcggtggcaatggcatagccaccagtactgcttcttcctctactgccgctacaggtgacgcatcgtcttcttcttctaccatatgttggcacaccacgcggttcagggaacgcgacttctgcgtccctcatgtcggtatcaacgtcgccatgaacaagctcgaagactggctcactgcgtgtgatgatgaagatcagaagaggctgagggtggtgtccattgtaggagtcggaggaataggcaagaccacgctcgccaacgagctgtaccgcaagcttcggcggcagttcgaatgctgggcatttgtgcgttcctcccagaagcctgatgtaaggaggattctcatcagcatcctctcacagctgcgcttgcagcagccacctgaaagttggaaggttcatagcctaatttccagtattagggcgcatctgcaggataagaggtacaacctccgttctaaattagtggtcgctttgatttttttcgtgcaacgtttaaccattcgacttatttgaaaaattagtgcaaatataaaaaatgataagtcatacttaaagttttttttgataataaagcaaatcacaaacaaaacaaataataattccataattttttgaaacatttaccatttctgttgtcagctattttctatttttttacaactgtgcaaacaaatgaattaacatgcaatcgagttcatgaagtccatgttgccattacttacacacacacacaaatttgcaatactatgaacttagcacatatgccatctagtcccggttggtggagaaaacttttttactccgggttggtaaccccctttagtccagggttccaaccgggagtaggaatccgggactaaagatgcccatctttagcatactggtgaagaaatcttttttactcctggttggtaaccccctttagtcccgggtttccaaccgggagtagaaatccgggactaaagatgctcatctttagcacactggcgaagaaatcttttttactcccggttggtaaccccctttagtcccgggtttccaactgggagtaggaatctgggactaaagatgtcccggttgaaataaccgggactaaaatccatctttaatcccaattggtaacaaaaaccgggactaaagagagggatctttagtcctggttggtagagagggatctttaatccccgttagtgttaccaaccgggactaaagagagggtagcggcagtccagatggtttccttttctttttttttcttttttattttctcccaaatcgagtggcatgcatatcccaaatcaaaccccaaatccccaaatcaaagtaacatcccaaatcttaaagttacttatacacacaaatcaaatacatcacaaatcctaaaaaaattacacacaaatcaaatacatcacagattatacatcttagatccatacaatgaatcacaaaattatacatctcagtgaatcacaaattatcaaaaaaagaaaagaaaagaaaacaacgttggctgtcggctgccgccgcctgcggccccgctggccacaggccacctgcccgccaccacccgccaaccgcctgcccgccgccgcagtgggcgaccctgcctgccgccgccctgccgccgtctgccgcagccaccgcctgcggccccgccggccgccggtcgcctgcccaccgccgccgggaggaaaggggggataggagaggggaggagaggaggaaggggaggagggggaggagatctgtgtaagatctatgtaggagaggggaggggaggatgaaggggaggatcaatctatgtgaggaagtggttgcgattgtggaggagaggataattgctagggattatatactacgcgttaaattttagttccagttggtaataccaattaagagtaaagatctacatgatctttagtcccggagtggtgatctttagttagatttctgattttgggaggaatttgaattgaaattttccatttgaatttagagaatttggggaattcatggaaggaaatctgattttaaatgttttgtgcattcaaattattatttcaatccagtttatgtgtggggaattaagagaaaaggatttggaaggatttccgaataactaaatgaattggaataccaaatttataaaaatctaggtgaaaggatcttgatgttgcctaatgggaaggaatatgtgttgcttaagacttcttcgcagtagatcagtacatggccaggcagaacttctagtcaaatagccaggatttctatctttgtgtccagatgttccgatcaacagaaaacaaatctctcaaaggggatactgttggatcgttaatggtctttcccatctcaaaagctagctaatgagttgaggagctcccccacttatatattaggtattttgcatttccacactaaacttctaagtcaaatggctaggatttctagcttgtgtccagatgttccggtcaacaaaaaacaaatctctcaaaagggatactataggatcgtaaaaggcatttcccaccctaaagctagctaataaggtaaggagctccctcacttgtatattaggtcttttactctttcacaaccaatgtgggactattcaacaatctcctccttcacacattggggactctcagccgttcattgccccttcacaaattggtgtcccttagccgttcaccgcccttcactgtacaccgacgatacctcaggtatacaagccccgcagacaccaacggttcatcaggccttctgtgacattctagcctagggcttaataggattaatagaatactcataccaacaagttacaactttttttccggaagccgatctccagagaactctgaggttaagcgtgcttggcttggagcaattaattttgggatgggtgtgcttggcctggagcaattttgggatgggtgaccgactgggaaattcttctcgggtgcacacgagtgaggacaaagtgtgtagaaaagacttgtgttggtctgtgaaggcaatctatgtccaagaaaagttgccagatgtaagtgggctcggcgggctcgacctgggagaggcgggacgttacaaaggaggaggggaggcatgtgcgtctgcctttttcttaatctttggtccccgttgatataaacaaccgggactaaagatagtgggggaggacctgacaacgttttgaactgggactaaaaatgattaccaaccgggactaaagattataaagtgtcgtgccgcttttgaaccggggctaaagatcttctttagtcttggttcctattcaaaccgggactattgtagttttcggatcaccgagcaaaaatcatttctccagtagtgcattaaaaaatacactgtaaaatttggcgatgagttcatactagctttagtttttacttagtacttcccccgtttcatattataaaactttcacacattgcccatgtttgctagaaagtcttataacctgaaacagagggagtatttattactagtttgacacaatgcatttattgtacaaaaaatatttgacaggtacttgatcatagttgatgatatatgttttatatcaacatgggatattattaagtgtgctttaccagatggtacaagtagcagcagagtactaacaacgacacaatatgatgatctagcagtccaatcatgtggttatgacaccaagtatgttttcaagatgaaatctctttctcaacacgactcaagatatttatttttcaatacagtttctggcagtcgctttatttattctccaggatccactgaagtttcagatgatattataaggaaatgtggtagtttgccactagctattgtatctattaccagtattctagagaagtcgaggaaaatggagcaatggggttatgtaaacaaatccttaggctacaatttgatgaaaaaccctaccttggaggggataaaacaagtgttggaccttagttacaataatctttctgagcatttgaagccatgtgtgctgtatcttagtatatatcaagaggactacttaatttgtaaggatgatttggtgaatcaatggttggctgaagggcttatctgtgcaacaaaagatcacactaaggaagaaatttcagaggcctgttttggtgagcttgtcagtagtaaaatgatccaaccagtacatattgatggcaatggtgacgttatgtccttcgttattcaacatatggtactcaattttattagttacaagtctatagaagagaacttcgtcactgtaatacatcattctcagacagctaccaaactttctgacaaggttcgtcgattgtctcttcactttggtaatgttaaagatgcaaagttaccaataaatatgagactttcacaagttcgaacacttgccttctttggggcctacaagtattggtggcgttcaatcaaagatcaattcccacttctccaagttcttatccttcatttttggcatgatgaggatattatcagttttgacctcactataatttcacagctttttcgactgaaatatttaaagatcacatctgatgttactttagaactgcaaaccaagacaagaggcctgcaatgtttggaaacacttaagatagatgcaagaataagtacagctccattagacacaactcatttgtcgggtttactccatctgagtcttcctgctgatacaaacttggccaatggaattggccacatgacatcgcttcacacatttgggtattttgatctcagctataactctgtagagaacgtgcttagccttggcaagctgaccaatctccgaaatcttcagctcacttgttccaccatacgacctaacagtctggagattaaattgcagtgcctgggtttcattcttcaaaaactcagcaacctcaagtctgtaactatgtcaactgcaggctcctcttgtgtaaattctactgatgcgagttctgcaaacgttagcgttagaatttctggtgatggcttgagcagcatgtcctctcccccggcacttgttgagaggcttgagttgttgccacgaatttgcatattctcctacctcccgaagtggatcagtctactcagcaagctccgtattttgaagattggggtaagggaactagtgagaaatgatattgatgttctcatgggattgcgtgctctcactgatctctcgctacatgtccacaccaagcctacagaaattattttctttggcggtataggattcaaggctctcaagtacttaaagatcaattgctgtgtagcttggttgaaatttgatatgggtgcaatgcatagtctctataagctcaagcttggttataatgtcgatggagttgatcaagaaagtacgataccagttggcattcagtacttatatggcctcaaagagatctccgtaaaaattggtggtgctgatcctgagaaatacgacagaagggctgaagagttggcgttcatgatcgactcaggtctgcatgacagatgcatgagcatcactttacaatgcgtgaggcagatgtttgatttcaacgaagataagagtagcctgacacatgaagaacaaaggaaattgaaacaacaggagatcctggaggatgactctgacgaagaatatgacgaaattattcaggactctggggagcaagaagtgaaacagtaataaattttctaacttcctttttttggtgatattttttaaccttttttactagaagtttttattataattctaaaaggtccaaataaaaaaattcctatgttaattggtagaaagaaaatatctaagagttctcactttaaccagagaaaaaaaatataagatcgaccaattaaattggttaatctggacatgaaaggcacgtacttattagataatggataatggacaaaaaaaaaaggttatggattttcatccctcgaggagatatcccttcattgtttatatatcatctaaatagttatcaaaaaaaattgacaacatagattaatatgaaatatattactccacaaacatgcaagatcaaattcaacttctacaagttgcaacaaaaataacaaattaaattgaaaatagttatcgtacatttgcatctatatttgttatttttgttaaaacttgcagaagttaaattttaacttgcatgtttgtgaagtaatatacttcatattaatctatcttgccaattttttttcaatttttttgataactttttaggtggcatgcacgaaataaggggatatcccctcgagggatgaaatcactttcccaacaaaaaaaaaaacttccttcgctggcatggctcagaaaaaaaaatttcaaatcaacttatcaactttttagcactatttaattcatttaatttttttatcttgaatgattattataaccttattttcatccctcttatatcatctttaaagaattcgccctaagatgcctcagatttaattacttcaagacacatactccctctttcaaaaaaaaaaaaaaaggcaaaccgtgggttcccgtaccaacgtttgactgtccgtcttatatgaaatttttttataattagtattttcattgtatttagatgataaaacatgattaatactttatgcgtgacttatctttttaattttttttataattttttcaaataagacgaacggtcaaacattggacacggaaaccagggtttgtctttttttgtgacggagggagtatggttcaagatatgaagttttccatgctatcatggacattgcttcattctctctttatttttctccgtttcaccacacttgaatttttcaggatttcaaaatattgaaaaagatttaatttttctaagtatactgtatacattatgctactcatttcacaatacttaaacttctatgaatatactactatcaaataatgttagaacttcagcgaatcataaattcttaaaatacttgtaatatataaaaaaaatatgttacatgacaaatataacaacatatctttcgttcatagtaatatgatattttagaagttttggcacttgaggttgaaatagtaatggttattttggaacgaaagaagtatatactccctccgttttaaaaaaaggcaaaccctggatttccgtgtccaactttgactgtccgtcttatatgaaatttttttgtaatttatattttcattgttgttagatgataaaacatgattaatattttatgcgtgacttgtcttttaatttttttcataattatttgaaataagacagacggtcaaacgttgggcacggaaaccagggtttgtcttttttggatggagggacggaaggagtacgtattcaatttcaaataactagcatggaggcccgcgcagattgcgcggctagcatcattatattttctctcatataatagcatatatgttttctcattatattattaaaatatattacaatgacaacataattttaaattttgcaataactttacgaaactactaatgtgtaatattcatattgtattttatatacgtgttagttattaattatttttactatcaaattttagttatctataaattatatatattcctttatggactctagactcgtcttttatttttttttaattctaaatttttattatttctaattgtatttctatgtggactctaaactcatctttcaatattctttaatttttaatttcaaatttcagttacttctaaattgtattcctatattgactttaaactcttcttcccatgtttttcttaatttcgaattttagttatttgtaaattgtatttttatacggactctaaactctacttttaattttatcacatttattccgaattttagttagtttcaaattcatgtatggactctatactctacttctaatattccttattttttaattccaaatttcctttttttcttcattgtatttctatatggactctatactttacttctaatattccttattttttaattccgaatttcagttattttctaattgtatttctatatggactctagtcttctcttttaatattccttattttttaattccgaattacagctatttcctaattgtatttctatatggactctagtatcctcttttaatattccttattttttaattctgaatttcagctatttcctaattgtatttctatatgaactctatactctacttctaatattccttatttttaattccgactttcagttatttcctaattgtatttctatatggactctagtctcctcttctaatattccttattttttaattccgaatttcaactatttctaaattgtatttctatatggactctagtctcctcttctaatgttccttaatttttaattccaaatttcagctatttctaaatgtatttctatatggactctgctttttctttttctccgattaacgtgagaatttctaggccatgagagcaaacgtggaggctcctttttctattcctttaataatataatagatatggcgttatatatttttttaaagaaaaaacattatgctcgagctaactgtccgttatctttaaagaaaatggtcatgtatatatgtttctgatctctttttttttttgaaaggaaatatatgttgctctcttcaggtcaaccttatctgaatgggacattgtgcacctgttgagaaacaagctgaacaaccagcaggatggcacgacgtgccatttccccgttgtcgcctcctactatgttgacacgtgtcagctcacaggtggttcctcctcagtcacatccatcaaagtattttcaacgtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0686900, RefSeq:Os11g0686900