Difference between revisions of "Os11g0708900"

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(Created page with "{{JaponicaGene| GeneName = Os11g0708900| Description = Similar to Phenylalanine ammonia-lyase (EC 4.3.1.5) (Fragment)| Version = NM_001075097.1 GI:115486842 GeneID:4351235|...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os11g0708900|
 
GeneName = Os11g0708900|

Revision as of 21:27, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os11g0708900

Description

Similar to Phenylalanine ammonia-lyase (EC 4.3.1.5) (Fragment)

Version

NM_001075097.1 GI:115486842 GeneID:4351235

Length

2255 bp

Definition

Oryza sativa Japonica Group Os11g0708900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:30821052..30823306

Sequence Coding Region

30821052..30821425,30821578..30823306

Expression

GEO Profiles:Os11g0708900

Genome Context

<gbrowseImage1> name=NC_008404:30821052..30823306 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:30821052..30823306 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagtgtgagaccggtgtcaacggctcagggccgcgcggcagcgaccccttgtactggggcaaggcggcagagggtgttgcggggagccacctcgaggaggtgaagaggatggtggttgagtaccgcgcgccgctggtgaagatcgacggcgccatgctcagcgtcgccaaggtggcagccgtcgccggcgaggccgcccgggtgcaggtggtgctggacgaatccgcacgaccccgcctggaggctagccgcgagtgggttttcgaaagcaccatgaatggcaccgacacgtacggcgtcaccaccggcttcgggggtgccgcccaccgccgcaccaaggagttcgccgcgctccagaaagagctgatccgatacctcaacgccggcgtctttggagccagccgcagcgacggctacacgctgccgacggaggtcacgcgcgcagccatgctcgtgcgcatcaacaccctcacccagggctactcgggcatccgcttcgagatcctcgaggccatcgccaagctgctcaacgccaacgttacgccgtgcctgccgctccggggcaccatcaccgcgtccggcgacctggtccctctgtcctacatcgccggcctaatcaccggccgccacaactccgcggcggtggccccggacggcaccaaggtggacgccgccgaggcattcaggatggccggcatcgagcacgggttcttcgcgttgcagcccaaggaagggctcgccatcgtcaacggcacggccgtgggctccggcctcgcggcgatcgtgctcttcgaggccaacgtcctcgccgtccttgccgaggtcctctcggcggtgtactgcgaggtaatggccggcaatccggagtacaccgaccacctcatccacgcgctgaagcaccaccctggacagatcgaagctgcggccatcatggagcacatactggaaggcagctcctacatgaagaagcttgccaaggacaaggagcagggccagggcgagcttgaccggctgacgaagctgaagcaggacaggtacgccatccgcacggcgccgcagtggctcggcccgcaggtcgaggtcatccgcttcgccaccaagtccatcgagcgggagatcaactccgtcaacgacaacccggtcatcgacgtcgcccgccgcaaggcgctccacggcggcaacttccagggcactcccgtcggggtgtccatggacaacactcgtctcgccatcgctgccatcggcaggctcatgttctcgcagttctccgagctcgtcagtagcttctacagcaacggccttccctccaacctgtccggcgggcgcaacccgagcttggactacggtttcaatggcgccgaggtcgccatggcgtcctactgctctgagctccagttcctcgccaacccggtgaccaaccatgtgcagaccgcggagcagcacaaccagagcgtcaactctctcggcctcatctcctccaggatgactgcagaggccgtcaccatcctgaagctcatgtcctctactttcctcatcgcactgtgccaggccgtcgacctgcgccaactcgaggagagcatcaaggccgctgttaacaagtgcgtgacgaatgtcgccaagaaatccctgaccctggccatggacgacgacgaccatctgctagcgctgctcggcgctgctatcgaccgcgtggcggtgttcacgtacgcagaagacccatgcagatccagcttgccactcatgcagaagctccgcgcggtgctcatggagcatgcgctggccaataacggtgacatcctcctggccaaggtggctgagttcgagcagcagctccgcgcggtgctccccgacgaggtggaggccgcacgcgccgctgtagagagcggcacggccccgaacaggatctccgactgccgctcgtacccgctgtacaggttcgtgcgcaaggagctcggcgccgagtacctgaccggcgagaagacgcggtctcccggggaggaggtggacaaggtggtgatcgccatgaaccagcacaagcacatccatccactgctggagtgcctcagcgagtggaaaggcgcgcccctgccacttagctga</cdnaseq>

Protein Sequence

<aaseq>MECETGVNGSGPRGSDPLYWGKAAEGVAGSHLEEVKRMVVEYRA PLVKIDGAMLSVAKVAAVAGEAARVQVVLDESARPRLEASREWVFESTMNGTDTYGVT TGFGGAAHRRTKEFAALQKELIRYLNAGVFGASRSDGYTLPTEVTRAAMLVRINTLTQ GYSGIRFEILEAIAKLLNANVTPCLPLRGTITASGDLVPLSYIAGLITGRHNSAAVAP DGTKVDAAEAFRMAGIEHGFFALQPKEGLAIVNGTAVGSGLAAIVLFEANVLAVLAEV LSAVYCEVMAGNPEYTDHLIHALKHHPGQIEAAAIMEHILEGSSYMKKLAKDKEQGQG ELDRLTKLKQDRYAIRTAPQWLGPQVEVIRFATKSIEREINSVNDNPVIDVARRKALH GGNFQGTPVGVSMDNTRLAIAAIGRLMFSQFSELVSSFYSNGLPSNLSGGRNPSLDYG FNGAEVAMASYCSELQFLANPVTNHVQTAEQHNQSVNSLGLISSRMTAEAVTILKLMS STFLIALCQAVDLRQLEESIKAAVNKCVTNVAKKSLTLAMDDDDHLLALLGAAIDRVA VFTYAEDPCRSSLPLMQKLRAVLMEHALANNGDILLAKVAEFEQQLRAVLPDEVEAAR AAVESGTAPNRISDCRSYPLYRFVRKELGAEYLTGEKTRSPGEEVDKVVIAMNQHKHI HPLLECLSEWKGAPLPLS</aaseq>

Gene Sequence

<dnaseqindica>1..374#527..2255#atggagtgtgagaccggtgtcaacggctcagggccgcgcggcagcgaccccttgtactggggcaaggcggcagagggtgttgcggggagccacctcgaggaggtgaagaggatggtggttgagtaccgcgcgccgctggtgaagatcgacggcgccatgctcagcgtcgccaaggtggcagccgtcgccggcgaggccgcccgggtgcaggtggtgctggacgaatccgcacgaccccgcctggaggctagccgcgagtgggttttcgaaagcaccatgaatggcaccgacacgtacggcgtcaccaccggcttcgggggtgccgcccaccgccgcaccaaggagttcgccgcgctccagaaagagctgatccggtacgactttaattagctgtacactactagtatacttgagtattttattttatactactaattgctcactgtcacaagctatatataatgctagtaattaattcgttcattgggtgggtggttctgaatgaaaatcaaatacttcattaaagatacctcaacgccggcgtctttggagccagccgcagcgacggctacacgctgccgacggaggtcacgcgcgcagccatgctcgtgcgcatcaacaccctcacccagggctactcgggcatccgcttcgagatcctcgaggccatcgccaagctgctcaacgccaacgttacgccgtgcctgccgctccggggcaccatcaccgcgtccggcgacctggtccctctgtcctacatcgccggcctaatcaccggccgccacaactccgcggcggtggccccggacggcaccaaggtggacgccgccgaggcattcaggatggccggcatcgagcacgggttcttcgcgttgcagcccaaggaagggctcgccatcgtcaacggcacggccgtgggctccggcctcgcggcgatcgtgctcttcgaggccaacgtcctcgccgtccttgccgaggtcctctcggcggtgtactgcgaggtaatggccggcaatccggagtacaccgaccacctcatccacgcgctgaagcaccaccctggacagatcgaagctgcggccatcatggagcacatactggaaggcagctcctacatgaagaagcttgccaaggacaaggagcagggccagggcgagcttgaccggctgacgaagctgaagcaggacaggtacgccatccgcacggcgccgcagtggctcggcccgcaggtcgaggtcatccgcttcgccaccaagtccatcgagcgggagatcaactccgtcaacgacaacccggtcatcgacgtcgcccgccgcaaggcgctccacggcggcaacttccagggcactcccgtcggggtgtccatggacaacactcgtctcgccatcgctgccatcggcaggctcatgttctcgcagttctccgagctcgtcagtagcttctacagcaacggccttccctccaacctgtccggcgggcgcaacccgagcttggactacggtttcaatggcgccgaggtcgccatggcgtcctactgctctgagctccagttcctcgccaacccggtgaccaaccatgtgcagaccgcggagcagcacaaccagagcgtcaactctctcggcctcatctcctccaggatgactgcagaggccgtcaccatcctgaagctcatgtcctctactttcctcatcgcactgtgccaggccgtcgacctgcgccaactcgaggagagcatcaaggccgctgttaacaagtgcgtgacgaatgtcgccaagaaatccctgaccctggccatggacgacgacgaccatctgctagcgctgctcggcgctgctatcgaccgcgtggcggtgttcacgtacgcagaagacccatgcagatccagcttgccactcatgcagaagctccgcgcggtgctcatggagcatgcgctggccaataacggtgacatcctcctggccaaggtggctgagttcgagcagcagctccgcgcggtgctccccgacgaggtggaggccgcacgcgccgctgtagagagcggcacggccccgaacaggatctccgactgccgctcgtacccgctgtacaggttcgtgcgcaaggagctcggcgccgagtacctgaccggcgagaagacgcggtctcccggggaggaggtggacaaggtggtgatcgccatgaaccagcacaagcacatccatccactgctggagtgcctcagcgagtggaaaggcgcgcccctgccacttagctga</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0708900, RefSeq:Os11g0708900