Difference between revisions of "BGIOSGA011175"

From RiceWiki
Jump to: navigation, search
(Created page with "{{IndicaGene| GeneName = BGIOSGA011175| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA011175, complete gene.| tag = OsI_106...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA011175|
 
GeneName = BGIOSGA011175|

Revision as of 15:38, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA011175

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011175, complete gene.

LocusTag

OsI_10631

Ensembl Transcript ID

BGIOSGA011175-TA

Ensembl Protein ID

BGIOSGA011175-PA

Length

5306

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:7420671..7425976

Sequence Coding Region

7425722..7425976,7423604..7423715),complement(7423323..7423497,7422873..7423041),complement(7422575..7422793
,7422208..7422483),complement(7421970..7422123,7421645..7421698),complement(7421126..7421222
,7420671..7420896

Genome Context

<gbrowseImage1> name=IndicaChromosome03:7420671..7425976 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:7420671..7425976 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGAGGTCGCCGCCGGCACCGGGCAGCTCATTGGCGTCGCCGTGGCCACGCTCCTCGCGGCGATCTTCCTCGCCGCCGCGCTTCTTGGCAGCCGCCGGCGCCGGCGGCGGGCGCCGTTGGCAGGGAAGCCTGCGGCCGTGGGTGGCTGCGGGGTGGCCGACGGCGAAGGGTGCGGCGGGGATGGCCGGACCGACGTCATCGTCGTCGGAGCCGGGGTCGCCGGATCTGCGCTGGCATACACGCTCGGAAAGGATGGCCGTCGTGTGCATGTTATAGAGAGAGACCTAACAGAGCCTGATAGAATTGTCGGTGAACTGTTACAACCTGGTGGCTACCTGAAATTGATCGAGTTGGGTCTCGAGGATTGTGTTCAAGAAATAGATGCTCAGCGTGTCCTTGGTTACGCGTTATTCAAAGATGGGAAAGACACAAAACTCTCCTATCCCTTGGAGAAGTTCCACTCAGATGTTGCTGGTAGGAGCTTTCACAATGGACGGTTTATACAGAGGATGCGCCAGAAAGCTGCATCTTTGCCTAATGTTCAATTGGAGCAAGGAACTGTTACATCATTGGTTGAAGAAGATGGTACAGTTAAGGGTGTTAAATACAAGACCAAGTCAGGTGAAGAATTAAAAGCATATGCACCTCTGACAATTGTATGCGATGGCTGTTTCTCAAACCTTCGCCGCGCCCTTTGCTCTCCAAAGGTTGATGTACCATCTTGTTTTGTTGGGCTGGTCCTGGAGAATTGTCAACTTCCTCATGCAAACCATGGCCATGTTGTCCTGGCCAATCCTTCACCTATCCTATTTTACCCAATAAGCAGCACTGAAGTTCGCTGTTTGGTTGATGTCCCTGGTCAGAAGGTGCCTTCCATAGCAAACGGTGAAATGGCAAAATATCTCAAAACAGTGGTTGCACCTCAGATTCCTCCAGAAATCTATGATTCATTCATAGCAGCCATTGATAAGGGAAGCATAAGAACAATGCCAAACAGGAGCATGCCGGCTGCTCCACATCCAACCCCTGGTGCACTTTTGATGGGTGATGCATTCAACATGCGGCATCCTTTGACTGGTGGCGGAATGACTGTTGCATTATCTGACATTGTTGTGCTACGTAATCTTCTCAAGCCTCTCCGCAATCTGCATGATGCATCTGCTCTTTGCAAATACCTTGAATCATTCTATACACTGCGGAAGCCGGTTGCTTCTACCATAAACACATTAGCTGGTGCTCTATACAAGGTTTTCAGTGCCTCACCTGATCAGGCTAGGAATGAGATGCGCCAAGCCTGCTTTGATTACTTGAGCCTTGGAGGTGTCTTTTCAAATGGGCCTATTGCTCTTCTGTCTGAGTTTTCACTGCAGAGTGCATGTGGTATAATTTTCCCCATCATCAAAGCTGAAGTAAACAACATCATTAGGGCATTAGCAATGCGCCACCGTCTCAGCGAGAAGCCCAGCCTCCACATAGGCAAAAAACAGACGAAGCTCCTGTCTGCCCAGCGGCGCAAATCGAGGTGGGACAGGGCCGACGAGATCCCGGAGGACGTAGAGATGGGGATGGGTGAGATCGAGGCGGCCGGCGAGCTCACAGCGACACGGATCGAGACTGCCGGCGAGCTCCCGGCGCCACGGATCGAGACGGCCGGCGAACTCCCGAAGGGGGCGCAGATCGGGATGGGTGAAGTCGTGGTCGTCATCGCCGTCATTCGCCGGTTTACCTGGTAA</cdnaseq>

Protein Sequence

<aaseq>MAEVAAGTGQLIGVAVATLLAAIFLAAALLGSRRRRRRAPLAGKPAAVGGCGVADGEGCGGDGRTDVIVVGAGVAGSALAYTLGKDGRRVHVIERDLTEPDRIVGELLQPGGYLKLIELGLEDCVQEIDAQRVLGYALFKDGKDTKLSYPLEKFHSDVAGRSFHNGRFIQRMRQKAASLPNVQLEQGTVTSLVEEDGTVKGVKYKTKSGEELKAYAPLTIVCDGCFSNLRRALCSPKVDVPSCFVGLVLENCQLPHANHGHVVLANPSPILFYPISSTEVRCLVDVPGQKVPSIANGEMAKYLKTVVAPQIPPEIYDSFIAAIDKGSIRTMPNRSMPAAPHPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLRNLHDASALCKYLESFYTLRKPVASTINTLAGALYKVFSASPDQARNEMRQACFDYLSLGGVFSNGPIALLSEFSLQSACGIIFPIIKAEVNNIIRALAMRHRLSEKPSLHIGKKQTKLLSAQRRKSRWDRADEIPEDVEMGMGEIEAAGELTATRIETAGELPAPRIETAGELPKGAQIGMGEVVVVIAVIRRFTW</aaseq>

Gene Sequence

<dnaseqindica>1..255#2262..2373#2480..2654#2936..3104#3184..3402#3494..3769#3854..4007#4279..4332#4755..4851#5081..5306#ATGGCGGAGGTCGCCGCCGGCACCGGGCAGCTCATTGGCGTCGCCGTGGCCACGCTCCTCGCGGCGATCTTCCTCGCCGCCGCGCTTCTTGGCAGCCGCCGGCGCCGGCGGCGGGCGCCGTTGGCAGGGAAGCCTGCGGCCGTGGGTGGCTGCGGGGTGGCCGACGGCGAAGGGTGCGGCGGGGATGGCCGGACCGACGTCATCGTCGTCGGAGCCGGGGTCGCCGGATCTGCGCTGGCATACACGCTCGGAAAGGTGACTCCTTCTCGCCTACTTAGTTCGCTGGAGTTTTCCCATTGGTTTGGGGGCGGAACGTTCGGATTTTTAGATGGGTTCTTCTTCTTTTTAAATCTGCAAATTTGTTGCTTACGCTTCGTTGAGAACAGGGTGATTCAAAAAAAAAGATTGAAGAACACTGCAAGATTGAATATTTTTTTTTCCGGTAAGTTAGGCGCAAGGACGAATTTTTCTATCCTGAAGCAGAGTCTTAAGTACAAATTGCCAACCCCTGCTTATGCATGCGTCGAGCTTTGATTTATTTCTGGAAAGGCAGCTGATGTCTTAATCCAAGAAGACTAGATTCGTGTATGAATTAATTGTGATTTCATGCAATTTCTTGTTTTGATCAATATTTTTTTCATGTTCTAGCGTGCCGGTAGAAAGCGAAGTCTGTCGGTCTCTTCCTTTTTTGTGGACATGAAATTTGTGTGGCCAATAAATGTTGGTGTGCAAAAAATCGCATGTCTTGTAACTGTGATGAGAAATCTCTCTTTTCCATCTGCAGTACTCCATACTGGCCGTGGCCGGTGACCACAAGTCATCTGGATGCAGCAGAAAAGGGACAGAAAGTGACAACCAAGAGGAGAGTTAATACATGATTTGAATAAAAATAAAAGATGAATCTAAGGTGTTCTATAAAACCAATACAATTTTGGTTATAGCAAAACAGATTTTGTTGATTGGTGATGCAAATCTTTTACTGCAGTAATAACAATATAAATTAACTCAAACCGAAAAGTTTTTCTCAAACAAGTTGTATAGAGCATGTCCAATATAATTCCGACTGTATACAGTTTATCTTCTAGTCTGGAACTACTGTAACTCCATTACTATATCTTTTCTTATATAGAAGCAAAGAGTCACTTGTGTTCCCTTCTCTGGTTTTCTATTCTTTATCGTGCTCCTTTCTATCTGCATCAACAGAGCATTTATGTGCTCTATCTTGACACAATGGAATGCCCAACTAAATCAATGACCCAATTTATTTTCCCAACTCCCAGCAACTATGAGAGTGACACCTTCTTGATAGAAAAACTGATACTGCTTGGGCATATCTTGAGTTCTTGACTTTGCGCAAACTTAGGAGGTGGTAAAATTGAGATAGGTCCAGGAGAAAATGACTAACTCACCCCATGACTGCTTTTGAAATATGAGTGAGAACACTTTGTGTGAGCGTAAATTGTATACACACAAAGGATAGAGTGAGAACAGTGGAGGCATGGTTGACAATGTCATTAGAACTAAATGTTTGTATTACCATCAACCATTCAATGGAGGGGATACTATACCTAGCACGTTTGTTCTTTGTAAATGATACTCCCAATGATGATTTTAACAAGGGCTGTTTTAATTTTAAAAAAGGTCAAAATATATACATATTGACCATAGTCAATTTACAAGTACATTTAGTGTATAAAAATTATACAAATTCGCTCGCATTTCAACGTGCTCTCACAAAATGTCCGTTTTATAGTTTGAAGAATATATTTTATGATAAATCAATTGCTAAAGTTTAATAGACTTTTCAAAAAAAGCATCCCCTATAAAAATAATCATCGGATGTATTATATTTTTGAGTCTGCACAAACTTCCAAAAGCTGACCATCAATATGCTTAAAAACACCTAGGTTGCCCATTGCCATATGAATTCACTGCATTTCACCTTAAAATTACTTTCAATAATATTATTTTGTATTGATATGATCACAATTTGCCCTTGTTATTCAGAGACTTATCGATTAATACATGATTTTATACTGAGATTCTAATGTTTGTAGTTTTGTGGGTTGCGATGTTCCGTTAGTCACCTAGTGCTTCTGTATTTGTTAAAAGCACCTCTACTGTATCATTTTTGCTCTCTAATAAAAACTTATTGATATTAAGGCAATTCAATGGCTCATTATGATCAAATGATGAATTACAGTGAAACAATTATCCCTGAGATTTCTCTTATCACTTTTTTTTTTCTTTTTGTGACTTAGGATGGCCGTCGTGTGCATGTTATAGAGAGAGACCTAACAGAGCCTGATAGAATTGTCGGTGAACTGTTACAACCTGGTGGCTACCTGAAATTGATCGAGTTGGGTCTCGAGGGTAAGCTTCCCCCTTATCTCTCTATGTATGTGTATATGTGCGCGCGCGCGCGCGTATTTCTTATAGTATTAGTGGTACAGTGGACTAAATCTTTAACTATATTCAGATTGTGTTCAAGAAATAGATGCTCAGCGTGTCCTTGGTTACGCGTTATTCAAAGATGGGAAAGACACAAAACTCTCCTATCCCTTGGAGAAGTTCCACTCAGATGTTGCTGGTAGGAGCTTTCACAATGGACGGTTTATACAGAGGATGCGCCAGAAAGCTGCATCTTTGCCTAAGTAATAGTCTTTCTCGACACAAATTTATCTTTACTAGAATTTTTGACATACTTATTTTTATGATTTTCTTGTATTGTTTGATGTGAGCATTTCATTAGTATTTTAGTTGCCTCTAGAGGATTAAAATATTAGATTATGTTTAAGTGCTTATTTTGCTACTCTTCCAGAATGATGTATTTCACATGTTCTTTCCTTCTACATGCGCCGTATCTGGATGTATCTAATTCGTGCACCTGCATGTGACATGAGGTAAATGTTTGGCATTATGTTTTATATTTCAGTGTTCAATTGGAGCAAGGAACTGTTACATCATTGGTTGAAGAAGATGGTACAGTTAAGGGTGTTAAATACAAGACCAAGTCAGGTGAAGAATTAAAAGCATATGCACCTCTGACAATTGTATGCGATGGCTGTTTCTCAAACCTTCGCCGCGCCCTTTGCTCTCCAAAGGTACAGTTTTTAGATTTTGCACTATCCTTTTTTGTTCATGCATGTAGAAGATCTAATATTGATGGAAATATGTGGTTAGGTTGATGTACCATCTTGTTTTGTTGGGCTGGTCCTGGAGAATTGTCAACTTCCTCATGCAAACCATGGCCATGTTGTCCTGGCCAATCCTTCACCTATCCTATTTTACCCAATAAGCAGCACTGAAGTTCGCTGTTTGGTTGATGTCCCTGGTCAGAAGGTGCCTTCCATAGCAAACGGTGAAATGGCAAAATATCTCAAAACAGTGGTTGCACCTCAGGTATTATTTTGCTATTTCAGTCAGTCTTGTCCCGAGTTTTTGCTTGCCTACTCATAGCAACTAAATGTCAATGGAAATGTTCTGTTGACAGATTCCTCCAGAAATCTATGATTCATTCATAGCAGCCATTGATAAGGGAAGCATAAGAACAATGCCAAACAGGAGCATGCCGGCTGCTCCACATCCAACCCCTGGTGCACTTTTGATGGGTGATGCATTCAACATGCGGCATCCTTTGACTGGTGGCGGAATGACTGTTGCATTATCTGACATTGTTGTGCTACGTAATCTTCTCAAGCCTCTCCGCAATCTGCATGATGCATCTGCTCTTTGCAAATACCTTGAATCATTCTATACACTGCGGAAGGTTAGTCTTCACTCTTCATTTCACAATTTACCACCCAACTTCAAAATGTATGCTGTCTAATGTATGGCGCTTTCATGTTCACAGCCGGTTGCTTCTACCATAAACACATTAGCTGGTGCTCTATACAAGGTTTTCAGTGCCTCACCTGATCAGGCTAGGAATGAGATGCGCCAAGCCTGCTTTGATTACTTGAGCCTTGGAGGTGTCTTTTCAAATGGGCCTATTGCTCTTCTGTCTGGTCTGAATCCTCGACCATTGAGTTTAGTGGCACATTTCTTTGCTGTCGCTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGTGAGTATCTCAAATCTTATTCTTCAAAGTTTCAAACTTTACTATTTCCATCGTGGTACCATTCATGGACAGTTTTCTATACAATTTTTTCATTCCCTATCCTAAACCCTAAACGCTAAACCCTAAATAGACTTTTTTTTTCCGTTTCTATACTATTGCTAATCCAGAGTTTTCACTGCAGAGTGCATGTGGTATAATTTTCCCCATCATCAAAGCTGAAGGTGTGAGGCAAATGTTCTTCCCCGCCACTGTCCCTGCCTATTATCGTGCTCCTCGTCCAATGGAGTAAGGGGGGAAAATGAAAGGAGAAGCGAAGAGAAAATCCCTGCCACTGTCCTGATCGGCGGATGTTTTTCGTGGATGGCAGTTTTCCTGTGTAATTGGTAGTAGTCGTCAGGCCGTGAGGTTGTGTGTGCTGTTCTAATGGAACGAGGGGACCTGTATACACCGTCACATTCCCTGTACACTTGCCACTTTCGTTGTTCCGTCAGGGATGCATGTCGACTGCTAATCCTTAAGCTGTATATCCCCCATGAATTCATCATGATTGCGTCTTTGCTCTAACTGGGTGCGTTGCTAATCCACTGAATTCCATTGGGTAGGACTCCTGTGTGTGATTGATTGATACAACTGTGTTTGCTAGTAAACAACATCATTAGGGCATTAGCAATGCGCCACCGTCTCAGCGAGAAGCCCAGCCTCCACATAGGCAAAAAACAGACGAAGCTCCTGTCTGCCCAGTGCGTGTAGCTTTGGGTGGGGTCCATAACAGATTTTTTTTCTCACGCTGGGCCCACCATGGGAATACCTTTCCCCACCCATCTCTCTCCCCGAGCAAATCGATCAATCTCCCGTACGTGCGCTGCTCCTTCTCTCTCCCGTGCCGCTGCTCCTTCTCCTCCGCCGCTTCTTCAGATCGATCCCGTGCTACTGCTGCTTCCTCTCCTCCTCCTCCTCCTCCTCCTCCAGGCGGCGCAAATCGAGGTGGGACAGGGCCGACGAGATCCCGGAGGACGTAGAGATGGGGATGGGTGAGATCGAGGCGGCCGGCGAGCTCACAGCGACACGGATCGAGACTGCCGGCGAGCTCCCGGCGCCACGGATCGAGACGGCCGGCGAACTCCCGAAGGGGGCGCAGATCGGGATGGGTGAAGTCGTGGTCGTCATCGCCGTCATTCGCCGGTTTACCTGGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011175