Difference between revisions of "BGIOSGA009600"
(Created page with "{{IndicaGene|
GeneName = BGIOSGA009600|
Description = cDNA clone:J023059I02, full insert sequence|
Definition = Oryza sativa Indica Group BGIOSGA009600, complete gene.|
ta...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{IndicaGene| | {{IndicaGene| | ||
GeneName = BGIOSGA009600| | GeneName = BGIOSGA009600| | ||
Revision as of 15:30, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
BGIOSGA009600 |
|---|---|
| Description |
cDNA clone:J023059I02, full insert sequence |
| Definition |
Oryza sativa Indica Group BGIOSGA009600, complete gene. |
| LocusTag |
' |
| Ensembl Transcript ID |
BGIOSGA009600-TA |
| Ensembl Protein ID |
BGIOSGA009600-PA |
| Length |
5189 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:38147686..38152874 |
| Sequence Coding Region |
38152863..38152874,38152543..38152729,38151960..38152210,38151758..38151857,38151493..38151679 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome03:38147686..38152874 source=RiceIndica03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome03:38147686..38152874 source=RiceIndica03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGGACGGTGCGAAATCGGGGAAGCAATGCCATGTCTGCCAGATCTGCGGCGACGGCGTGGGCACGGCGGCGGACGGCGAGCTCTTCACCGCCTGCGACGTCTGCGGGTTCCCGGTGTGCCGGCCATGCTACGAGTACGAGCGCAAGGACGGCAGCCAGGCGTGCCCGCAGTGCAAGACCAAGTACAAGCGCCACAAGGGGAGCCCGCCGATACTTGGGGATGAAAGCGATGATGTTGATGCGGATGATGCTAGTGATGTGAACTATCCAACATCCGGCAACCAGGACCATAAGCACAAGATTGCCGAGAGGATGCTCACCTGGCGCATGAACTCTGGGAGGAATGATGATATTGTCCATTCTAAGTATGATAGTGGTGAGATTGGTCATCCCAAGTATGACAGTGGTGAAATCCCTCGCATATATATCCCATCGCTCACTCACAGCCAGATCTCAGGTGAAATTCCTGGAGCGTCCCCTGATCATATGATGTCTCCCGTTGGGAACATTGGCAGACGTGGGCATCCATTTCCCTATGTGAACCATTCACCAAACCCATCAAGGGAGTTTTCTGGTAGCCTTGGCAATGTTGCATGGAAAGAGAGAGTAGATGGCTGGAAAATGAAGGATAAAGGTGCAATTCCCATGGCTAATGGTACTAGCATTGCTCCTTCAGAAGGTCGTGGGGTTGGTGACATTGATGCATCTACTGACTATAACATGGAGGACGCCTTACTGAATGATGAAACACGCCAACCTCTATCGAGAAAAGTGCCAATTTCGTCATCCAGAATAAATCCGTACAGGATGGTTATTGTGCTCCGATTGATTGTCCTATGTATATTCTTGCACTACCGTATCACAAATCCTGTGCGTAATGCATACCCGCTATGGTTGCTCTCTGTCATATGTGAGATTTGGTTTGCTCTATCCTGGATTCTGGATCAGTTCCCCAAGTGGTCCCCAATCAACCGTGAAACTTACCTGGATAGGCTGGCTTTAAGGTATGACCGGGAAGGTGAACCATCTCAATTGGCTCCTGTTGACATTTTTGTCAGTACTGTGGATCCTATGAAAGAACCTCCTCTTGTCACTGCCAATACTGTGCTCTCCATCCTTGCTGTGGATTACCCTGTTGATAAGGTATCTTGCTATGTGTCTGATGATGGAGCTGCAATGTTAACATTTGATGCGCTTGCTGAGACTTCAGAATTTGCTAGAAAATGGGTACCGTTCTGTAAAAAGTACAGCATAGAACCCAGAGCTCCAGAGTGGTACTTTGCACAGAAAATTGATTACTTGAAAGACAAAGTTCAGGCTTCTTTTGTTAAAGATCGTCGTGCCATGAAGAGGGAATATGAAGAATTTAAAGTTCGTGTTAATGCTCTCGTCGCCAAGGCACAGAAAGTTCCTGAGGAAGGATGGATTATGCAAGATGGCACACCTTGGCCTGGTAACAATACCAGAGACCATCCTGGAATGATTCAGGTTTTCCTTGGTCATAGTGGAGGCCTTGATACCGAAGGCAATGAGCTTCCTCGTTTAGTCTATGTGTCTCGTGAGAAACGTCCTGGATTCCAACACCATAAAAAGGCTGGTGCTATGAATGCACTTGTTCGTGTATCAGCTGTCCTTACTAATGGACAATACTTGTTGAATCTTGACTGTGATCACTACATCAACAATAGCAAAGCTCTCCGAGAGGCTATGTGCTTCCTTATGGATCCAAACCTAGGAAGGCGTGTCTGTTATGTCCAATTCCCTCAGAGGTTTGACGGTATCGATAGAAATGATCGATATGCAAACAGGAACACCGTGTTTTTCGATATTAATTTGAGAGGTCTCGATGGTCTCCAAGGACCAGTTTATGTGGGAACCGGTTGTGTGTTCAACAGAACAGCTCTTTATGGTTATGAACCCCCCATTAAGCAGAAGAGGCCAGGTTACTTCTCTTCGCTTTGTGGGGGACGAAAGAAGACAAAAAAGTCGAAGGAGAAGAGCACGGAAAAGAAAAAGTCACACAAACATGTGGACAGTTCTGTGCCAGTTTTTAATCTTGAAGATATAGAGGAAGGGATTGAAGGTTCTGGATTTGATGATGAGAAATCACTACTGATGTCTCAAATGAGCTTAGAGAAAAGATTTGGTCAATCTAGTGTTTTTGTAGCCTCCACTCTGATGGAATATGGTGGTGTTCCTCAATCCGCAACTCCAGAATCTCTTCTGAAAGAGGCCATACATGTTATCAGCTGTGGCTATGAAGACAAAAGTGACTGGGGAACTGAGATTGGATGGATCTATGGTTCTGTTACAGAAGATATTCTCACTGGATTCAAGATGCATGCACGTGGCTGGCGGTCAATCTACTGCATGCCTAAGCGACCAGCATTCAAGGGGTCTGCCCCAATTAATCTTTCGGATCGTCTGAACCAGGTGCTTCGGTGGGCTCTTGGTTCTGTGGAAATTCTTTTTAGCAGGCATTGTCCCATATGGTATGGGTACGGAGGACGGCTTAAGTTCCTGGAGAGATTTGCTTACATCAACACCACTATTTATCCACTCACATCGATTCCACTCCTCTTGTACTGCATATTGCCAGCTATCTGTCTTCTCACTGGGAAGTTCATCATACCAGAGATTAGCAACTTTGCGAGTATTTGGTTTATCTCTCTCTTTCTGTCAATCTTTGCTACTGGTATCCTTGAGATGAGGTGGAGTGGTGTTGGCATCGATGAATGGTGGAGGAATGAGCAGTTTTGGGTTATTGGAGGTATTTCCGCTCATCTATTTGCGGTCTTCCAGGGTCTGCTGAAGGTGCTTGCTGGAATTGATACCAGCTTCACTGTCACCTCAAAGGCCTCTGATGAAGAAGGCGATTTCGCTGAGCTCTACATGTTCAAGTGGACAACCCTTCTGATCCCACCGACCACTATTTTGATCATCAACCTGGTCGGTGTTGTTGCTGGTATCTCCTACGCTATCAACAGTGGCTACCAGTCATGGGGTCCGCTCTTTGGGAAGCTCTTCTTTGCCTTCTGGGTGATTGTCCACCTGTACCCCTTCCTTAAGGGTCTCATGGGTCGGCAGAACCGTACACCGACCATTGTTGTTGTTTGGGCCATCCTCCTTGCATCGATCTTCTCCTTGCTGTGGGTTCGTATCGATCCATTCACCACCCGTGTCACAGGCCCTGATACCCAAAAATGTGGTATCAACTGCTAG</cdnaseq> |
| Protein Sequence |
<aaseq>MDGAKSGKQCHVCQICGDGVGTAADGELFTACDVCGFPVCRPCYEYERKDGSQACPQCKTKYKRHKGSPPILGDESDDVDADDASDVNYPTSGNQDHKHKIAERMLTWRMNSGRNDDIVHSKYDSGEIGHPKYDSGEIPRIYIPSLTHSQISGEIPGASPDHMMSPVGNIGRRGHPFPYVNHSPNPSREFSGSLGNVAWKERVDGWKMKDKGAIPMANGTSIAPSEGRGVGDIDASTDYNMEDALLNDETRQPLSRKVPISSSRINPYRMVIVLRLIVLCIFLHYRITNPVRNAYPLWLLSVICEIWFALSWILDQFPKWSPINRETYLDRLALRYDREGEPSQLAPVDIFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFDALAETSEFARKWVPFCKKYSIEPRAPEWYFAQKIDYLKDKVQASFVKDRRAMKREYEEFKVRVNALVAKAQKVPEEGWIMQDGTPWPGNNTRDHPGMIQVFLGHSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGQYLLNLDCDHYINNSKALREAMCFLMDPNLGRRVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGLQGPVYVGTGCVFNRTALYGYEPPIKQKRPGYFSSLCGGRKKTKKSKEKSTEKKKSHKHVDSSVPVFNLEDIEEGIEGSGFDDEKSLLMSQMSLEKRFGQSSVFVASTLMEYGGVPQSATPESLLKEAIHVISCGYEDKSDWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTSIPLLLYCILPAICLLTGKFIIPEISNFASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGISAHLFAVFQGLLKVLAGIDTSFTVTSKASDEEGDFAELYMFKWTTLLIPPTTILIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWAILLASIFSLLWVRIDPFTTRVTGPDTQKCGINC</aaseq> |
| Gene Sequence |
<dnaseqindica>1..12#146..332#665..915#1018..1117#1196..1382#1678..1944#2038..2383#2472..2609#2692..2817#2903..3115#3275..3530#3726..3928#4172..4522#4605..5189#ATGGACGGTGCGGTGAGTCGCATTTTCGGGGGGAAAGATTCAAAGATTGGTTAATTTGTTGCGTGGATGTTTGGGTTGGTCTGAGCTCTGAAGCTTTTGCCTTTGTTTGTTTGTTTCGTTTGGTGTTGTTGTATGCGCGGCGAAGAAATCGGGGAAGCAATGCCATGTCTGCCAGATCTGCGGCGACGGCGTGGGCACGGCGGCGGACGGCGAGCTCTTCACCGCCTGCGACGTCTGCGGGTTCCCGGTGTGCCGGCCATGCTACGAGTACGAGCGCAAGGACGGCAGCCAGGCGTGCCCGCAGTGCAAGACCAAGTACAAGCGCCACAAGGGTATAAGTTGCACATTATCCATTCATCCTTCTCTTGGATTTCACCTAAATACTTCATCTTTGGTTAAGAACAGCTACATTGGACTGAACATCTCGTGAACCCAATCAGGTTGTTGCATATTGCATTTAGACAATAATAGTAGAGAAGATATATATATGCTTAGTGAATATGCTGAGTTAATAGCACAGAGTCCTGTTCTTTAGTGAGCTGTATTCGAAGTTGGTAGTGACCAGTGACAACATAATTTCTTTCCTGTATGGGTTATTTCCATTGAGAGAAGCAAATGTGAGTGAATTTGTTGAGCTTAACAAGATATTTAATCTTTGCTTCAGGGAGCCCGCCGATACTTGGGGATGAAAGCGATGATGTTGATGCGGATGATGCTAGTGATGTGAACTATCCAACATCCGGCAACCAGGACCATAAGCACAAGATTGCCGAGAGGATGCTCACCTGGCGCATGAACTCTGGGAGGAATGATGATATTGTCCATTCTAAGTATGATAGTGGTGAGATTGGTCATCCCAAGTATGACAGTGGTGAAATCCCTCGCATATATATCCCATCGCTCACTCACAGCCAGGTTTGTTAGAATTTTTGTTGATAGCGTGAAGTCGTTAACCCTTCAGGGTATGTGCAAAGATTGAACTAATATTTAGTTTCTTCCTCTCGATTAATTCTATAGATCTCAGGTGAAATTCCTGGAGCGTCCCCTGATCATATGATGTCTCCCGTTGGGAACATTGGCAGACGTGGGCATCCATTTCCCTATGTGAACCATTCACGTAAGTTTATCTATCATCAAGATCTCATGTTTCGTTGCATCGACTGGGAAAATTTAATTATTCTTTGTTGCTCAACAGCAAACCCATCAAGGGAGTTTTCTGGTAGCCTTGGCAATGTTGCATGGAAAGAGAGAGTAGATGGCTGGAAAATGAAGGATAAAGGTGCAATTCCCATGGCTAATGGTACTAGCATTGCTCCTTCAGAAGGTCGTGGGGTTGGTGACATTGATGCATCTACTGACTATAACATGGAGGACGCCTTACTGTGAGTTCTGATATGCTTTTGTCCACCGTTAGTCATCTATGAATTCTACCAGTAATTAATATTCCTTGTATCTGGTGTACTAACTTGCACTAGTTTGTACTTGGAAGAACATAGGAAAAATTCTTGCATAATTCGAAATATAATTATTTTGTGTTTACAAGTATACCTTGCTATTAAGCAAGGCAATATGCACATTTAATGGATCAGATTCTAAATGGTTGTACATCTCTGAACCTTATAATGCGGACTTATCATATAGCTTGCCACTATAAATGTTGTGCTATCTGTATTACAGGAATGATGAAACACGCCAACCTCTATCGAGAAAAGTGCCAATTTCGTCATCCAGAATAAATCCGTACAGGATGGTTATTGTGCTCCGATTGATTGTCCTATGTATATTCTTGCACTACCGTATCACAAATCCTGTGCGTAATGCATACCCGCTATGGTTGCTCTCTGTCATATGTGAGATTTGGTTTGCTCTATCCTGGATTCTGGATCAGTTCCCCAAGTGGTCCCCAATCAACCGTGAAACTTACCTGGATAGGCTGGCTTTAAGGTGATGTACAATATTTACCTCTGATACACCATTCCTGCGTTAGCACTGTAGTACTGATTACTGACAATAACAAAATATCACTTGCACTCTCAGGTATGACCGGGAAGGTGAACCATCTCAATTGGCTCCTGTTGACATTTTTGTCAGTACTGTGGATCCTATGAAAGAACCTCCTCTTGTCACTGCCAATACTGTGCTCTCCATCCTTGCTGTGGATTACCCTGTTGATAAGGTATCTTGCTATGTGTCTGATGATGGAGCTGCAATGTTAACATTTGATGCGCTTGCTGAGACTTCAGAATTTGCTAGAAAATGGGTACCGTTCTGTAAAAAGTACAGCATAGAACCCAGAGCTCCAGAGTGGTACTTTGCACAGAAAATTGATTACTTGAAAGACAAAGTTCAGGCTTCTTTTGTTAAAGATCGTCGTGCCATGAAGGTAAATTTGGTTTATATGTGTGTACTTTTTTGTTGTTTTTTTTTTGGTGTAATCTCGCATTAATGTCTGTTGCAAAACCAAAATCCAGAGGGAATATGAAGAATTTAAAGTTCGTGTTAATGCTCTCGTCGCCAAGGCACAGAAAGTTCCTGAGGAAGGATGGATTATGCAAGATGGCACACCTTGGCCTGGTAACAATACCAGAGACCATCCTGGAATGATTCAGGTAAATATCACTTAGATATTGCCATTGTGGTGTGGTTATTGATCCAGCAATTTTCTTACTCTTGACGTCTGGTCATGCTCAGGTTTTCCTTGGTCATAGTGGAGGCCTTGATACCGAAGGCAATGAGCTTCCTCGTTTAGTCTATGTGTCTCGTGAGAAACGTCCTGGATTCCAACACCATAAAAAGGCTGGTGCTATGAATGCACTTGTGAGTAGCAGCTAGAGTGGTGTTGCTTAAGTGAGAAGTATCTTGTTTAATTCATTTACTTGATATGTGGAATTTGAAACTGCAGGTTCGTGTATCAGCTGTCCTTACTAATGGACAATACTTGTTGAATCTTGACTGTGATCACTACATCAACAATAGCAAAGCTCTCCGAGAGGCTATGTGCTTCCTTATGGATCCAAACCTAGGAAGGCGTGTCTGTTATGTCCAATTCCCTCAGAGGTTTGACGGTATCGATAGAAATGATCGATATGCAAACAGGAACACCGTGTTTTTCGATGTAAGCTTGGTTCCCTTTAAGATTCTTGGATGCTTCACTTCACGCTTTAGCAAACATCAATAACTGTTGATGGATCAGCAATATTTATGTTTCTATGTGATGGATTTGAACATTTCTGGAGTTTGTCAAGTAACTTATCTGCATTTCTGCTTGCTGCAGATTAATTTGAGAGGTCTCGATGGTCTCCAAGGACCAGTTTATGTGGGAACCGGTTGTGTGTTCAACAGAACAGCTCTTTATGGTTATGAACCCCCCATTAAGCAGAAGAGGCCAGGTTACTTCTCTTCGCTTTGTGGGGGACGAAAGAAGACAAAAAAGTCGAAGGAGAAGAGCACGGAAAAGAAAAAGTCACACAAACATGTGGACAGTTCTGTGCCAGTTTTTAATCTTGAAGATATAGAGGAAGGGATTGAAGGTACCATCGAGTCTGGTTTTTGTTCAATTACATGTTTTTGCTCTTAGATTTTTAGTGATATTTGGCCACCACCATTGCATTGCACCCCACAACTTTTTTCGCAGTATTTCTGTATATGCTTAGGAAGGGAGGGACACTAGGCTTAACTTTTCTCTTACACTATATATTTGACCTGGCACATCATTTTTGTGGCAGGTTCTGGATTTGATGATGAGAAATCACTACTGATGTCTCAAATGAGCTTAGAGAAAAGATTTGGTCAATCTAGTGTTTTTGTAGCCTCCACTCTGATGGAATATGGTGGTGTTCCTCAATCCGCAACTCCAGAATCTCTTCTGAAAGAGGCCATACATGTTATCAGCTGTGGCTATGAAGACAAAAGTGACTGGGGAACTGAGGTAATAAAGCTATGGCATTCATGCTCTGCATTACATGCTACTAGCCTACCAGTACAAATTATACAATGTAACAGAAAATGTCGAGATATCAAGTGGTCTTTCTTGTACAAAATTAAGGACGCAATTTGATTTCTGTTCTGATTCGCACAAGTACTTCTGAGTTCATGCGAAGAAACTTGACTAAATTGGCATCTCCTCTCAGTTGCCATTATAACTTTGTTTATGATGCTATGTGACTTGCAGATTGGATGGATCTATGGTTCTGTTACAGAAGATATTCTCACTGGATTCAAGATGCATGCACGTGGCTGGCGGTCAATCTACTGCATGCCTAAGCGACCAGCATTCAAGGGGTCTGCCCCAATTAATCTTTCGGATCGTCTGAACCAGGTGCTTCGGTGGGCTCTTGGTTCTGTGGAAATTCTTTTTAGCAGGCATTGTCCCATATGGTATGGGTACGGAGGACGGCTTAAGTTCCTGGAGAGATTTGCTTACATCAACACCACTATTTATCCACTCACATCGATTCCACTCCTCTTGTACTGCATATTGCCAGCTATCTGTCTTCTCACTGGGAAGTTCATCATACCAGAGGTAAATATGTAGAATTGTTTTTCCTCTTCTGCAGACGAAATCGCAGAACAGCATGCGCTGACTGACTTATTTTGGACTGCAGATTAGCAACTTTGCGAGTATTTGGTTTATCTCTCTCTTTCTGTCAATCTTTGCTACTGGTATCCTTGAGATGAGGTGGAGTGGTGTTGGCATCGATGAATGGTGGAGGAATGAGCAGTTTTGGGTTATTGGAGGTATTTCCGCTCATCTATTTGCGGTCTTCCAGGGTCTGCTGAAGGTGCTTGCTGGAATTGATACCAGCTTCACTGTCACCTCAAAGGCCTCTGATGAAGAAGGCGATTTCGCTGAGCTCTACATGTTCAAGTGGACAACCCTTCTGATCCCACCGACCACTATTTTGATCATCAACCTGGTCGGTGTTGTTGCTGGTATCTCCTACGCTATCAACAGTGGCTACCAGTCATGGGGTCCGCTCTTTGGGAAGCTCTTCTTTGCCTTCTGGGTGATTGTCCACCTGTACCCCTTCCTTAAGGGTCTCATGGGTCGGCAGAACCGTACACCGACCATTGTTGTTGTTTGGGCCATCCTCCTTGCATCGATCTTCTCCTTGCTGTGGGTTCGTATCGATCCATTCACCACCCGTGTCACAGGCCCTGATACCCAAAAATGTGGTATCAACTGCTAG</dnaseqindica> 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| External Link(s) |
