Difference between revisions of "BGIOSGA009556"

From RiceWiki
Jump to: navigation, search
(Created page with "{{IndicaGene| GeneName = BGIOSGA009556| Description = cDNA clone:001-039-F07, full insert sequencecDNA| Definition = Oryza sativa Indica Group BGIOSGA009556, complete gene....")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA009556|
 
GeneName = BGIOSGA009556|

Revision as of 15:29, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA009556

Description

cDNA clone:001-039-F07, full insert sequencecDNA

Definition

Oryza sativa Indica Group BGIOSGA009556, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA009556-TA

Ensembl Protein ID

BGIOSGA009556-PA

Length

956

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:38745981..38746936

Sequence Coding Region

38746840..38746936,38746581..38746742,38746281..38746504,38745981..38746199

Genome Context

<gbrowseImage1> name=IndicaChromosome03:38745981..38746936 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:38745981..38746936 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCCGTGTCGGAGGTGGAGGTCGACGGCGTCGTGTTCCCGCCGGTGGCCCGCCCGCCGGGCTCCGGCCACGCCCACTTCCTCGCCGGCGCAGGTGTGAGGGGAGTGGAGATCGCCGGCAACTTCATCAAGTTCACGGCCATCGGCGTGTACCTGGAGGAGGGCGCGGCCGTGCCGGCGCTGGCCAAGAAGTGGGCCGGCAAGTCCGCCGACGAGCTCGCCGCCGACGCCGCCTTCTTCCGCGACGTCGTCACCGGCGATTTCGAGAAGTTCACGAGGGTGACGATGATCCTGCCGCTCACCGGCGAGCAGTACTCGGACAAGGTGACGGAGAACTGCGTCGCGGCGTGGAAGGCCGCCGGCGTGTACACGGACGCCGAGGGCGCGGCCGCGGACAAGTTCAAGGAGGCCTTCAAGCCCCACAGCTTCCCTCCGGGCGCGTCCATCCTCTTCACCCACTCCCCGCCCGGCGTCCTCACCGTCGCGTTCTCCAAGGACTCGTCGGTGCCAGAGGGCGCCGTGGCGGCGGCGGCGATCGAGAACAGGGCGCTCTGCGAGGCGGTGCTGGATTCCATCATCGGCGAGCACGGGGTCTCGCCGGCGGCGAAGCGGAGCATAGCGGCCCGCGTCTCGCAGCTCCTGAAGGCGGAATCCACCGGCGACGTGGCGGCGGCGGAGCCCGCGCCGGTGTCCGCGTGA</cdnaseq>

Protein Sequence

<aaseq>MAAVSEVEVDGVVFPPVARPPGSGHAHFLAGAGVRGVEIAGNFIKFTAIGVYLEEGAAVPALAKKWAGKSADELAADAAFFRDVVTGDFEKFTRVTMILPLTGEQYSDKVTENCVAAWKAAGVYTDAEGAAADKFKEAFKPHSFPPGASILFTHSPPGVLTVAFSKDSSVPEGAVAAAAIENRALCEAVLDSIIGEHGVSPAAKRSIAARVSQLLKAESTGDVAAAEPAPVSA</aaseq>

Gene Sequence

<dnaseqindica>1..97#195..356#433..656#738..956#ATGGCGGCCGTGTCGGAGGTGGAGGTCGACGGCGTCGTGTTCCCGCCGGTGGCCCGCCCGCCGGGCTCCGGCCACGCCCACTTCCTCGCCGGCGCAGGTTTGTTTGTGTTTGCGTTGTGTGTTCCGTGTCAGTGGAGAAGTGGAAATGCCGTGCAAGCGAACTTGCTTGCTGGTTTGATCGATCCGTCGTGCAGGTGTGAGGGGAGTGGAGATCGCCGGCAACTTCATCAAGTTCACGGCCATCGGCGTGTACCTGGAGGAGGGCGCGGCCGTGCCGGCGCTGGCCAAGAAGTGGGCCGGCAAGTCCGCCGACGAGCTCGCCGCCGACGCCGCCTTCTTCCGCGACGTCGTCACCGGTAACTCATCTCGCTAAATTTGTTGCTCGTGTCGACGGGCGGCGCGACATGACATGGGCGTCGTCTCGCGTTGCAGGCGATTTCGAGAAGTTCACGAGGGTGACGATGATCCTGCCGCTCACCGGCGAGCAGTACTCGGACAAGGTGACGGAGAACTGCGTCGCGGCGTGGAAGGCCGCCGGCGTGTACACGGACGCCGAGGGCGCGGCCGCGGACAAGTTCAAGGAGGCCTTCAAGCCCCACAGCTTCCCTCCGGGCGCGTCCATCCTCTTCACCCACTCCCCGCCCGGCGTCCTCACCGTGAGCACCAATCCGTTGTTGCCGATTACTCCGATGCGTGATTTGCTTCGTGATTTGGACTCCGTTTGATTCGATTTGCAGGTCGCGTTCTCCAAGGACTCGTCGGTGCCAGAGGGCGCCGTGGCGGCGGCGGCGATCGAGAACAGGGCGCTCTGCGAGGCGGTGCTGGATTCCATCATCGGCGAGCACGGGGTCTCGCCGGCGGCGAAGCGGAGCATAGCGGCCCGCGTCTCGCAGCTCCTGAAGGCGGAATCCACCGGCGACGTGGCGGCGGCGGAGCCCGCGCCGGTGTCCGCGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009556