Difference between revisions of "Os12g0194800"

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(Created page with "{{JaponicaGene| GeneName = Os12g0194800| Description = contains InterPro domain(s): IPR001406| Version = NM_001072884.1 GI:115487729 GeneID:4351716| Length = 11613 bp| De...")
 
 
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{{JaponicaGene|
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Please input one-sentence summary here.
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GeneName = Os12g0194800|
 
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Description = contains InterPro domain(s): IPR001406|
 
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Version = NM_001072884.1 GI:115487729 GeneID:4351716|
 
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Length = 11613 bp|
 
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Definition = Oryza sativa Japonica Group Os12g0194800, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
  
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  ORGANISM  Oryza sativa Japonica Group
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==Annotated Information==
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
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===Function===
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
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Please input function information here.
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            clade; Ehrhartoideae; Oryzeae; Oryza.
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|
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===Expression===
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Chromosome = [[:category:Japonica Chromosome 12|Chromosome 12]]|
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Please input expression information here.
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AP = Chromosome 12:4862330..4873942|
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CDS = 4862372..4862674,4869140..4869196,4869669..4869746,4870218..4870268,4870509..4870594<br>,4870820..4870919,4870993..4871055,4871429..4871704,4872243..4872303<br>,4872410..4872510|
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===Evolution===
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GCID = <gbrowseImage1>
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Please input evolution information here.
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name=NC_008405:4862330..4873942
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source=RiceChromosome12
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You can also add sub-section(s) at will.
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preset=GeneLocation
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</gbrowseImage1>|
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==Labs working on this gene==
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GSID = <gbrowseImage2>
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Please input related labs here.
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name=NC_008405:4862330..4873942
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source=RiceChromosome12
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==References==
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preset=GeneLocation
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Please input cited references here.
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</gbrowseImage2>|
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CDNA = <cdnaseq>atgagcgccgccacccccgactccgccgccgccgccaagcgccccatcgacccctcccacgccgacccgtcgccggcggcgaagctccagaggtcgtccccgccggatccctcgccgccggctgaggcgcagggcgacgccactgacggcggcggcgaagtggctggggtgagaagcggggagatggccggcgcgcggaaccctcaggcgcagcggtacctggtcgccgtggagtacgtcggcacccggttctccggctcccagcagcagctcaaccagcgcaccgtcgtcggcgtcctcgaggaggcatttcacaaattcattggtcagccagtctcaatcttctgttctagtcgaacggacacaggtgttcatgctttatcaaatgtttgtcatgttgacgtggagcggataagtaaaagaaagcctggtgaaatgttgccacctcatgagcctggagttgtaaaacgtgcagtgaaccattttctacagaagaatgaaggtgacataatggtgactgatgtccgttgtgttgcaccagacttccatgctagatacaaagccctagagcgcacgtaccactatcgtttgctttctggatctgagccactatcagtttttgagaaaacctctgcttggcacatacccgaggatttaaatgtacaggcaatgaagaaagcgtgcagcatacttgttgggcatcatgatttcagttcatttcgagcaactggatgtcaggcaaactctcccatgagaactttggatgagcttagtgttacagaagtatttccttccatgttttttccttcaagcatggagcgatcagagatggagtcattagatgggcatcttgtttattcaagaacgtcagttgtggaatcttctggaaaaggatctgatgcttctagtacaagtgagcaatcaagatttgagaatggagaagaatttggaaagaggctaaggcatcgttgcttcgttgttactgcacgggcacgttcatttctttaccaccaggtaaggttaatggttggtcttctaaaatctgttggtactggagatctaacaactgaagatgttgagagaattctgaatttaaaggcagtgactgcggcacctcctatggcacctgcttgtggtctctaccttgccaacgtgaaatatgacctgagcgtttga</cdnaseq>|
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==Structured Information==
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AA = <aaseq>MSAATPDSAAAAKRPIDPSHADPSPAAKLQRSSPPDPSPPAEAQ                    GDATDGGGEVAGVRSGEMAGARNPQAQRYLVAVEYVGTRFSGSQQQLNQRTVVGVLEE                    AFHKFIGQPVSIFCSSRTDTGVHALSNVCHVDVERISKRKPGEMLPPHEPGVVKRAVN                    HFLQKNEGDIMVTDVRCVAPDFHARYKALERTYHYRLLSGSEPLSVFEKTSAWHIPED                    LNVQAMKKACSILVGHHDFSSFRATGCQANSPMRTLDELSVTEVFPSMFFPSSMERSE                    MESLDGHLVYSRTSVVESSGKGSDASSTSEQSRFENGEEFGKRLRHRCFVVTARARSF                    LYHQVRLMVGLLKSVGTGDLTTEDVERILNLKAVTAAPPMAPACGLYLANVKYDLSV</aaseq>|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 12]]
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DNA = <dnaseqindica>43..345#6811..6867#7340..7417#7889..7939#8180..8265#8491..8590#8664..8726#9100..9375#9914..9974#10081..10181#agagccctcgcagaaccctcactctctcatgccgcaatcaccatgagcgccgccacccccgactccgccgccgccgccaagcgccccatcgacccctcccacgccgacccgtcgccggcggcgaagctccagaggtcgtccccgccggatccctcgccgccggctgaggcgcagggcgacgccactgacggcggcggcgaagtggctggggtgagaagcggggagatggccggcgcgcggaaccctcaggcgcagcggtacctggtcgccgtggagtacgtcggcacccggttctccggctcccagcagcagctcaaccagcgcaccgtcgtcggcgtcctcgaggtgaaatgcttctaatctgagctgtggattcgaaatggcgaccgtaatctgcactgctacggatgtccctggtactaggtagctacacaaattttctgaaatcggtaggggcttggggcagatttacgaaggatgaaagtccatgagaatatgaagcatgtatactcgtcttttgctggtctaactgaatcgttacacttacgcggatggcctgctaaagttttagaaattttttttttgcatcaggagatttgacttatttgttgatgactagtacccaatccgtactgcaatttgaggttaatcattcccaaatagcaagtacattcagtagtaactgatatatatgcctgtccttgggtaagcccttggatctaacatatgtttggaatgcataggactaatttgtgaaagtaaaattggagccacgttatttttgacctctcgggttttgagctagctagtagcttcgcttctgttttgctctataatggatgaagttagactcagtgcaacagtaggaaattctatgacatttgtaaatctacacttgtcatgttatatgatcctatacataagaacaactgggtgatgcttggttttagtcttgtaatgggcccaagtgtagtagtcaggatgcaaatggacctcatgtgctctggtgatttgtcagctttgggttatcaagtgggtggtaaatggcaggggaaacgttgtgcagagtacgtcatgactgtggcgacacttttaactttggtgttctggagccgttcgttatgaaaccaaaatttcctaacaagcctcaaccataatattgatacaatcaaaacattggcaacattttgctttaaataaaagaaggcattgttattttcttccgtttctgaagtgtgatcaaagttaagccggtgaaagactatgtcttttatagcttagcaacttttagtggtttgtatgctgagggacactaaagcgagcaacaacagaaatatacccttgaagaatttccagggtgcaggagttacaggtagataacacttgctgctttttaagagcacttgcactgattgaccactttgtcacaactcacaaatgaatcaaatattttccttggaagtcaaatagataccttgaataaaagtatgagtttgtgctatccagggtctctagtgaactagaagatatactccctccgtttcacaatgtaagatcttttgactttttccaaagttaaacttctttaagtatgactaagtttatagagaaaaataacaacactttcaacataaaacaaatacaatatcaaaatattgtatttaatgaaactagttttgtgttgtaaatattgttacatttttctataaacttggtcaaaattaaagaagtttgactttgaagaaaaagtcaaaacatcttaacattgtgaaatggagggagtattaggattagtgttgttatcctgcatcttaaattgtttgcgtttagtctcctttgtgtgttatctatttgagatattggccttttggcttacagtggcaatgcatcagttacttttcctacatctttcacatggtattagagctgaattctaaaccgttgaatgatcgtccaacagcaacccacggctactaggagctgtagctcccacggtagtaccaaatctgttgctttttctgatctgtttcttgtcatgaaaatcactttgagatctgtagtggaggctacatggcattgttttccccaagtctgtggctatcaacagatttgtgacctggcgttgctgccataatcagcagtgtgtttgtgttggctctgcttggggtttagcatcttaggtgttagctctgataccttgtgagagatttagagacttggctgttgcgttacattgtagcccagtaggccaacatgtctatgtaaagggggaattgatatcttgacattccacaaaataaattggcttcgattgtttgcaatcctggcccacatgccattgactcagttccgcatgtcattgtcacagtctcacagcgtaacaagtaacaacataatcaaagtggcaaatcaccaatttttacacacaagggattaaagtagaccagcatgtcagtgttagcaaaaggaacataggtttggagctagttctttatttccatttgccacactcttaacatggctggttgggatacatatatcaactagtggcttacaccataaggcaaagcaaatagcttacatcctaaggtagctactagtgggcttacatcctaaggaaactactagtggcttacatcctaaggcagctaactattattccaaaatagatgttaaaacatatggtaaaaacaagacttaatctgtcattatccccctaagtcttgtgtggcaccttctggggaatttgaaccattccaatcctggcgcgaagctcttggaacttgacccgcccaagagacttggtgagaaggtcagcgagctgatcctgggtgttgatgtagctggccttgatgctcccctcgtccaagcagctccgaatgaaatggtacttgatgcggatgtgcttgctgcgctcatggaagacgggattcttcgccaaggccaaccttccagatgagcgacttgggccttctctccttctacctggggatctcccttcgtcagaccgcctacgccaagcgcatcgtcgagttgggtgggctcaccggctgcaacccagcctacactctcatggaggaaaggctgaagctgagccgtgacagcacggccaaggaggttgatgccacgcagtaccggcgcattgtgggcagccttcgctacctcgttcacacgcggccggacttggcgtttgctgttggctatgttagccggttcatgcagcgaccgatgacagagcaccagcgggctgccaagaggatccgccgttacgtcgagggcaccagtgactacggcgatgtaagccactagtagtttccttaggatgtaagccactagtagctaccttaggatgtaagctatttgctttgtcttatggtgtaagccactagtctatatatgtatcccaaccagccatgttagagtgtggcaaatggaaataaagaactagctccaaacctgtgttccttttgctaactgtcagggccaccagccataattttactttaataacatgccagtttcgcctacatcttgtgtttcagtcgtagactcgtagtagcagagcaatttacagaacaacatttagggagttgcctattggctgttgcagtgagacaaatggattatttctatgattccaggctttcttttaattcagatgatcggactgcaagatgaaataatctgcctttgtctaggtggttgtacacagatttaattaaggtctagtatttaagacaaaggaatggcccagtatttttctcctagaaatggaaatatacatttttagttttgtttgttaggatcatattgaaggcaagtggctactaaagaacggatgctgaattggctgcagttaaataatatgaactctagtgatttttcacaaagaaaatatgtgacatcaagattagttccatactcttgttttcgcttggtctcctttgtgtccaatgtattctagatatgccttttggcctacaatagcaatgcatcagttacgtttcctacatagttacatggtatcagagctgaaatcctaaaccaatgaatgtttatccagcaccaatcccctgctgctaggagctgtagctctcggggcagtacctaatccgctgctgatctgtttctagtcatgaaaagcactgtgatctgtaagtgcttgctgcatgccatggttttgcccaattctatggccatcgttggattcgtgacctgacagtgatgcaataatcagtgatggatttgtgttggctctacttggggttgaggatcttagctgttagctctgataccatgttaactgtttagagacttggctgatgcattacttttggaaaccatgtaaagagtacatgtgtacacataagagactaaagcaaaccaatgtgttactaaccctaatttattttgtagtagcatgcacgtctcatttgcatggggaattgcctataggctgttccagcagtacagatggattacttttgtgattcctgggtttcttttaaagttgagttgatagggcactggcaatattttgcacatgaccaaacagccccttgttattttctcccgttcctgaagggtgatcaaagttaagccggtgaaagactaatgtcttttttagaggttagcagcttttagtggtttatgaataccatgctgagagacactggagtgaacaataatagaaatatgtcctttaaatattgtgagggtgcagcatgaaattgctgcttcttaagagcacttgcactggtttgccacttttaccacaactcataaggaatcaaatgtttcccttggaaatcaaatagacaccttcaagtatgagtttgtgccatccaggagctctggcaagtggcaaacccgaagagccttatgttgtatcatgtgttaattatatatgaggatcagtcctgtacttccaagttattttcttttagtttcctttgtatctatgtgttcttgttggccttgtggcctacaatagcaatgcattggctatgtttcctatgtccaccatttggtattagagctgaaatcctaaacctttgattgtttgtccacaccaatccactgctgctaggagttttagctccaatggcagtacctaatctggtactgatctgtttcttttcatgaaaagaactttgtgatctgcatgccatggtattccccaagtctgtcgccttcaacggatttgtgacttgacattaatgccataatcagcagtatgtttgtgttggctctgattggggtttaggatgttagttgttagctctgataccaattgttggacctagagacttggctgacgcattactattggagcccaacatgtctatgtaaagggtacatgctacaacatcagaaactaaagaaaaccaatgtgtcagtgtcgctaatcctaatttaccttttatcacatgcacattccacctacatggatgcgtttgagttctagctagcagagcaatttacagaacaacatctgcggtagttgcctatatgctgttcactagatggacagatggattagttttgtcattccaggctttcttttagttgagaagatagaattgcaagatgaaataaactaccttttgtttttttcttgagataaacataaactacctttgttgctgtacacactacacaaaggtttaatgttgttctagtatttaagatggcttagtattttgtcctaacaatgaaaatatacatgttcagtttctttttgttaggatcatattgaagtcaagtgactactgaagaatggatgctgacttggctgctgttgaataatatgaaatctagttttcttataaaaatatgcgatatcaggattagttccatattcccatgttgtttacccttagtctcctatgtgtcctatgtattctagatattggccttttgtcctacaatagcaatgcatcagttatgtttcctggatcattaaatcattgaatgtttatctagcaccaatctgctgctgatctgtttgtagtcatgaaaagcactttatgatctgaaagtgctggctgtatgccatggttttccccattctatggttattattgcaatcgtgacttaatagtgatgcaataatcagtagtggattcgtgttggctctacttcgggtttaggatcatagttattagctctgataccatgttattgatttagaaacttggctgatgcattacttttggagaccaacatgtcgatgtaaagggtacatgtgtacacataagaggctaaagcagaccaatgtgtcactaaccctaatctattttgaataacatgcatgttttatctgcatggatgtgtttcagtcctgggtagcagagcattttacagaacagcacatggggattggctaatacaaaattacaaatggattactttgtcatttcagtctttctttgtataggactctaggatatttacggaaggatttaattacagttattaagatcaagtgacccagtattttttgtcctagctgcaacaacatacatgttttgttttgtttgttagtatcagattgaaggcaagtggctgctgaaaaatggatgttgacttgttgactgcagttgaataatacgaagtccagtgctttgttaaaagataatattatcataaacattgtcatttgcaaaatgctcctcttattgttggaatgactagtcaaataccacttgatagattacttctacagcctcaacttattactagttgtgaaatgttaattgatgctaaatgtagttcacacgtcacacccatgcttttgaattatttcaggaggcatttcacaaattcattggtcagccagtctcaatcttctgttctagtcgaacggtatgtgaacttgttttattgcaatttcttctttttccttctaggtcagtatttgccttcagtacagcatgttttcttttactatttgaatatccattatcttgtgatagaaattacttgtggtctcttgctgactgtcactagtgagttttttactacgtaaacatggatacctggtatagttgtaccaacaatcgattatgtaatatgtatgtcagactggaggaattttggatcaatattgcatagcataatagatgtaaatagtggttaagatagaatagaattaccaggatcaatccaggttatggtcatagaagtatgatcaaattagtggagaggttatgccttctattaaatcaatgaatttatttctcacatctttgcaacatgctatgatactcttagtttcctgcaatgttatggcatactcatatgtattgattagtgaatgacttatattctggttcaggacacaggtgttcatgctttatcaaatgtttgtcatgttgacgtggagcggataagtaaaagaaagcctggtgaaatggtatgtgtccacaaactttctttccttactgggtttactcccaatactttttttctgcattttttggtactcaaaaacttattttgagtcttcaaatgcaactttgacccccccccccccagtcttctattggaatatatttttaaaacccattagaattataatattatgaaagtatttttttgagacaactctacattatgatttgtgtatattctaaatctatattgattctcaaatgttaggtggcccttggatgcttatctaaaacaagcacatatgtgactggactacatgataatttaggttgactgctgtaacatccatgttagaatctcactatatgcccccaaaccgatttcataaatgaactgtttttccctcttgacttgtacctctttatttgtgtaaacaaaaatatgttatgtagaacatctgtagccctgatgaccttcttgtccccatttgcagttgccacctcatgagcctggagttgtaaaacgtgcagtgaaccattttctacaggcaagtttttgacccaatcttgttatagtttcattcacctacaaattgtcagtccactttctctatagaagttatcatactgtaccttcgttctttgttttggtgatggcacacattcatatggttgatttgcttctcagtaatttgtctatgtactttacatctttacccgtttattgatggtgttatttccttatctgccattgtatatttatttttgcttcaccattttcctcgcagaagaatgaaggtgacataatggtgactgatgtccgttgtgttgcaccagacttccatgctagatacaaagccctagagcgcacgtaggtagcaaaatatacaatacaataaagggattttctcatttgctcttgttgttatacttgttccattcttatgtccaaattattttatcacaagcagcaataacccaaaatattaacatgctgtagtttttttgaagtaaatgagagaaaaatgaagcctgcttaaagaccagcctttctgaaatattggaaatgcttatatttttacttatgttcttgaaggtaccactatcgtttgctttctggatctgagccactatcagtttttgagaaaacctctgcttggcacatacccgaggatttaaatgtacaggcaatgaaggtgaagttttcttccatcattatttcctgatacaaaaattatattactgggtttactgatgattcatgttcagaaagcgtgcagcatacttgttgggcatcatgatttcagttcatttcgagcaactggatgtcaggtggtgtacttacttcttaactgctactcatttaaacagagctttttgaagaaatgcaagtatagtaagtcaggagataatcatagagttggagcattacatttggacagttgaacacagatttccctaccataagtgcatttaatttttcccctgcaatttgatcgagaacaaagtggactctgcagaatgcaaactatgaatcaagttaatttaattatttgctgaactatataacccatatttagaattttataattgatactttaacggaaacaataaacatttttcctgttttctagcgttttttggattttagcgtccaccttgtttacatgaaatttgattttctcttggcaattattgtttacaggcaaactctcccatgagaactttggatgagcttagtgttacagaagtatttccttccatgttttttccttcaagcatggagcgatcagagatggagtcattagatgggcatcttgtttattcaagaacgtcagttgtggaatcttctggaaaaggatctgatgcttctagtacaagtgagcaatcaagatttgagaatggagaagaatttggaaagaggctaaggcatcgttgcttcgttgttactgcacgggcacgttcatttctttaccaccaggttaattcatcttccatgaaggctaacttcagagcctagggatttacctggttgattgctgacttgctaaatcattttttgactgcctgtgtgggtgcccttgattgattgcaagttactctaatgatgttcggttcttaattcccatagtgttaattaagaacatatttcgtggtaatttgggaagtacttgtgttttggagcggagttcaacgcaatgttcctgggaaataaaaaaaaagtgtctatttctctcttttatcttcaaagttcaaactgttcatgttgtggagccttaaacctctgaaaaatgttttgatattagctgtaacgttaggcatcatccactttaactctattttcttgttggttgtagataaatgtgtttgagcaatgagcatgtaagcatttgctattactaggcaactttatgtcaccattgttggcttgttgccattaattgattattggatgatgctacccttcctcttctttttggtcatttggtatgttttttatgtcttctctgatggtgcaggtaaggttaatggttggtcttctaaaatctgttggtactggagatctaacaactgaagatggtctgttttgattcctttaataaaattttcactgagtatcttttgtgttttgccttttgctccatagattgtgaaatgatgtgaacgtttatggtctttgatgcagttgagagaattctgaatttaaaggcagtgactgcggcacctcctatggcacctgcttgtggtctctaccttgccaacgtgaaatatgacctgagcgtttgaaggcagatttctgaaatgaccacaagttatgtcatgttttgtctttcagaggtatgtctaatgtactagtagctttttatgactcgtactgttgtatgtctgtataatctctactcactgcattttgattcagaattatttgccatgacacagcaagctatgatctctattgagtctattcaaacactgcccagttttatcagtaattatgcgctgttgcacaccacatcaagattttggcattgcatgatccttgtgttgatctttctatgtattgcagtattggtaatttgagcttctctgaggtacatctgttcagttagttcaggtcttcagtctaacagtggatatcctggcagtacttttctctttggtgaaccactaattagaaatggttaaataaaatacacggtctgacaagctaactgttgacccagtgcttccacctgggtcaatggtcgatccagggtgtgataagtgataacactacctacaagctacagtagtgttcctatgtgctgcaatgggaattagtttctttgtattggagtgtattgaataattttttaactaacatgacttttgaatttggccaaatcagtgatccatagtgaggataaagggtgcacgtgttggtctggaattttatgtgatgggctgtggtaggagaggtttggtgtgggaccaaattagaactaaccgtcgactgccagccaaataaatatgaatcttttggtgatctatagttgatagtggtacttgggaaattggatttatccctccttggttctttcttgtcacctactggctctgtaatctaattaactgtcatcaactacttgtaaaaggtgttgtattgattgtgtttcctttaaatttgtcaatttttctaagtagttctcttctttagctaattacattgagtttgagacctttacttaagttagaaatcaggatgtttttccagttatgaacttatgttaaacagcatgtgagaagtaataccttttcttcctttccaggcccatgtgtttgaattattgaaatactgagtagagaggtccagacgcaccttggaaaggaaaatgctttctcatggtccgaattttgtgcaaatctggaaaattttccccgatatttataagatacttttgtgcacatgatggaaggacatgtatttccatgttctcattagtttcgactcctatgtattcagattatcagatgtcaagtcgcataacattctctattgaatgtatgcacaaagttctagatcctaggacaaattaaactgtatatgtaaactagagtggcagctgacccttccttgattatgccttatattgtttcatcttcatttcacacagcacatacattatgcaaactgcattgcatggaatacatttcaccttcaattcatacatttgatctg</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001072884.1 RefSeq:Os12g0194800]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 12]]
 
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[[Category:Chromosome 12]]
 

Latest revision as of 03:38, 15 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

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You can also add sub-section(s) at will.

Labs working on this gene

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References

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Structured Information