Difference between revisions of "BGIOSGA037466"

From RiceWiki
Jump to: navigation, search
(Created page with "{{IndicaGene| GeneName = BGIOSGA037466| Description = Pollen-specific protein SF3, putative, expressed| Definition = Oryza sativa Indica Group BGIOSGA037466, complete gene....")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA037466|
 
GeneName = BGIOSGA037466|

Revision as of 18:35, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA037466

Description

Pollen-specific protein SF3, putative, expressed

Definition

Oryza sativa Indica Group BGIOSGA037466, complete gene.

LocusTag

LOC_Os12g32620

Ensembl Transcript ID

BGIOSGA037466-TA

Ensembl Protein ID

BGIOSGA037466-PA

Length

1555

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:15912332..15913886

Sequence Coding Region

15912332..15912472,15912670..15912766,15912870..15912913,15913404..15913487,15913725..15913886

Genome Context

<gbrowseImage1> name=IndicaChromosome12:15912332..15913886 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:15912332..15913886 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACTTCCTTTCAGGGGACGACGACCAAGTGCATGGCGTGCGACAAGACGGTGTACCTGGTCGACAAGCTCACCGCCGACAACAGGGTCTACCACAAGGCCTGCTTCCGGTGCCACCATTGCAAGGGCACCCTCAAGCTCGCGAACTACAACTCGTTTGAAGGAGTGCTCTACTGCAGGCCTCACTTTGATCAGCTGTTCAAGAGGACTGGAAGTTTAGACAAGAGCTTTGAAGGAACTCCAAAGGTTGTCAAGCCAGAAAAAACAGTTGAGAATGAGAATGCTATTAAAGTCTCGAGCGCATTTGCTGGCACGAGAGAGAAATGCGTGGGATGCAACAAGACAGTCTATCCAATTGAAAGGGTTACTGTCAATAACACCATGTATCACAAAAGCTGCTTCAAGTGCTGTCATGGAGGATGCACCATTAGCCCCTCAAATTACATCGCACACGAAGGGAAGCTCTATTGCAAGCACCACCATATTCAGTTGATCAAAGAGAAGGGGAACTTCAGNCCAACTTGA</cdnaseq>

Protein Sequence

<aaseq>MATSFQGTTTKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKVVKPEKTVENENAIKVSSAFAGTREKCVGCNKTVYPIERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFXPT</aaseq>

Gene Sequence

<dnaseqindica>1..141#339..435#539..582#1073..1156#1394..1555#ATGGCGACTTCCTTTCAGGGGACGACGACCAAGTGCATGGCGTGCGACAAGACGGTGTACCTGGTCGACAAGCTCACCGCCGACAACAGGGTCTACCACAAGGCCTGCTTCCGGTGCCACCATTGCAAGGGCACCCTCAAGGTATGCATCAGTGGTTGGGGACCTGGGGATCAGGGGGGTTTCTTGATACTGCCCAGCCTGCACATTTTATGCTCAGTGAAAGAGTTGTTTTCTGTGAGCTTTCTCTTGAGTTTTTTCTTTTATGAGGAATGGTAAAAGAAGTGAAGTGGCATAAGAAACTTACCAGAATATGCATCGTGATGATGCTTCCGCTGCAGCTCGCGAACTACAACTCGTTTGAAGGAGTGCTCTACTGCAGGCCTCACTTTGATCAGCTGTTCAAGAGGACTGGAAGTTTAGACAAGAGCTTTGAAGGTACTGAAGTCACTCACCTCCCTGGTTCATTCCTGTGAAATTACAGAATGATTCTGTGGTTCTTGAGCCTGACTAGTATTTATCCTCACCTGCAATGGTTCAGGAACTCCAAAGGTTGTCAAGCCAGAAAAAACAGTTGAGAATGAGGTATGGAATCTCTAAAAATATATCCAGAGTAGACTTGTTCATATTTCCTGGAATACTAGTGAGTTCGTTTTTTTCAAATCAGACCACAAAGTTACATATAAGCACTTGTACACACTGATCAAATAGATAACAAATCCCCCTCTCAAAACTGCAAAGATCTAATCAGGAATGAAGCTTAGTTCATAGACACAATCTGAAGTATAGACAGCTCAATATATATCAAATACTAATGAGTAAACACTAATCCATTCAAAACGTTAAGTATAAGAAATGGATCTGACCAGGTAGGAACTATTTCAATAAAAGGTGACAACTATGCACCAAAAAAAAATGCGACTTGAAAACATTGAGAAGTAGAATATTGACAAAAGTTGGTGCCCTTACACTCAGTACTGTATGGTTTCATATAATGTATTTGGCATCGTTCATCTCCTTCTTTGTCATCAACTACCACATTGGGTGTTGCTTATCATGATTGTATTTTTGGCAGAATGCTATTAAAGTCTCGAGCGCATTTGCTGGCACGAGAGAGAAATGCGTGGGATGCAACAAGACAGTCTATCCAATTGAAAGGGTACTATTTTGTACTCTAATCAACTCTCTCATTTATTTTTTGGGAGTTTCCTTTACTTGACCAGCTGTAGACTGTATCTGGCTTCATGTTCATGAAGACAACATTTGCTGAATATGCAAGTTGGACCCTCAATTATTGATCTTTTTTTCTTTACTTGAAGATAAGAAAAGGAGCTGCAGCCTCTTGATTTTGAATGGGTAAACAGTACTGATCCCAATATTCTTACCAACTCTGCAGGTTACTGTCAATAACACCATGTATCACAAAAGCTGCTTCAAGTGCTGTCATGGAGGATGCACCATTAGCCCCTCAAATTACATCGCACACGAAGGGAAGCTCTATTGCAAGCACCACCATATTCAGTTGATCAAAGAGAAGGGGAACTTCAGNCCAACTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037466