Difference between revisions of "BGIOSGA025839"

From RiceWiki
Jump to: navigation, search
(Created page with "{{IndicaGene| GeneName = BGIOSGA025839| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025839, complete gene.| tag = P0678G0...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA025839|
 
GeneName = BGIOSGA025839|

Revision as of 16:59, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA025839

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025839, complete gene.

LocusTag

P0678G09.17

Ensembl Transcript ID

BGIOSGA025839-TA

Ensembl Protein ID

BGIOSGA025839-PA

Length

2334

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:18531013..18533346

Sequence Coding Region

18531013..18531235,18531323..18531445,18531526..18531614,18531763..18531868,18531958..18532055
,18532464..18532733,18533057..18533140,18533326..18533346

Genome Context

<gbrowseImage1> name=IndicaChromosome07:18531013..18533346 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:18531013..18533346 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATTCTCATGTTGGTAGCGGGAAAGTGATCACAGCACCATTAATCACTGAGGATGGTAGACCCATCAAAGACCCTTTGGTTTTACTCGAGGCTACTTCATCCGAAAACACATCAGACGGTACTTCAACAAGCAGCACAAATGGAAATGAAATAGATGAATCTGCAAGCCGTATTACAGATAAGCTCATTATTGACTGGAAGCTTACTTTGCATCAAATTGGACTTGATGTGCTACGTACGGACCGCACCATGGTATTTTATGAGAACAAAGAAAATCTTTCCAAGTTGTGGGATATTCTAGCTGTGTATGCTTGGATTGATAAAGATGTTGGTTACTGTCAAGGAATGAGCGATTTATGCTCGCCAATGATCGTGCTACTCAAGGATGAAGCAGATGCCTTTTGGTGCTTTGAGAAATTGATGCGTAGATTGAGAGGAAATTTCAAATGCACGGATCAATCTGTGGGTGTGGCTAATCAACTTCAGTACCTTGCATCTATTATTCAGGTGCTTGATCCAAAGCTACATGACCACCTAGAAATACTTGGTGGAGGTGATTATCTTTTTGCATTTCGTATGTTCATGGTGCTATTTCGACGCGAAGTGTCATTTGGGGACTCCCTGTATCTCTGGGAGATGATGTGGGCTCTGGAATATGATCCCGACATCTTCTTTGCCGCTTGTGAAGATGCAAGTGCTCACAAAAGTAAAGTATCTAAATCAAAATTGAGAGGGGTACGCCATTTTGGCAAGTGGGACAAAGACAAAGATAAAGAGAATTCGAAAAATGGATCTGAGGATACTGATGGTCCAGTTCCAATTTCAGTTTTCATGGTTGCAAGTGTTCTCAAGGAAAAAAGAGAAAAGCTATTACAGGAAGCTAGAGGACTGGATGATCTTATTAGGATTCTGAATGATGTAAATGGAAATTTAGATGCCAAAAAAGCTTGTGCTGGTGCTTTGAAGCTTCATAAGAAATACCTGAAAAAAGTACAGACAAAGAAACCCTAA</cdnaseq>

Protein Sequence

<aaseq>MDSHVGSGKVITAPLITEDGRPIKDPLVLLEATSSENTSDGTSTSSTNGNEIDESASRITDKLIIDWKLTLHQIGLDVLRTDRTMVFYENKENLSKLWDILAVYAWIDKDVGYCQGMSDLCSPMIVLLKDEADAFWCFEKLMRRLRGNFKCTDQSVGVANQLQYLASIIQVLDPKLHDHLEILGGGDYLFAFRMFMVLFRREVSFGDSLYLWEMMWALEYDPDIFFAACEDASAHKSKVSKSKLRGVRHFGKWDKDKDKENSKNGSEDTDGPVPISVFMVASVLKEKREKLLQEARGLDDLIRILNDVNGNLDAKKACAGALKLHKKYLKKVQTKKP</aaseq>

Gene Sequence

<dnaseqindica>1..223#311..433#514..602#751..856#946..1043#1452..1721#2045..2128#2314..2334#ATGGATTCTCATGTTGGTAGCGGGAAAGTGATCACAGCACCATTAATCACTGAGGATGGTAGACCCATCAAAGACCCTTTGGTTTTACTCGAGGCTACTTCATCCGAAAACACATCAGACGGTACTTCAACAAGCAGCACAAATGGAAATGAAATAGATGAATCTGCAAGCCGTATTACAGATAAGCTCATTATTGACTGGAAGCTTACTTTGCATCAAATTGGTATGCTTTAAACCCCCATTCTTTCTGCTACTTTTATACTTTATTTTACACTTCTACCCACTTATGAAAACTGTAAAATCATGATAGGACTTGATGTGCTACGTACGGACCGCACCATGGTATTTTATGAGAACAAAGAAAATCTTTCCAAGTTGTGGGATATTCTAGCTGTGTATGCTTGGATTGATAAAGATGTTGGTTACTGTCAAGGTGAGCTACTATATCTGAGTTGTGCACCTAGTGTCCAAAACAAAAAGGCTTATAGGTGTAACTTTTATACCTTAAAACAGGAATGAGCGATTTATGCTCGCCAATGATCGTGCTACTCAAGGATGAAGCAGATGCCTTTTGGTGCTTTGAGAAATTGATGCGTAGATTGGTAAGCTTTGTTCTCATGATTTTTCTCAGGACATCTTCCCCCTAATGTTAGAAATTATGATAGTGTATTTGTACTTATATAATTACATATAGTTGATTCCTTTTGTGTTTAACATAATTGTACTCACTCTGATGCTTTGAATTTGAAGAGAGGAAATTTCAAATGCACGGATCAATCTGTGGGTGTGGCTAATCAACTTCAGTACCTTGCATCTATTATTCAGGTGCTTGATCCAAAGCTACATGACCACCTAGGTATAAATTTGAGATCAATGAAACTTTCAAACATTCAACCTTCTTCTCCAAAGTACCTACAATTTTTTAATATTGAGTTCTGAATGCAGAAATACTTGGTGGAGGTGATTATCTTTTTGCATTTCGTATGTTCATGGTGCTATTTCGACGCGAAGTGTCATTTGGGGACTCCCTGTATCTCTGGGAGGTATGAAATAGCGAATGATGAATATTTCTAACACTAGAATAGTTTTGCTTTGGTATGAATTACTCTTCTGAATAGACTACATATTTACAAGTCATGCTACTTTAGTGATAAGTGATGTATAGTACCTTTTTCAAATAGGTGCTCCATTCATTTGTACATGTAGCCACAAAATTTGACCATCTTACTCAAATTGGGGTTGATGCTTGTGGATTAGGACATTAGGTTTATTTGTGTGTGCTTGCAGAAATACAAATTGTGATATGTTACAAGTTTTAAGGATGAACACTGTATTAATTCATAAGTTTGTTCCTTTGTGAAGACAAACACACAGTGCAGACTGCAATGTATACTTGAGTATCCAAGTGAGTTTTGTGTAGCTGCTCACGTTTGTTTATAACCTGTCAACAGATGATGTGGGCTCTGGAATATGATCCCGACATCTTCTTTGCCGCTTGTGAAGATGCAAGTGCTCACAAAAGTAAAGTATCTAAATCAAAATTGAGAGGGGTACGCCATTTTGGCAAGTGGGACAAAGACAAAGATAAAGAGAATTCGAAAAATGGATCTGAGGATACTGATGGTCCAGTTCCAATTTCAGTTTTCATGGTTGCAAGTGTTCTCAAGGAAAAAAGAGAAAAGCTATTACAGGAAGCTAGAGGACTGGATGATCTTATTAGGGTAAGTGCCACATCATTTTAAAAAATTTCCAATTCGTCTCTGTTGTTAAATATGGAATCTGGAGTCCTACATGATTTTGCGGCAAAAAACATGATTAATATAATTCATAAGAAAAGATTAGCACCCAGACTACATTAAAAGTTTGCAATCAATTTTATATTCCTCAATCTGCTATAGTTGAAACAAAGCTGATTTTGGTCTAACTCAAAAATTCAAATTGGTTTTGAGCCAATCTTGTCTCTTGTAAGATTGTATTTCATAAGCTCCTATGTTCAAGCATGTATTGTTCACAGATCTAACTCTTGACCTTTGTTTTGGTTCAGATTCTGAATGATGTAAATGGAAATTTAGATGCCAAAAAAGCTTGTGCTGGTGCTTTGAAGCTTCATAAGAAATACCTGAAAAAAGTAAGTAGCTATTCTTGTTGCGTTACTTAGGTGATAATGTAATTACTTTTTATGAAATATCATGAGCTAAACTTTCTCTAAAGCATGTCAATTTCAGAACTAAAAGACTAACATAGAAAACATATGTTGTGAACTGATTTTCTGGTGCTTATGAACTGAACACATAACATCTCTTGTTTCGTCAGGTACAGACAAAGAAACCCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025839