Difference between revisions of "BGIOSGA010552"

From RiceWiki
Jump to: navigation, search
(Created page with "{{IndicaGene| GeneName = BGIOSGA010552| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010552, complete gene.| tag = OSJNBA0...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA010552|
 
GeneName = BGIOSGA010552|

Revision as of 15:34, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA010552

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010552, complete gene.

LocusTag

OSJNBA0030J19.14

Ensembl Transcript ID

BGIOSGA010552-TA

Ensembl Protein ID

BGIOSGA010552-PA

Length

3852

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:18721345..18725196

Sequence Coding Region

18724771..18725196,18724525..18724660,18722669..18722805,18722151..18722274,18721512..18722002
,18721345..18721395

Genome Context

<gbrowseImage1> name=IndicaChromosome03:18721345..18725196 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:18721345..18725196 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGAGGAAGAAGGAGAGGTCAGGGTGGGGGAGCCTGTTCAGGGGATGCCTGAGCGGAGGAGGCGCGGCGGGGAGCCGGAAGGTGCGACCGGGGCCGAGGACGGCGGCGGCGGCGGCGGCGAAGCACGGCGGAGGAGCATCATCGGCGGCGGCGCAGCGGCTGTCGTTCACGGACGTGATGAGCACGGCGTCGGAGCAGGAGCTGTCGGTGTCGCTGGTGGGGTCGAACCTGCACGTGTTCACGGTGGGGGAGCTGAAGGCGGCGACGCAGGGGTTCCTCGACGGCAACTTCCTCGGCGAGGGCGGCTTCGGCCCCGTCTACAAGGGCAACGTCGCCGACAAGGCCAAGCCGGGCCTCAAGGCCCAGCCCATCGCCGTCAAGCTCTGGGACCCCGAGGGCGCCCAGGGTCACAAAGAATGGCTGTCGGAGGTGATCTTCCTTGGGCAGCTCAGGCACCCCAACCTGGTGAAGCTCATCGGCTACTGCTGCGAGGACGAGCACCGCCTGCTCGTCTACGAGTACATGGCCAAGGGCAGCCTCGAGAACCACCTCTTCAAGAAGTTTCCTTCGATGCTGTCGTGGTCAACCCGGTTGAACATCGCGGTTGGCGCCGCCAAGGGCCTCGTCTTCCTTCACGACGCCGAGAAGCCCGTCATCTACCGCGACTTCAAGACCTCCAACATCCTACTCGACCCGGAGTACAAGGCGAAGCTGTCGGACTTTGGGCTGGCCAAAGATGGGCCGGAGGGCGACGACACCCACGTCTCCACACGCGTCATGGGCACCCACGGCTACGCCGCACCGGAGTACATCCTCACCGGTCACCTTACAGCAAAGAGCGACGTATACAGCTTTGGTGTCGTTCTGCTAGAGATCCTATCCGGGCGACGGGCTGTGGACAAGACACGACCTAGCAGGGAGCAGCATCTAGTCGAACACATGCGCTCCTGGCTCAAGGATCCACAGAAGTTAAGCCGAGTCATGGACCCGGCCCTGGAGGGCCAGTACTTCGCTACCGCGGCTCATAAGGCGGCCCTGGTGGCGTATAAGTGCCTGAGCGGTAACCCCAAAAATAGACCGGACATGTGTCAAGTCGTGAAAGACCTAGAGCCCCTCCTCAATGTCACCGATGATGTCTCTGATGAGTCGGTGGCACCCATAGCCCCGGTAAGGGAGGATAATGCTGTGAGAAAGGAAAGAACAGCAAGGAGAAGGCCCGGTGAGAGGGATGGTGGAAAACTTAGGCAAAGTAAAATGCGTTCACCCCAGAAGGTCGTTAGGAGACGTCCAGGCCAAAGCGAGGAGTTTTGGATGGTGGTGCAGCCGGTGGTCACTGGCCAGGAAGGATTGCACCCCCTGTAA</cdnaseq>

Protein Sequence

<aaseq>MTRKKERSGWGSLFRGCLSGGGAAGSRKVRPGPRTAAAAAAKHGGGASSAAAQRLSFTDVMSTASEQELSVSLVGSNLHVFTVGELKAATQGFLDGNFLGEGGFGPVYKGNVADKAKPGLKAQPIAVKLWDPEGAQGHKEWLSEVIFLGQLRHPNLVKLIGYCCEDEHRLLVYEYMAKGSLENHLFKKFPSMLSWSTRLNIAVGAAKGLVFLHDAEKPVIYRDFKTSNILLDPEYKAKLSDFGLAKDGPEGDDTHVSTRVMGTHGYAAPEYILTGHLTAKSDVYSFGVVLLEILSGRRAVDKTRPSREQHLVEHMRSWLKDPQKLSRVMDPALEGQYFATAAHKAALVAYKCLSGNPKNRPDMCQVVKDLEPLLNVTDDVSDESVAPIAPVREDNAVRKERTARRRPGERDGGKLRQSKMRSPQKVVRRRPGQSEEFWMVVQPVVTGQEGLHPL</aaseq>

Gene Sequence

<dnaseqindica>1..426#537..672#2392..2528#2923..3046#3195..3685#3802..3852#ATGACGAGGAAGAAGGAGAGGTCAGGGTGGGGGAGCCTGTTCAGGGGATGCCTGAGCGGAGGAGGCGCGGCGGGGAGCCGGAAGGTGCGACCGGGGCCGAGGACGGCGGCGGCGGCGGCGGCGAAGCACGGCGGAGGAGCATCATCGGCGGCGGCGCAGCGGCTGTCGTTCACGGACGTGATGAGCACGGCGTCGGAGCAGGAGCTGTCGGTGTCGCTGGTGGGGTCGAACCTGCACGTGTTCACGGTGGGGGAGCTGAAGGCGGCGACGCAGGGGTTCCTCGACGGCAACTTCCTCGGCGAGGGCGGCTTCGGCCCCGTCTACAAGGGCAACGTCGCCGACAAGGCCAAGCCGGGCCTCAAGGCCCAGCCCATCGCCGTCAAGCTCTGGGACCCCGAGGGCGCCCAGGGTCACAAAGAATGGCTGGTAATTTAATTTACTTACTATACTTAATTGCTTCTAATTAATCAATCAATTAGGAGTAACAACTTTATTAGCCATGCAAATAATTAGTAATATTTTTGTGATGCATGCAGTCGGAGGTGATCTTCCTTGGGCAGCTCAGGCACCCCAACCTGGTGAAGCTCATCGGCTACTGCTGCGAGGACGAGCACCGCCTGCTCGTCTACGAGTACATGGCCAAGGGCAGCCTCGAGAACCACCTCTTCAAGAGTATGTACAATTATTCACCCTCCATTTCTTAATTAATTATATAACTTCTGCTAATTAGTTATGGTACACTGGTGGAGAAAGGGGCTTTACTCCCTGTTCATAACCCCTTGTAGTCTCCGTTTTCCAACCGGGACTATGAATCCGGGACTAAAGATCGCTATCTTTAGTCCCGGGTGAAAAAATAAAAAGTAAAAATCCATTTTTAGTCCCGGTTGGTGTTACCAACCGGGACTAAAGATAATCAACCGGGAGTAAAGTTTATATTGATCTTTTTCCCCGGTTGGTAACACCAACCGGGACTATAAATAGATCGTTAGTCCCGGTTGGTGACTAAAGATCAAAAAATTCCTTAGAGCTTTCAAACCGGGACTAAAGATGTTTTCAGTCCCGGTTTTTAATACAACCGGGACTATTGTGAAATCTGGTGGACCGACCAAAGATGGTTTCTCCACCAGTGGTACAAGTAGATTAGAGGGAGCACTACTCAATAATTAGGTTAATGTATATATTATTCTTTGTCGCTTACACATCTTATTAAGCTCCAAAGTTTCACACACACGCCGCAATTTATGTATAGTACTGTGTAAATCCTGTTTATATGGAGAAATTAGGTCCCTAATGACCGCACTAGTGGAGCAGATAATTAGCTATATATGCCATACGTACATGCCACTCCAGCATGGAGCACGCGCAATATATCATCTTCACTGACAGCTAGTAAGCTGGATAGATGGTATACATACTGGCCAGTGGTCAGCAGCTGTAGCTAGTTGATAATTGATTAGTCGACTACGTTTGATTTGATCGATTATGCTATACACATTGCGGCCGCATCAATCGCTGCTTGTTTTTGACATTGCTGACCCTCTCCTCCTTCCTGATCTGATCTTAATCTGACTAGATATATGCCGTTATATCTCCCTCCAAGAAAGTAATTTTCTACTCTGACTGATTAAGCATTTAGTTGGAATAAAATTCAAAACGAAAAGTCTAGCTAGATGTGGAAGAAGAATTAAAGGAAACTAGCTAGATGAGGTGGTTGTGGACAGTCTCATCTTAGATGAGCATATTGACTCCATTGGCTCCGTTTCACATTGATCATGCCATATATTCTCAGGTTAATTCGTTCGTTAGCTACTCAATTCCAGAAAGGGAATATATGTATTTATATGCACGAAGTACATGTTTTTAGGTCTAATTCCTGTGGACGCTGGGCGGATTTGATGACGATCGATCAAGAGAAAGCTAATTAAGTGCAAAGCAGCTAATTAAGCTAGTTGGAATAAGACCTAATAATTGGTAGTAGTTGTTGATAAAGTAGGCTTTTACATTCGCAGTGCCTGATGAATTTTCCATCCAAACTCGATCTACTGATTTAGTATGAATCATCCAGAAAAACCATTAATTAAGAAAAGGTTTGTTTGGCCGGACCAAATTAACAAATCAAAGCATGCAACTTGTGCACAAAACCTTGACTGGTCCACCACCTAACTGGTATACGATTCAGCAGCTGCTATTTTCTCTCTTTTTTTTTTGGGTTTGGTCATATGCAACTAGCCATGCATTTAGCTGTGCCTCACACACGCAAAGTAATGTAAAGTGAAGTAAGCAAATACTTCTAGTGATGCTTATATTTAACGAATTAATTAATCTTGACCATGGATTATTATTGAATTATGTAATAATTATATTTACTTTTCTTTTTCTTTTTATTTTCAGAGTTTCCTTCGATGCTGTCGTGGTCAACCCGGTTGAACATCGCGGTTGGCGCCGCCAAGGGCCTCGTCTTCCTTCACGACGCCGAGAAGCCCGTCATCTACCGCGACTTCAAGACCTCCAACATCCTACTCGACCCGGTAATTACACTTGTTATTAATTATTATTATTATTTCATTACACTTAAATTCTTCTAGAGATATTGATCAACCTAATTACTTTTCGTAGCATAACGTGATTTATTTATGGAGTTGACCTGATGCTTTACTCGTTCACACGAATCGAATTTATGGTGCATTAGTCAGAGGTTGGAAATTAAGTGCTCAGGTTACTAGTAAGTACAGTACAAAGTAGGTGATGCAGCGACTGATTGTCCTCGCGAGTCTGAACGCGCGAATGCACGCAGTAGTTCATGACTGGGCTAAAGCCCAACTGATATTTGGAGATCGTCTAACGTGGGCCGAGTAGAAGGCCCAGTAGTGATTAACTCGGCCTAGTAGATCGAAAAAGGCTAATTGAAGTGGCGTCGTGCAGGAGTACAAGGCGAAGCTGTCGGACTTTGGGCTGGCCAAAGATGGGCCGGAGGGCGACGACACCCACGTCTCCACACGCGTCATGGGCACCCACGGCTACGCCGCACCGGAGTACATCCTCACCGGTACGTATATGCACTATACACACACCTATACTATGTATACATATCTTTTCAACACCATCGATTCTTTTTCTCCTCTTGCAAACCTATAATGTACTAGTATCCTTTTTACAAATATTCTAACCAAATGCATCGTGTTATCATTTGTCAGGTCACCTTACAGCAAAGAGCGACGTATACAGCTTTGGTGTCGTTCTGCTAGAGATCCTATCCGGGCGACGGGCTGTGGACAAGACACGACCTAGCAGGGAGCAGCATCTAGTCGAACACATGCGCTCCTGGCTCAAGGATCCACAGAAGTTAAGCCGAGTCATGGACCCGGCCCTGGAGGGCCAGTACTTCGCTACCGCGGCTCATAAGGCGGCCCTGGTGGCGTATAAGTGCCTGAGCGGTAACCCCAAAAATAGACCGGACATGTGTCAAGTCGTGAAAGACCTAGAGCCCCTCCTCAATGTCACCGATGATGTCTCTGATGAGTCGGTGGCACCCATAGCCCCGGTAAGGGAGGATAATGCTGTGAGAAAGGAAAGAACAGCAAGGAGAAGGCCCGGTGAGAGGGATGGTGGAAAACTTAGGCAAAGTAAAATGCGTTCACCCCAGAAGGTCGTTAGGAGACGTCCAGGCCAAAGCGAGGAGTTTTGGGTGTGGCATATGCCTGGAGAAGTAAAATGCTAAATATCAAGTGTAATATATATATATCCGTAACCCGCAATGTAATGTTTTTGTGTAGTGACTGATGATGAGGATGTAAAATGTAGATGGTGGTGCAGCCGGTGGTCACTGGCCAGGAAGGATTGCACCCCCTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010552