Difference between revisions of "Os12g0125400"

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(Created page with "{{JaponicaGene| GeneName = Os12g0125400| Description = Similar to Homoserine dehydrogenase-like protein| Version = NM_001072576.1 GI:115487113 GeneID:4351381| Length = 380...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os12g0125400|
 
GeneName = Os12g0125400|

Revision as of 21:31, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os12g0125400

Description

Similar to Homoserine dehydrogenase-like protein

Version

NM_001072576.1 GI:115487113 GeneID:4351381

Length

3805 bp

Definition

Oryza sativa Japonica Group Os12g0125400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:1215712..1219516

Sequence Coding Region

1215892..1216026,1216393..1216462,1216623..1216786,1217418..1217471,1217856..1217896
,1218044..1218136,1218226..1218313,1218520..1218573,1218656..1218771
,1218964..1219041,1219171..1219321,1219399..1219509

Expression

GEO Profiles:Os12g0125400

Genome Context

<gbrowseImage1> name=NC_008405:1215712..1219516 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:1215712..1219516 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgccggtgaggtcggtgctccccgtcgtgctcctcggctgcggcggcgtcggccgccacctcctccgccacatcctctcctgccgccctctccacgccaaccagggcgtcgccatccgggtgctcggcgtcgccgacagctcctctctgctcgtcgccgacgacctccactccaacggcttcgacgacgcgctcctcgctgatctctgcgccgccaagtccgccggctcgcccttatcttctctgctctctcgagggcaatgtcagctattcaacaaccctgaggctaggaggaaagtcattgacactgccagcgttcttgggaaaacaactggtcttgtactagttgattgttctgcaacttatgatactgttggcatgctaaaggatgccgtggatcgtggatgttgtgttgtattggcaaacaagaaaccgcttacttgtgcttatgaggatttcgaaaagttggtttccaacttccgtcgcatgagatttgaatctactgttggagccggtttgcctgtaatagcttctgtgacccgtattattgcctctggagatccagtttctcgtattgttggcagtctgagtggtacacttggttatgtgatgagtgagctggaggatggaaagagatttagtgaagttgtgaaaactgccaagtctcttggctatacagaaccagatccacgtgatgatctcagtgggatggacgtagctagaaaggcattgatcttagctaggcttctggggcaacggatcagcatggagaatattaatgttgagagtttataccccagtgaatttggacctgatgcaatgtccacaaaggacttccttgaaagtggtttagtacagcttgataaaagcattgaagaaagagtaaaggcagcatctttgaaaggaaatgttcttcgctatgtctgtaagattgaaagcacagggtgccaagtgggccttgaagaactcccgaaaaactctgcactgggaaggttgagaggaagtgacaatgtggtggagatatacagcagatgctacgagagcgcccctctggtgattcagggcgctggagctggcaatgataccactgcagctggagttcttgctgacatacttgatctccaggatctcttccacaaaacggcttga</cdnaseq>

Protein Sequence

<aaseq>MAAPVRSVLPVVLLGCGGVGRHLLRHILSCRPLHANQGVAIRVL GVADSSSLLVADDLHSNGFDDALLADLCAAKSAGSPLSSLLSRGQCQLFNNPEARRKV IDTASVLGKTTGLVLVDCSATYDTVGMLKDAVDRGCCVVLANKKPLTCAYEDFEKLVS NFRRMRFESTVGAGLPVIASVTRIIASGDPVSRIVGSLSGTLGYVMSELEDGKRFSEV VKTAKSLGYTEPDPRDDLSGMDVARKALILARLLGQRISMENINVESLYPSEFGPDAM STKDFLESGLVQLDKSIEERVKAASLKGNVLRYVCKIESTGCQVGLEELPKNSALGRL RGSDNVVEIYSRCYESAPLVIQGAGAGNDTTAAGVLADILDLQDLFHKTA</aaseq>

Gene Sequence

<dnaseqindica>3491..3625#3055..3124#2731..2894#2046..2099#1621..1661#1381..1473#1204..1291#944..997#746..861#476..553#196..346#8..118#ccaacaaatggcggcgccggtgaggtcggtgctccccgtcgtgctcctcggctgcggcggcgtcggccgccacctcctccgccacatcctctcctgccgccctctccacgccaaccaggtacgtacctcgtctgaccgcccctccctctccccctcctctccgattggatgctctcatcgccgatacttgtatagggcgtcgccatccgggtgctcggcgtcgccgacagctcctctctgctcgtcgccgacgacctccactccaacggcttcgacgacgcgctcctcgctgatctctgcgccgccaagtccgccggctcgcccttatcttctctgctctctcgaggtatccccattctatttcgttattccttttttttcttttttagaattctccatagcttactttgtcatgaatttgcatttgtacacgtgacatgtaaagtaatggatggttggattgtgcaattttcagggcaatgtcagctattcaacaaccctgaggctaggaggaaagtcattgacactgccagcgttcttgggaaaacaactggtctgtgatccttctccctaagcagaatacattgccggttaagttttttaaaattttctatgggatagaaaccagtggggaaaaagatggaatctttgatatgctgtatgattgttgattagttctttgtttttttaaaaaaaaggagtattaatatcttcttcggttcttatcttacaatcctttttgcaggtcttgtactagttgattgttctgcaacttatgatactgttggcatgctaaaggatgccgtggatcgtggatgttgtgttgtattggcaaacaagaaaccgcttacttgtgcttatgtaatgtcctccttaagtcttccgtctggtatgtttttgtcattttgacatgcttaccaaatgtgttttttttttcatgcaggaggatttcgaaaagttggtttccaacttccgtcgcatgagatttgaatctactgtatgcatacgccactagtaattccttcgtttcactattgaatgttattatatttgtttttcatggaaattctttcctttatttgatctgggattgtatgatatgactctggccatatgattaagcacagcctttttttggaagtttcttttattattgcaaaggagttgagggtctctgctgatatttactattcctactcttaggttggagccggtttgcctgtaatagcttctgtgacccgtattattgcctctggagatccagtttctcgtattgttggcagtctgagtggtacacagttattatcttatttgtttgtaaaaggtgtttgttttccaaatagcagagcaatgtaccacttccattctatgattctgcaggtacacttggttatgtgatgagtgagctggaggatggaaagagatttagtgaagttgtgaaaactgccaagtctcttggctatacagaaccaggtctaaaaatttattcattcatttgacattataacatcaatgtgtactcagtattcattccttatctgtaattacagatttcatgtttacagaaagtctactgatgcttgtgataagtgcacttactcagttgtttaattttggtagatccacgtgatgatctcagtgggatggacgtagctagaaaggttaatttttcatctgatgaattacatgctactctacataattcactttatctgtgcctttgttaaccattgccacaattttattctactcctaagtccatgaactaatatatcatgagctgctgctgtgtatctattttttgtgcttaattgtatcatactatgatttgatccaaaatatattcagtaccacatcaatatcataaatactacagttcaggaaggcctatatcatgcactgaccctatttggaatttcaataataaccttgcaaatagacattggcataagggaggtttatgttcaggttcagatgttttatttgattatttcattctttgtcaattaggtgatgaggtctaacaagttcatctttgaatgcaggcattgatcttagctaggcttctggggcaacggatcagcatggagaatattaatgtatgcatataattaatcttgatggtatttgttctaatgttttgtgtaaacatagcttggtgtgcacgggcttatgttttcactaacataaatgaggctggtagcaagtgttttcctgttattctggctgttcaaaaaaacctagttggtttaaaatgatacatttcttgttgataccattcttggtgatagtttgcaagcattacttggaaccatccttttctctttagttctacttctataatatcttggcacatggattctatggataaggacagacactcttctacaatatcaggtcactggatatcaccatagatttgtgttcaggattattggggatcccgatgaattatacaccttatgtatcttatagtctgaaaatgaaatgaatgtcctccaaatcttggaagttgttatttagtttatgtagccattagctttgttgagtggccgctagttcagttgttttctatgatacaagaactttgattttgagatattttaacccctaaatcacttattcagaaattttctaatcatgcatagcctatttatgcacatgttctgttgtacatccctgttcatagaaaaaagatcaggtctgctaagtttttgtaattatcttcaggttgagagtttataccccagtgaatttggacctgatgcaatgtccacaaaggacttccttgaaagtggtttagtacagcttgataaaagcattgaagaaagagtaaaggcagcatctttgaaaggaaatgttcttcgctatgtctgtaagattgaaagcacagggtacgtatccttttattgtgctatgcccatctgaatcactaagtagtgttttgatactcaaagcatactattgtcagagacacgtaggcctattctgtgcattttgtaaaggtacttttaatggtagtgtagactgtagagtaacatccccattttgtaggtgccaagtgggccttgaagaactcccgaaaaactctgcactgggaaggttgagaggaagtgacaatgtggtatgctaatccttttttttcctttctctatttctattttattcaatgtcaagcggcactgtgcagttggtagccttaagggctggttattttcaggtgaaaacaaaagagcctacgagtgtgagcagggtctgtattggcataccattccccatttcttctttgcgttgttcaaacgagcttggaagttggaacactaaaactaccaaagacattgtttgtgttggcctataacacgttagaagtagattgatgaaatccatttttctgttttgagaggattaaagaatgtttgatatgtgattttttactgttggtagtgagtgatgtgaaacgtaaaagtgacgctgctttgttcttgggcaggtggagatatacagcagatgctacgagagcgcccctctggtgattcagggcgctggagctggcaatgataccactgcagctggagttcttgctgacatacttgatctccaggatctcttccacaaaacggcttgaaacctatgtcttctaggtcgaaccgcagagttgattatgagtcttgtgacttgtggggttgttttggtcacagtattacttaaataaatcttgagcagatatcaatttttgtactgtacgcagaaggtttttgaacaaatttggaagttggaaccaatgagcagtgtcatccttttgctt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0125400, RefSeq:Os12g0125400