Difference between revisions of "Os09g0361400"

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(Created page with "{{JaponicaGene| GeneName = Os09g0361400| Description = Outer mitochondrial membrane protein porin (Voltage-dependent anion- selective channel protein) (VDAC)| Version = NM_...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0361400|
 
GeneName = Os09g0361400|

Revision as of 20:57, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0361400

Description

Outer mitochondrial membrane protein porin (Voltage-dependent anion- selective channel protein) (VDAC)

Version

NM_001069518.1 GI:115478778 GeneID:4346851

Length

3409 bp

Definition

Oryza sativa Japonica Group Os09g0361400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:12410324..12413732

Sequence Coding Region

12410427..12410472,12410600..12410667,12411604..12411714,12412088..12412174,12412262..12412470
,12413115..12413418

Expression

GEO Profiles:Os09g0361400

Genome Context

<gbrowseImage1> name=NC_008402:12410324..12413732 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:12410324..12413732 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggggccaggcctgtacccggagatcggcaagaaggccagggatctgctgtacagggactaccagaccgaccacaagttcaccctcaccacctacaccagcaatggcgtcgcaatcactgctaccagtacaaagaaggctgatctgatttttggtgagatccaatcacagataaagaacaagaacatcactgtagatgtgaaagcaaactcagactcaaatgttgttactactgtaaccgttgatgagctaacaccaggattgaagtccatcttgagctttgctgttccggatcaaagatctggaaagtttgagcttcaatactcgcatgattatgctggtgttagtgcaagtattggtttgactgccagtcctgtagtcaatctctccagtgtttttggaaccaaggctcttgctgttggtgctgatgtctcacttgataccgccacggggaacttgaccaaatataatgctggattgagcttcagtaatgatgatcttatcgcgtcattgaacctgaacaacaagggagatagtctcactgcatcttattaccacattgtgaaccattcggccacagctgttggagctgagctgacccacagcttctcgagcaacgagaactccctcaccttcggtacccagcacactctcgacccgcttaccgtcgtgaaggcccgcttcaacaattccggcaaggccagcgcgctgctccagcacgagtggaggccaaagtctgtgtggaccatctcagcagaagttgacaccaaggccattgacaagagctcaaaggtcggcattgcggtggccctcaagccttga</cdnaseq>

Protein Sequence

<aaseq>MVGPGLYPEIGKKARDLLYRDYQTDHKFTLTTYTSNGVAITATS TKKADLIFGEIQSQIKNKNITVDVKANSDSNVVTTVTVDELTPGLKSILSFAVPDQRS GKFELQYSHDYAGVSASIGLTASPVVNLSSVFGTKALAVGADVSLDTATGNLTKYNAG LSFSNDDLIASLNLNNKGDSLTASYYHIVNHSATAVGAELTHSFSSNENSLTFGTQHT LDPLTVVKARFNNSGKASALLQHEWRPKSVWTISAEVDTKAIDKSSKVGIAVALKP</aaseq>

Gene Sequence

<dnaseqindica>104..149#277..344#1281..1391#1765..1851#1939..2147#2792..3095#ctctcctctcccgcaacctccacctcctatccgccgccgccttcttcttcctcctcccacccgcgcaagctatccgccgccgcatcgcgtcgtcgacgaggagatggtggggccaggcctgtacccggagatcggcaagaaggccaggggtgagcggccgcgtccccttctcttgtgggattagagctttggtggttcttggatttgattttctttttgtttgtttgtttgtttgtttgtttgttgttgatgatgagttgtttgtttttgctgcagatctgctgtacagggactaccagaccgaccacaagttcaccctcaccacctacaccagcaatggcgtcgtaagtgctctcgagttttttttgttgttgacttgttgtatgtaagaggctttcttgatttatttgtgtgatttactgcccctacctgctgttgttaatgtgtgatgtgtgatctttgcgatggattagtttatttatagtccatagttagtggattgtaggaggtatatgaatgccgggagatttgccaggtctcgcttgtgccttggtttgtttcgcttgtttaggaggattagcaatgtacctgttgcttagtgagacgcgggatttgtaagctaaaagattgttcgagagattatctcttggatagtggtaaaatgatttaggagtaatctatatcctaggtaggtcttttttgttattgataatgataggtagggagttgggttaaaacaacagcatgcttggcaactgattggtggtttgattgttttgaaagagggttgaacatgaacttgttggttgcagaacattagtttaattagtcttctttatttaagaaagcaagtctattactgaagcagggaggactcttgtttggtacattatgcaattattatactttgcccttggtatgcttacggtttttaaagaaaactaaaagttatgggagaaatcccttcatgcaagtgcttgtaagtggaatagttgaagtgtgctcctgctaagagaagcattgatgaaagtgaattttgtgcataataaacacaaaactgtcttgtattgttggaataacctaaactactaaaggctgtactaatcaattacatgttcgtaatgatagcttgtaaaggtggtgactggttggggtgtatatttgagggttatcttagtgttgcttttcctgtatgattgtaaattttgatacaatcatgcctgttgtggcagctatgatgttatttgtttagctctttgacttgttattccttgatgcaggcaatcactgctaccagtacaaagaaggctgatctgatttttggtgagatccaatcacagataaagaacaagaacatcactgtagatgtgaaagcaaactcagactcaaatgtatgactctttctctcacgcacacacatcgtgtgcacacgcttgcgcacacatacacacagataaacgtgcacacaactaatttacattttgtgattgccttctacattgcaatggtctgaaatccttgttctatatgaaatacacagacacacccaaataaacttgcacacaacttatttagattttgtggttgcctgctacattgcaatggtttgaatccttgttctatatgaaatgattttacgttgccatctgacgaattcgtaccgaatatgctactagttttgattgcattgagcaatatgttctgtgattagctgttatgccatgctctcccttttttgtattgactgcttctatctttggccaggttgttactactgtaaccgttgatgagctaacaccaggattgaagtccatcttgagctttgctgttccggatcaaagatctggaaaggtaatttgctcatgcaccacattactgcttattttcaatgaaaccttcttggttggttgtcctcactctccctctttttggtttcagtttgagcttcaatactcgcatgattatgctggtgttagtgcaagtattggtttgactgccagtcctgtagtcaatctctccagtgtttttggaaccaaggctcttgctgttggtgctgatgtctcacttgataccgccacggggaacttgaccaaatataatgctggattgagcttcagtaatgatgatcttatcgcgtcattgaacctgtaagtgtcttgggcttacagtgaattgttaccttcatcatcttctaacttcataactctttaagttattgtgaaatccacatttgtacatcctattgaccattccatctgtcccgctagaagcaatgtgtctgttcttgccatctgaacaacttatagcccaaatagagtttatatatatatatttttatcaggtttcatgatctacctctttcaataatggtaggaaacatgagataaaatagagtaaacttatcaatgttaatatcttattgtagttgacatgtttccttgttctcgttaactacagagagcaagataatgtttacaagccatgtttgtgatctccattcaaaagccgctactattttagttgaccatatacgatcaagatactttgcacaatacacaccttatcaacattgaaaactgacgtttggtgttacattcttttattaaaatcaaacaaatatgttgaatctagaaataagtatcttggcttgcatctcatatcaactaatcatcaatctctattatcctcatctttagatagatataactgatcccatatgtaggacttgctagttgattgtattgtttaccaaaaatccaaaatccataattgatttgaaactgtcttgcaggaacaacaagggagatagtctcactgcatcttattaccacattgtgaaccattcggccacagctgttggagctgagctgacccacagcttctcgagcaacgagaactccctcaccttcggtacccagcacactctcgacccgcttaccgtcgtgaaggcccgcttcaacaattccggcaaggccagcgcgctgctccagcacgagtggaggccaaagtctgtgtggaccatctcagcagaagttgacaccaaggccattgacaagagctcaaaggtcggcattgcggtggccctcaagccttgatttttctcagggtgtacttacatttcaaagatgaaattgagatgagttgaaaaacatcttggcgcatgcgcatcttttggttgttgcagtctattagattccaagaactgccatgtttaatttgaggattttttttttctgttatcggtgttagcacttgttcaatgagcaacccttgcaccccaataattcaagctcggcaaaattatgaacttgcttctaggtgacaattttttgttactattttcacactgtcattgtccacactgtgcttgtggttatggtgctccaattaaactaactgtttatatgct</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0361400, RefSeq:Os09g0361400