Difference between revisions of "BGIOSGA037595"

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(Created page with "{{IndicaGene| GeneName = BGIOSGA037595| Description = Os12g0562600 protein| Definition = Oryza sativa Indica Group BGIOSGA037595, complete gene.| tag = OS12G0562600| tid ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA037595|
 
GeneName = BGIOSGA037595|

Revision as of 18:40, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA037595

Description

Os12g0562600 protein

Definition

Oryza sativa Indica Group BGIOSGA037595, complete gene.

LocusTag

OS12G0562600

Ensembl Transcript ID

BGIOSGA037595-TA

Ensembl Protein ID

BGIOSGA037595-PA

Length

6347

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:18548763..18555109

Sequence Coding Region

18548763..18549070,18549826..18550267,18550381..18551005,18551935..18551975,18552066..18552134
,18552497..18552597,18553140..18553218,18553663..18553761,18553840..18553908
,18554000..18554049,18554133..18554214,18554714..18554808,18554980..18555109

Genome Context

<gbrowseImage1> name=IndicaChromosome12:18548763..18555109 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:18548763..18555109 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCGCTGGCTGCCGCCGCCGCCTGCACCAGCCGCCGCTGCCGGCGAGTCGGCTCTCCGGGGGGTTCGAGGGCGGGGCGCGCGCCTGGGCGCGCGGCTCCGCGTCGTTCCCGCACTCGTCGCCGCTGCAGCGCGAGGGCCGCGCCGCCGCGGCCGCGGGCGGCGGGTTGACGGAGAAGCAGTACACCAGGGTGTTGCAGTCGCTGGGGCAGTCCGTACACATTCTTGACCTCGAAGGGAAGATCATGTACTGGAATCGATCTGCAGAGAAACTGTATGGTTATCCAGCATCAGAAGCACTTGGTCAGGATGGCCTCATGCTGCTGATTGATTCCTGTGATATCAATGTGGTAAATGACATCTTCCGACGCATATCTCTGGGTGAGAGTTGGACCGGAAAGTTTCCAGTTAAGAACAGAGCTGGAGATAGATTTTCAGCTGTTGCCACCAACACTCCTTTTTATGATGAGGATGGCAGTTTGGTGGGCATTGTTTGCGTTTCAAGTGATTTGCGCACAATGGAGGAGATAATCAGTGGCCCTTCAATCTGTGCAAGGCCCCATCCAGAATCTTCTAGGACCTACTGTGAAGCTAGTTGCAGCAACAGCAATCGCAAAGCCAGTTTGTTGAGCAGAAGCCCATTTGACTCTCAGCAACCTTTGCAGTCTACTATAGCCTCCAAGATAACAAATTTGGCTACGAAGGTCACAAATAAAGTTCGTTCTAGAGTCAGGGCAGATGAAAATGGCATTGAGCGGGAAGGTGGTAGCGGTGAGAGTCATTGTTCTGATCGTGATGCCAAGGAGGAGCCAACGTCTAGTGGAACAACTACGCCAAGAGGGGACGCACCACGCGGAGCCTTTGCTACAGAAGAGAGTTCCCCTGGGAAAACTGCCAAAATGAACAGTGATGAATCAGAAGGAAAAGTAGGGTTCCACAGGATCTTGAGTTCAAAGGCAGAGGCACTGCTGAACAAGAAAGGGATATCATGGCCTTGGAAGGGGCGGGATAACGATGGACCTGATGTGAAGAACCAAGCGACCTGGCCGTGGTTGCATGGGGAGCAAGATGGCAGCCAGAATCATCAGAAAATTTCTGATTCTGCCATAACTCAAGATGGTCAAGGTGCTGAATATAACCAACCTAACAAAAATGAGGCATCAGGTTCCTGGTCCTCTTTCAACAATAACAGCACAAGCAGTGCAAGCAGCACGGGTAGTACTAATAGTAGTGCTCTTTACAAAGTAGATCATGAAGCAGATTGTTTGGATTATGAAATCCTGTGGGAAGACCTTGTCATTGGAGAACAAATTGGTCAAGGCTCGTGTGGAACAGTATATCATGCTTTGTGGTATGGCTCGGATGTGGCTGTTAAAGTTTTCTCTAAGCAAGAATATTCAGAAGAAGTGATACAGACCTTCCGACAAGAGGTATCCCTTATGAAGAAACTACGCCATCCTAATATACTTCTCTTCATGGGTGCGGTTACATCTCCACAACGCCTCTGTATCGTAACAGAGTTCCTCCCACGTGGAAGTTTGTTTCGCTTACTTCAAAGGAACAATACCAAGTTGGATTGGAGACGACGTGTTCACATGGCTTTAGATATTGCAAGGGGGATGAACTATCTTCACCATTCCAGCCCACCTATTATTCATCGGGATTTAAAATCATCCAATCTTTTGGTTGATAAGAACTGGACTGTCAAGGTTGCAGATTTTGGTCTTTCACGTCTCAAGCGTGAAACATTCCTGACAACAAAAACTGGAAAAGGAACACCACAATGGATGGCTCCAGAGGTGTTGCGCAATGAGCCTTCTGACGAGAAGTCTGATGTTTATAGTTATGGGGTCATCCTGTGGGAGCTTGTTACTCAGAAGATACCCTGGGAAAATCTTAATTCGATGCAGGTCATTGGTGCAGTTGGTTTCATGAACCACAGGTTGGAGATTCCTAGTGAAACAGATCCTCAGTGGACATCACTTATCCTGAGTTGTTGGGAAACTGACTCACAACTCCGTCCATCGTTCCAACAACTTCTGGAGAGACTTCGAGAGCTGCAAAGGCAGTACAATGTCCAGACTCAGATGCAGCGAAATGCATCCGCTGCTGCAAAAAATAGCAGCATTGAGTAA</cdnaseq>

Protein Sequence

<aaseq>MPXXXXXXXXXXXXXXXXXGAGCRRRLHQPPLPASRLSGGFEGGARAWARGSASFPHSSPLQREGRAAAAAGGGLTEKQYTRVLQSLGQSVHILDLEGKIMYWNRSAEKLYGYPASEALGQDGLMLLIDSCDINVVNDIFRRISLGESWTGKFPVKNRAGDRFSAVATNTPFYDEDGSLVGIVCVSSDLRTMEEIISGPSICARPHPESSRTYCEASCSNSNRKASLLSRSPFDSQQPLQSTIASKITNLATKVTNKVRSRVRADENGIEREGGSGESHCSDRDAKEEPTSSGTTTPRGDAPRGAFATEESSPGKTAKMNSDESEGKVGFHRILSSKAEALLNKKGISWPWKGRDNDGPDVKNQATWPWLHGEQDGSQNHQKISDSAITQDGQGAEYNQPNKNEASGSWSSFNNNSTSSASSTGSTNSSALYKVDHEADCLDYEILWEDLVIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSEEVIQTFRQEVSLMKKLRHPNILLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNNTKLDWRRRVHMALDIARGMNYLHHSSPPIIHRDLKSSNLLVDKNWTVKVADFGLSRLKRETFLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSYGVILWELVTQKIPWENLNSMQVIGAVGFMNHRLEIPSETDPQWTSLILSCWETDSQLRPSFQQLLERLRELQRQYNVQTQMQRNASAAAKNSSIE</aaseq>

Gene Sequence

<dnaseqindica>1..308#1064..1505#1619..2243#3173..3213#3304..3372#3735..3835#4378..4456#4901..4999#5078..5146#5238..5287#5371..5452#5952..6046#6218..6347#ATGCCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCGCTGGCTGCCGCCGCCGCCTGCACCAGCCGCCGCTGCCGGCGAGTCGGCTCTCCGGGGGGTTCGAGGGCGGGGCGCGCGCCTGGGCGCGCGGCTCCGCGTCGTTCCCGCACTCGTCGCCGCTGCAGCGCGAGGGCCGCGCCGCCGCGGCCGCGGGCGGCGGGTTGACGGAGAAGCAGTACACCAGGGTGTTGCAGTCGCTGGGGCAGTCCGTACACATTCTTGACCTCGAAGGGAAGATCATGTACTGGTGAGATTTTCTTCTTGTTGTTCTTTTTTTTTCATAGCATATGCTAAATGTTTGAGGAAATGCCGTGTTTGATGATGTAGGATGATCTAGTGTTGTCGTGTGCTTTAGATGAAGTGACCCGTATATCGGAATGTATCAGCTTGAGATTTAGGCTATTTTATCTCTTTCCAACTTTGAAACAGTACTAACCCCTAGAAGAGACTCTTGATGCATTTTGGTTGTGGTCTCATTTTCACCATGGATGGATTTAACAAGTTTGAGCAGCAGTGCACGCACGTACTTGAAGTAACGAAACCTTACGCGTGTAAGGCTATAGGTTTTTTTTGACTGTGTTGAATCAAATAAATTTTGTAGTGGATGTCTAGATTTTAGTTGCTTTTAGTAATGAGTTTTTGCATTCTTTGAAAGGGAACTTTTACCAGATTGAAGAAGACATTAACTTCGGTAGTACATAGCAAAGCGATAAGGCATGTCGTAAGTTAGTGGATCAAGATCAGTAGTCAAGATTTGAGCTTAACTTGGTAAGCTAACACTGCTTATATGTAGATGTAATTGATATAATATTGTCTGACGCATATTGCTTGTGGATAGAACCATTTAGGAGTACGTTAGAAAAGAAACATAGTTCGATAAGCACATACCTGCTCCTCAACTTTGCGATATAGCATAAGCTTTGGTATTTTCTTGCAGTCTGCAATTGTGCACAGATCTTCTCTTCTCCTTCCTCATTAAACCTTGCATTTACTATGACGCAGGAATCGATCTGCAGAGAAACTGTATGGTTATCCAGCATCAGAAGCACTTGGTCAGGATGGCCTCATGCTGCTGATTGATTCCTGTGATATCAATGTGGTAAATGACATCTTCCGACGCATATCTCTGGGTGAGAGTTGGACCGGAAAGTTTCCAGTTAAGAACAGAGCTGGAGATAGATTTTCAGCTGTTGCCACCAACACTCCTTTTTATGATGAGGATGGCAGTTTGGTGGGCATTGTTTGCGTTTCAAGTGATTTGCGCACAATGGAGGAGATAATCAGTGGCCCTTCAATCTGTGCAAGGCCCCATCCAGAATCTTCTAGGACCTACTGTGAAGCTAGTTGCAGCAACAGCAATCGCAAAGCCAGTTTGTTGAGCAGAAGCCCATTTGACTCTCAGCAACCTTTGCAGTCTACTATAGCCTCCAAGATAACAAATTTGGTGAGTTCTTATTTCTAGCAAACAGCAGATATAAATACGAACTGCAATAAAATATTGTCTATGTTTATTTGTTCCTAGCATATTCCTTTTTGATTTTTAGAATAACAACACAGGCTACGAAGGTCACAAATAAAGTTCGTTCTAGAGTCAGGGCAGATGAAAATGGCATTGAGCGGGAAGGTGGTAGCGGTGAGAGTCATTGTTCTGATCGTGATGCCAAGGAGGAGCCAACGTCTAGTGGAACAACTACGCCAAGAGGGGACGCACCACGCGGAGCCTTTGCTACAGAAGAGAGTTCCCCTGGGAAAACTGCCAAAATGAACAGTGATGAATCAGAAGGAAAAGTAGGGTTCCACAGGATCTTGAGTTCAAAGGCAGAGGCACTGCTGAACAAGAAAGGGATATCATGGCCTTGGAAGGGGCGGGATAACGATGGACCTGATGTGAAGAACCAAGCGACCTGGCCGTGGTTGCATGGGGAGCAAGATGGCAGCCAGAATCATCAGAAAATTTCTGATTCTGCCATAACTCAAGATGGTCAAGGTGCTGAATATAACCAACCTAACAAAAATGAGGCATCAGGTTCCTGGTCCTCTTTCAACAATAACAGCACAAGCAGTGCAAGCAGCACGGGTAGTACTAATAGTAGTGCTCTTTACAAAGTAGATCATGAAGCAGATTGTTTGGATTATGAAATCCTGTGGGAAGACCTTGTCATTGGAGAACAAATTGGTCAAGGTAGTCCATTCTCCTTTTTTGAATGCTTCCTTAAAACCTTTGTGCATACAAGTATTGTATGGGAGTTTTTAAATTTTTTATGCACAGTTTCATTATTTCCATAGTATTTGTCCAAACTTGCCTTTTCTGCATAGAGTTAGTTTAGGATACCTACTATGCTCCCCTCTTCATTTTCTAAATCTATATCTGTTGCATAACCTCTTTTTATCAAGACAACTCTATAATTTATTGCTCGACCTTCTGATATTCTAAATAACGTTATTAGCATTTCTTGGCCTTCGAGATGTGATGTTCACCGTTACTATTTATAGTTCTAACTCATTAGAAATTAGTAAAACCTACAATATTATGGAAATATTATTAGCTACAGTTATGCTCACCATATATGCATATACCCTTACCGTGTAATATCAAATTTATCTACTGTTTTGCTGAATTCTGTTTCTAAGTCCTTAGCTCTAAACCTGAGTAGAACCAAACCATATAGTTGCTTTAACTCCTAATGAGAGCCTAGAGCTTTGGGCTCTTTGGATAGTATCAGTTTTAGTATGTTTTAAAATTTGCAGTCATTTTCTAGCTGACCAATCCCTAGGACTTCAAACATTAGGTAAACTTGCATCCACCAGGTAGGTTGCTCTTGAACTTTTCCAAACATTTGTGTTTGGACGCTTGTAAAGCTTCAAATAAGCTTTGTAGGTTAAGCTACTCTTCCAGGATCTCTCCATGTCTAGCCTAGAAACTCTGGAGCTGAAGCTTTTCTAGTGAAGCTATCGTCTATTCAGTTGCTAAGGCTTAGATGAAATTCAAAAATCTCAAAGGAGTGCAAGCATGACTAAAATCATATGAACGATTAAAATACACACCTGTTTGTAGTGTATTATGCTGAATGCCCTTTTAAATTGTGTCCCTCTCAATTTTGATCTCTGCAGGCTCGTGTGGAACAGTATATCATGCTTTGTGGTATGGCTCGGTATGTTCGATTGTTCCAATGTTTCATGAATAAGTGTTATATGTTTACTTTTGCTATTAATTTCTTCATTTTCTGTGGCATGTTTTGCAGGATGTGGCTGTTAAAGTTTTCTCTAAGCAAGAATATTCAGAAGAAGTGATACAGACCTTCCGACAAGAGGTAGATTTCCATCTCCAGCTACAACATCTGAAAATAAACCTTGTCTCTCTTTCCAGTTGACTTTCTTTCTGTTGTTAAACCTGATTAGCAGTATAATTGTGATGCTTTCTTTTTAGTTTGAGAGGCTTAAAAGAAACTTGAAATGTAAAGCCAATTCAGGTTTTCAGGATGCCCATAAAACCTATCATTGCCATGGTTGCCAAGTATATTGATCTAAGTAAATATAAAAATAACATACTGAAAAAGTTTGAATATATTTGATGATTCTCAAACATGAATATGAAGTGCACGTTTGCTTGAGAAATTGTGACTTTCAGTTTAAATATTCTACTTTTTGAATGTATATTGTTAATCCTGTGAAGGTATCCCTTATGAAGAAACTACGCCATCCTAATATACTTCTCTTCATGGGTGCGGTTACATCTCCACAACGCCTCTGTATCGTAACAGAGTTCCTCCCACGGTATATCCCCTACCTTTTAAAGACAGCTTAGATTTTTGAATTATCTAATTGATTACTATGTGTATGTAGTATTGCTCTCTTGCAAGGCTACCTGCGATTGAGCAGAGCTGCTTGTTTAAATTTGGTTATATCGTTGATTTTGTAATAAGTTATCAAGGAATTAATGTTTAAGGCCCCCCCCCACCCCCCACCCCAACCAGACACACAAAAAAATAATTCAGGATAACATAGGAATCATTATCCCTTTCCCCTTGATAAGCATATTACGATGACAGTGATGGACTAAAGAAATTGAAGCGGGCCACTCTATTATTATGCACCGTGCAGTGTTTGGCCTGGGAACAAAATCTTAGGTTCACTCTTTAGAAATGATTTTTCCAGCTACAGATAGATGTATTGCCTACCATAATAATAAATCAAGACTTCGCTAAAAGTTTTACTTGGATTGGTTCTATTCATATTTTGAATAGCTGATCCTTTTCTTGTACTTACACAATATTTCATCTAGGTCTCATTTTCATCACATTGTTTCTCGAATGCAGTGGAAGTTTGTTTCGCTTACTTCAAAGGAACAATACCAAGTTGGATTGGAGACGACGTGTTCACATGGCTTTAGATATTGTAAGTTCATTTAATTTAATTTGTGAACATAAGTTATATATGGATTTTTGTCATATATCAAGTCAGCAACAGATCCAAGGTTTAGTAAAAGTTGCAGTAAATGATAGGGCAACCAGTGCAACATTCTCTGATCACAGTGTCTAATAATAGATATTGAGTAAAGTTAGAATCTAAAAGTTTTTTTATTGACCGAAAGAATCAAAAGGTGATTGTGCTGCATGAACTTGAAAGTTGAATTGCAACATCGCATGTAAAAAAAAGCCACGTGTCTCAGCAAGTAGTTTTGGGCCAGCTCAGTTTTGCTTCATATTTGAGTGATGAACTTGTTAATCTCTGTATAATTAATATTTTTTTATTATCTTACATTTGTTTGCCATATGTATAATTCTTTAGCAGTTGTTAGTTAGTTTTTTTTTATTTTTTTTTTAAAAAATACTTCTACAGGCAAGGGGGATGAACTATCTTCACCATTCCAGCCCACCTATTATTCATCGGGATTTAAAATCATCCAATCTTTTGGTTGATAAGAACTGGACTGTCAAGGTACAGTGAAGTTAATTTGCATTCCAGGCCTTTTTGCTTTTTTTGCTTGCCGCCTCACATTTTATCCGACTTAATCAGGTTGCAGATTTTGGTCTTTCACGTCTCAAGCGTGAAACATTCCTGACAACAAAAACTGGAAAAGGAACAGTAAGTACCAGCATGCATAATGTGATTAGCAGAAGAGCTTTCCCTTGCAGTTTGCCCTGATTAACTCTATTGATGTTGACTTGATATCCAGCCACAATGGATGGCTCCAGAGGTGTTGCGCAATGAGCCTTCTGACGAGAAGTAAGTTGGGACAGTCCTAATCAATAAAAAATCCTAGTCATGTCTGTAGAAAATGATTACTAATGCTTTCCATTGCTATATAGGTCTGATGTTTATAGTTATGGGGTCATCCTGTGGGAGCTTGTTACTCAGAAGATACCCTGGGAAAATCTTAATTCGATGCAGGTATATTCTTTTGTCTTTAAAACTTATTTTGACCATATGTTTGGTTATAGTTATGACCACTAGATTGTTAAGAGCAATATTTATTTTAGCAGCTTCATGTAATGTAAAAAAATATTTGGATGACAGTTATCATAGAAGTAAGCAATAGAATTAACCATTTTTGTCGGCTACATTGCTTTTCCTTTCATTTTGGTACTACAACATGAGCTAGGGCCTAGGAGATGGTGCATATGGATGTTGAATCAAACTCTTTGAATGTAATGCTGGTATGATTGTTCACCCAGAAATTTGAACTTTGGGCTTACAAGAAACAGTTATTGTCTTTTTGTATTTGTGATTTTGTAGAGACCAGAAATTTCCCAAGATAGTGATATTTTACTGAGTAGCCCAGCATGTTTGCGCGTTGTAACTCTTATTGGGCTAATTCTTTCTTATATCATACTTGTTGTCAAAGTTTTGACTAGGGTCGTATTAATTTGTGAGACTGTTTCTTATGTAGGTCATTGGTGCAGTTGGTTTCATGAACCACAGGTTGGAGATTCCTAGTGAAACAGATCCTCAGTGGACATCACTTATCCTGAGTTGTTGGGAAACGTATGCACTCTTTTTTCCCTTTGCTTTTTACGGTTCATGAAAAGTTACCTTTTTTCTTTATTATGTCTTTTGATGGACTTGAACTTCTCAAACCCTCATCTTCATTGAATGAAGTTGTATTCTCTTGCCTGTTACATTTTCTGATGACAAACATATCCTTGCTGTGAACAGTGACTCACAACTCCGTCCATCGTTCCAACAACTTCTGGAGAGACTTCGAGAGCTGCAAAGGCAGTACAATGTCCAGACTCAGATGCAGCGAAATGCATCCGCTGCTGCAAAAAATAGCAGCATTGAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA037595