Difference between revisions of "Os12g0121400"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os12g0121400| Description = Snf7 family protein| Version = NM_001072557.2 GI:297612564 GeneID:4351360| Length = 2839 bp| Definition = Oryza sat...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os12g0121400|
 
GeneName = Os12g0121400|

Revision as of 21:31, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os12g0121400

Description

Snf7 family protein

Version

NM_001072557.2 GI:297612564 GeneID:4351360

Length

2839 bp

Definition

Oryza sativa Japonica Group Os12g0121400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:1011332..1014170

Sequence Coding Region

1011442..1011609,1011792..1011906,1012188..1012279,1012384..1012469,1012989..1013088
,1014032..1014121

Expression

GEO Profiles:Os12g0121400

Genome Context

<gbrowseImage1> name=NC_008405:1011332..1014170 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:1011332..1014170 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgaagaaactgctatcaaagcccaagagcaagaagaagaaggaggctgcctcctctgccctccccactttggataggcttcatgagactctagaaatgctggagaagaaagagtgtttccttcagaaaaaggcttctgcagaagtcgaaagagctaaggactatacaaaagctaagaacaaaagcgctgcaattcaatgtctaaagaaaaagaagttgtatgaaacacagattgagcagctagcaaacttccaattacgggttcatgatcagataataatgcttgagagtgcaaaggcaaccacagatactgttgatgctttgcgctctggatcatctgctgtcaaagctattcaccagtcagtgagtatcgatgacattgaaaatgccattgaagaggcaaatgaacacacagagaatatgaggcagatacaggaggcccttgcaacaccaattggcgcttctgctgattttgacgaggatgagctagaagcagagctggaagatctagaggaggaagagctcgagaatgatctgcctgaaccacctcagaggacaagtatggaaccttcagcgagagttacgactactcaaccagccaatgatttggctgaactgaccaaacttcaagcagagatggcgctttga</cdnaseq>

Protein Sequence

<aaseq>MLKKLLSKPKSKKKKEAASSALPTLDRLHETLEMLEKKECFLQK KASAEVERAKDYTKAKNKSAAIQCLKKKKLYETQIEQLANFQLRVHDQIIMLESAKAT TDTVDALRSGSSAVKAIHQSVSIDDIENAIEEANEHTENMRQIQEALATPIGASADFD EDELEAELEDLEEEELENDLPEPPQRTSMEPSARVTTTQPANDLAELTKLQAEMAL</aaseq>

Gene Sequence

<dnaseqindica>2562..2729#2265..2379#1892..1983#1702..1787#1083..1182#50..139#acaggctatcgtcacccgagattgaagatcaagtgagtgttacaagaagatgctgaagaaactgctatcaaagcccaagagcaagaagaagaaggaggctgcctcctctgccctccccactttggataggcttcatgaggttgtttatcccttttccttttgcttattattgctagttttcattgctgctttctttacttaagtttcctcagaagaaatctatctgctataggggtatcgtgttaagcaactgtcaacaagataggaagcacaatttggagatatctctaattagtttttgttaataaaaaggtgtagactctagaattaggaattaaccacttggaagtaatgcagatcctcattactatgcatcacccaagtaaatatggaaacaatcttatgaagcaaccttgttcatcttatattgaatgcagaaatgtgaatgtttcgtgttcccaatgggcttctagaagaaagtatgaaataaaaatactgttaagttattttttgacatggacaaaactagatatctgtttatcttgaccatttcctaccattggtctagaagattttacttagttgaatttgaggtttggtcagccgaattgcctagtcaattttttgacagaaccttatgttttaaggacataataaaagaaagtatttgatcctgacacttctgatggcattgatataaagtatgttttggcacacaaaaaaatgaccggagtggtaatcatatatcgaaaaggaaaaataaacttcaaattaggtcgatgtattgtctgagctgcagcctctgcgacttatattactgtattctgtctcatacttaatgtcagaaagcaacatttctcataataaacgttctgtattgttgaagaaagttgtcatttctcataataaacttaactgaaataaagttgacatttctcttatatgttgacgaactgatactaggtaattaactggataaatttaagttgctctgagttatgaatattgccgaagatgtttattttgctatcttatttttaccatttgcagttgtttatttttaatacgatataaatgtgtagactctagaaatgctggagaagaaagagtgtttccttcagaaaaaggcttctgcagaagtcgaaagagctaaggactatacaaaagctaagaacaaaagcggtaggcatttcgtcgaagaaacttatttgtttgtcaagaaacatactgcgcatgtcttacaattttgtgataattttgctgtacctaaggttgtttttttttttttggattatgcattaacacttgaagaatttcacaacttttctcaaatatgtttggttgtgcaatatgtgaccattgtgttttggtcaaataccaatctcccatgttcatgtcttgcacataatccatacctcacgtataagatgggagaaaaattgtgggttagtatgcttgcatatgtggatataccattccctgaatatatggttatgaacttatggttccttaatgttgaaaaaaatgtttctcaagcttgtgatgactttgttaattaaggtttaaagagttgagggatgaataatgtccagttttgaagtttagggacgaattttaggctttgatagagttcagggacttaaaataataaaatgtacttttctcttagttaaatgacaaacaacttcctgtttgttgcagctgcaattcaatgtctaaagaaaaagaagttgtatgaaacacagattgagcagctagcaaacttccaattacgggttcatgatcaggtgatgaaagatatgtgcgcatattaatcttgaattttgaagcatttcgatattctcgaaggttgaaatgaattgacaggaagtagtctgttttggtatgctagataataatgcttgagagtgcaaaggcaaccacagatactgttgatgctttgcgctctggatcatctgctgtcaaagctattcaccagtcagtgtaagtctgtgtttgctctcttctttccaatcatggtttctgaaattgagtaatatgacgcgaaaaggtactagcctagcagtgtcttcttgagcttgtgtgcacaatgtgaacttaaatatggtttcaaacttacagcatgcatagttaaattcagcaacaatgtccatttatgaatacataatatatctttctagcttagatgtagccaatgtgttgaaacttaatttaaaataacatgtacttagataaactggtaagtaacgacgattgttccacaggagtatcgatgacattgaaaatgccattgaagaggcaaatgaacacacagagaatatgaggcagatacaggaggcccttgcaacaccaattggcgcttctgctgattttgacgaggtactgctcatatttccttttcccctttggtgtcagttaacaagtggtgcaagatcaagttatgtaattcaaaatagccattccacggagatgtaaatacatgtatgcatttaaacaggcacggtgtcaattttcataagatgcttgacttggtttttgtttatttatttattctgatgaaggatgagctagaagcagagctggaagatctagaggaggaagagctcgagaatgatctgcctgaaccacctcagaggacaagtatggaaccttcagcgagagttacgactactcaaccagccaatgatttggctgaactgaccaaacttcaagcagagatggcgctttgaccgcagtttggacggaattgtctgtattttgctgacatcctgtttgtgtagtgtactcgttttttaacatgttgtaaattcagtttgctgtagaaaaagcccttcctttt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0121400, RefSeq:Os12g0121400