Difference between revisions of "BGIOSGA011213"
(Created page with "{{IndicaGene|
GeneName = BGIOSGA011213|
Description = MADS-box transcription factor 1|
Definition = Oryza sativa Indica Group BGIOSGA011213, complete gene.|
tag = LHS1|
t...") |
|||
| Line 1: | Line 1: | ||
| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{IndicaGene| | {{IndicaGene| | ||
GeneName = BGIOSGA011213| | GeneName = BGIOSGA011213| | ||
Revision as of 15:38, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
BGIOSGA011213 |
|---|---|
| Description |
MADS-box transcription factor 1 |
| Definition |
Oryza sativa Indica Group BGIOSGA011213, complete gene. |
| LocusTag |
LHS1 |
| Ensembl Transcript ID |
BGIOSGA011213-TA |
| Ensembl Protein ID |
BGIOSGA011213-PA |
| Length |
8092 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:6558914..6567005 |
| Sequence Coding Region |
6566821..6567005,6561214..6561286),complement(6560381..6560442,6560161..6560260),complement(6559912..6559953 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome03:6558914..6567005 source=RiceIndica03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome03:6558914..6567005 source=RiceIndica03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGGGGAGGGGGAAGGTGGAGCTGAAGCGGATCGAGAACAAGATCAGCCGGCAGGTGACGTTCGCCAAGCGCAGGAACGGCCTGCTCAAGAAGGCCTACGAGCTCTCCCTCCTCTGCGACGCCGAGGTCGCCCTCATCATCTTCTCCGGCCGCGGCCGCCTCTTCGAGTTCTCCAGCTCATCATGCATGTACAAAACCTTGGAGAGGTACCGCAGCTGCAACTACAACTCACAGGATGCAGCAGCTCCAGAAAACGAAATTAATTACCAAGAATACCTGAAGCTGAAAACAAGAGTTGAATTTCTTCAAACCACACAGAGAAATATTCTTGGTGAGGATTTGGGCCCACTAAGCATGAAGGAGCTGGAGCAGCTTGAGAACCAGATAGAAGTATCCCTCAAACAAATCAGGTCAAGAAAGAACCAAGCACTGCTTGATCAGCTGTTTGATCTGAAGAGCAAGGAGCAACAGCTGCAAGATCTCAACAAAGACTTGAGGAAAAAGTTACAGGAAACCAGTGCAGAGAATGTGCTCCATATGTCCTGGCAAGATGGTGGTGGGCACAGCGGTTCTAGCACTGTTCTTGCTGATCAGCCTCATCACCATCAGGGTCTTCTCCACCCTCACCCAGATCAGGGTGACCATTCCCTGCAGATTGGGTATCATCACCCTCATGCTCACCATCACCAGGCCTACATGGACCATCTGAGCAATGAAGCAGCAGACATGGTTGCTCATCACCCCAATGAACACATCCCATCCGGCTGGATATGA</cdnaseq> |
| Protein Sequence |
<aaseq>MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSSSCMYKTLERYRSCNYNSQDAAAPENEINYQEYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKKLQETSAENVLHMSWQDGGGHSGSSTVLADQPHHHQGLLHPHPDQGDHSLQIGYHHPHAHHHQAYMDHLSNEAADMVAHHPNEHIPSGWI</aaseq> |
| Gene Sequence |
<dnaseqindica>1..185#5720..5792#6564..6625#6746..6845#7053..7094#7185..7226#7445..7599#7978..8092#ATGGGGAGGGGGAAGGTGGAGCTGAAGCGGATCGAGAACAAGATCAGCCGGCAGGTGACGTTCGCCAAGCGCAGGAACGGCCTGCTCAAGAAGGCCTACGAGCTCTCCCTCCTCTGCGACGCCGAGGTCGCCCTCATCATCTTCTCCGGCCGCGGCCGCCTCTTCGAGTTCTCCAGCTCATCATGGTACGTATAGCACCAAACCAACGCCGCCGCCGCCGCCGCCGGCGTGCTTGTTCCGGCGCAGCAGCGCATCATCATCGATCGATCTAAGTCTAATAAGATAATCAATTAACCCTAACTAAATAAAATGATAAGAACAGTATATATGGTTATGATCAGTGAAACACTCGTCGATCTGAGGGAAAATCCGGTCGAGATCGAGGGAGTGGGGAGACAAATTGGACTGCAGGCTAGCTAATTTAATCGTGTCGATCGATTTCTAGCTTTTGTTGATCTTTATATATACGAACGCATGCACTTTCCCCTTTGTTTTTTTTTCCCTTCGATCTGCTTGGAGCTCATATGCTATAGATCTTGGGGCATATGTATCTGTCAGCTTTCGAGAGCGGCTATGTCCATCGATCCCTCTTTTTTTTCTCTTTCTTTTTGTAGTATCAGCTGCCATGCATATATCAGATTTCGTTTTCGCGTGCTTTTAGTGCTTCACTTATCTGTTCGCCATATCTGATTTCTTCTCATCCTTTGCCGACGTCGTCTGAGCAGTCTGACCTCCAAGATCTGGCGAAATAAACCTCAATCGTTGCTATTTCTTGCCTTGAATCTGCATAAACATGACAATAGATCCTTCTATTTTTTTTCTTCAAGACAAGATCTTGCTGTTTCTTCCCTTGCTATTTTTATTCAAAGATTCTTCTTTTTTTTTTCTAAAAGAACTATATATATATGAATCGAGTTTCATCTTCATCGATCTGTCTCTCTCCTTTTGTTTTCTGTAAACACACACACGAGCGTACGTATATATACTATCATCTCTACTTTTATCAAAAAGAAACACACATGTTCTAGCTTCAGATCCCAAAATAATCAAACAGGAAAATATATATAATATGCAATTAGTTCAGATCCCGAGGTAGATTTCTTGATTATTTCCATTTTCCAAAGTGAGGCGCGCGACAACTCGACGCGGTTCCTCTTTGCACACACACACAGTATAACTGTACGCAAGGGGTAAGAACAAAGGAGCAATCCCTTCTGGGTTGCTGCTTGCTTCTCCCATTTTTAGCTATTTCAGAATTTCACTTTCTGAGACTCATCTCTCTCTCTCTACCAGCTGCATTATTTCACTTCCCTTTTTTCCCATTTCTGCCTATTACACGGATGGCCTCTTTGTGGACTCGTCCAAATTGAGGCACGGTAGCTGGTGTCAAAATGAACCTGCAGGCCCAGCCCGGTTATGTATATGTATAGCTATATAGCTTTTCTTGCAAGAGGTATATACACTTTGTAGTTTTAGCCAGTGGTCCAGCTAGCCATGGATGGATATATTATACACACGTATATATAGTACATGTATGTACGAGTGTTAATTAAACTCGTTTAGTTAATTTCCAAAGTCCTTTTTTATTACTACAGCTAGCCTGATCTGTGTGTTAGTGTGTTACTGTTCCATTAGTTACTGTTCTATTGAAGAGAGCGCGTACACGTTGTTGTTTTATTTCTCTTTTTCCGATCCGGTGTTCCTTTTTTTTTTCTTTTGGTCATCTTCCTCGAGTCCCGAGCAGTAGAAATACTACTACTGCCCTGCAAAGCACACACATCAAGTGATGTGTTTTTCTTCAGAGCTTCAGACGTGTCATATCAAGCAGGTCAGCACGCATTACATGCAATATAATACTCCTATATGGACACGCAGAACTCACTTTGATCATGTGTGACCAAGCTGGATGAGCCGTTTATTTGTTGTTGGGACAGGGTATTGAATCATTAATTGCGGTTTTTCCTCTTTTTCCTGTCTTGTTCTACTCAGAGAATTGAACGGTGAACTGTATAGGCAGAGCTAGTCCTGCATGCATCGGTTTTCTGAAATTATTAACTATACACACACATGCACAATTGCTAAATCTGGTATACATGTCTTGCTGACTCACATATTCGTTCCTCCTAATTAAAGCACTCATTTATTTATTTTACACGGTTTTCAATGATATACTTTAAATATTAATTTGTTTGATGTTATATTTCTATGAATATGAAATTAGCATCATATGAAAATACTTTAAAACAAATATAGTGATATAACATGCATAATACTTAGCATATACTTGTATGATTAGCATGGTCATTAATCAAAAGTTGCCGAGCTTGAATTTTCTAAAGGACAGGGTGCCTTGTAATTTGGGACAAAGAACCATTGGAAAACGAACACAAAGAAACTTTCATTACATTAATTATCTGAAAAAGAAAGAAACTTTCATTAACCTCGTACAGTAAATAGAAAAGAGGAACTATGCATGTATAACGAAATAGCTAGGATCACAGCAATTAATTAGTTGTTCTCTGGCTTTACTTTTCTTTTGGAGTAACTTTAATTTTTCTTTGGAGGATGAAGTAGTTAATTATACAGGTTTCCAATTCTTGTTTGGTAGATCCTTTTTTATGTTCCTGGAAGAGCTACTATATTTTTGTACTTGAGATGGAGCTGAGGTACCGTTATCTAGCTATGTCGCATCTCAAGGAGTTACGAATTAACATATATCACCAATATCACAAAAATGCTCCATACAAAAAGATCATAAAAATTCTTGAATTTGCTTGCTGTGTTTTTTTACTATATATGCTTGGAATTAAAAAAATGACTGAATTAATCGTTTGCAATCTTTAACGGTGCGTGCAGTACCAAATTGGAAAGGTATCCACTTGTTCAAACTTAAAAATATTTTTTTACTGATATTACTCTCTAAAAAGGTGCATGGGAAATGCTATTGGAACTACTAGTTTTCGGGACATTATATATATATATATATATATATATATATATATATATGGACTTATGATATGGGCCAGATACCTATATATATAGAAGATATATGTGTGCTACTACCTCCATTCAACAATACAAGCATTTGAGCCAGTTCTGGTCAAGGATATAAACATCCTGCACTATTAGCTTGTACTTGTCAAATTAATGATCTCTAATTCAAACTTTCTTGCTACTTTACCCCCAATCACCCTTCCCAACCATCTTAATCTTTGCTAAACATTCTAGAAATGCTTATTGTTGGATGGAGGAAGTAGCTATTAACTACTCCTATAGTTTTTTTAACTACCTCATATTAATTTTGTAATCCTAATAAATGCACTATATATGCCCACTTTTACCGTGTTTCCAAACTGGCATCAAGCTAAAATGAATGTTAATTTAGTTTCCCCATAATTTTATGAGAATCGCAAAATTGTACCTATTTTAAACAAATCAAAGTCACTGAACAAATGAACGGAGGTTAATTATTATATTCACCTGATATAGGCAGACTAGGTTGGGCTAAGAGGGACATTAATTTGGGCATCTAGGTTTTGAAATGGGAGATATGGAGAGTGAACCAAAAAAAACTGTTAGTGAATTAGTACATGATATATACTAGTATTATTAGTGGGAACCTAGAGAAATGCAAAGAATGTTGCGCAAATCATCATTTTGTGTAAATTAAAATGGGATATACACTATGGGGAACTATAGCTGAGTGTCAATCCCCACCTTTTGTTTGTAATTAAACATGTGTTTATGCTACAAATTACTCCCTCCGTACTCATAAAGGAAGTCGTTTAGGACAATGTTTAAGTCAAACCTTGGGAATATAAATCATGAATAACTCTCAAGTTGTTGAGTTTGAAGATGTAAAAAATATATGAATAGATTTGTCTTGAAAAATACTTTCATAAAAGTATACATATATCACTTTTCAATAAATATTTTATAGAAACAAGAAGTCAAAATTGTGTTTTGGAGACCGTGTCACTGTCCAAAACGACTTCCTTTACGAGTACGGAGGGAGTATGTTCTACATATTGGCTAATATTGTTGAACCCTTCGGATCAATCTTAGACACAGTAGCCATTTTACCCACTGATGCAGCAACCCAATTAGGTATCTACTAATTAGCATCATAGTGCAAATTTGTACTTTTCAAGTGGAAAATAGAAATTATTTGTCCTCCTTTACTTTAATTTCTTGATAATATGATATATGTAACATAATTTCTCTTTGCTCCCAAGCATATAAAAAACTTCAATTTGATATGTCCAAAAAATGTCATATATATAGCATGTAATCCTCTGTGGCAAACACGTTTTTTTGGCTCAAATTAAGAAGAGGAAAAAATGGTATATATGTATAAACCTAACAAAAATGCCCCAACAAGAATAGCTTTATTTTGTGAACAAGGTCATATAGACCAGGGAACAAAAACCCTGTACTGTGCTTCTATTTTGCTATGCATTTTGGATAAGTGATTCTACAGAAATATGACTATATAGGAGATATTCTCAAATCTGATCTTTTCTATTAATTAGCCCATACGATATGAAGACATATCTTCCTCTGTTCTGATTCTATTTGTTGTGCTAAGATAGTCTACAGGATTTGCTAGGTTGCCACCTGCCGTCAACAAAATTCAGCTCATCAGATTTTGTTATAGTTGCTAGCACAGTTATATTATACGTATATCTCTTTTGAGAATATATTATTACAGTCCATTGATTTTTCTTGTAGAGTGGAAAATATTATTGTGTTTTCTAACCGTAGGAGTTCATGTGGTGTTATTTATTTTGGATAATGTGGTGTATTTTTATGAGAAATCAGGATCGCGTCACATGAAAGTTCATCTAATATATTATTAAGTGCATCGTAGCAACAATTCATATATTAACTCAAAGGTAGCTTTGAAATTAAGATGCATGTCATTAATGCATAATAGAGAAATCAGGTTACCAAATTATATTAAGCCCATATATTAACTCAAAGGTCATAGCTTTGACAAATGCTCCTTACAGATTTCTCCTTGAACCAATTTGTAAAATATCCTCTCCTTGGGTTTTTGCGCGAACGCTAAATATCCTTTGTTTAACAACTTCGTCAATTTGTCCATTTCATATGTGTGAACATCCTTGTACATTCTTTTTTGTGCCGTTTGAAATAAAACTTTGAATAAATATGCACAACTTAAATGCTTAAATGTCAATTGGATTTGGATGAAACAAAACCAAAGTTTTAGAATTTACGATCTATCATTATGAATTTATGTATGATATATCACACTCTTTCTGAATAAACTTCAGAATAATATAAATTGCTTAATTATGGTATACATGAGCATATATAGCTTGCGCAAATCAAAACTATACAGTAGGTGTGTGTTCAATTCAGAATAGTATTCTATTTCGAATTTAAATTAATAATACCTTCTGTAGTAATTTCTATATTAGAAAATTTATACATACAAGGAGCACTGTTAATTAGCTAGCTAGCTTTATGGGTTCCACTAATCAATTTATATATAATAATGTGCTAAACTATACAGCGTCCATGCATTTTTATTCTTCATGACTAATTAATTTGATTCACCATTAATTAATTCTACGTACAATGTTCGAATGTGTGACTATATATGCTGCATCTGCAGTTCTGCACCTCATTCAGTACTAAATTCAAGTTCAGGTTCATTAATTAATTCACTTATTCCTTCATTTTTCACTTCCAGCATGTACAAAACCTTGGAGAGGTACCGCAGCTGCAACTACAACTCACAGGATGCAGCAGCTCCAGAAAACGAAGTAAGCATCCTCTTAGTTTCTTAATTAACAATCTTTGACAAATCAATTACTTCTTACTAGCAGAACATATATTATGATTTATGAGTCAGTTATTCGCTTATAGTATTCTCTACTCACTAAAAAGGATTATGTTACCCTTTTTTTTCTTATGAGATGAAGGGTCGTGTTATCTTTGTTAATTTTTTTGGGACATTGATGTTATCCTTAATGTCGAATGCATATATAGGGTTTTCTCTAGCTTCATGTTTTGCTCTGATATGTGCAGTGATGCTCATGCAAGTGAAAATGAGCTGGGCTCTTACCGTGCGTAGGTTAACAGGCCGGCCCATTAATAGCTAACAGTTTAGATGGGCCGCAATGCTAGATGCCGCGGGGGACGAAGGCCTTACATTCAATGGGCCGTAGGGCGAGATACGGCCCACGTCGGAGGTTGTGGGCCGTAGGGCGCATTATGACTTTGGGCCGAATATGCTTACTTAAATTGGGCTTAGAATTGTGAGAGGTTTCTGTTCGGATCCGAAGAGATTGATGCCATGTTGTCTATGTTAACATTCCTCATGCATAAGTAGGTTTAGCTGATAGTCTAAAACAGGAGTGAATTTAGTAGACTTGGTTTGCAATTAAAATGCTACATGGTTTCCTGAATACTTTGTTGTGCCTACAGTTTGTTAACCATCTTTTTTTTCCCCTTCGGCCAATATGGTCAGATATCTTGTAGCTTCAGGAGTCATGAGCTAATCCGTGTGTCTGCAATTTTGTTGTTTAAACCAGATTAATTACCAAGAATACCTGAAGCTGAAAACAAGAGTTGAATTTCTTCAAACCACACAGAGGTAGTCTTCAGAGATGAATGTGGTCAATCATTTCAGCTTCTTATCTACTACAGAGTTGCTATGTTCTTCCTGAGGGACAGAGTTTCTATGACTTACTAGCAAGCACTTCACACCATGCAGAAATATTCTTGGTGAGGATTTGGGCCCACTAAGCATGAAGGAGCTGGAGCAGCTTGAGAACCAGATAGAAGTATCCCTCAAACAAATCAGGTCAAGAAAGGTAAAAATGTTTGTTCGCCATGTTACCTATGCAAGCAAATGGCACTTTTTGATATGCTCTTCTTAAACACTGAACCTAGATTAGATTAATAATGAGCTTATTATAATTTTTTACTGCAACTATCATGTAATTCGGTACTTATTACCCCTCAACTGTATGGATTTGTTTATGTGAATGGCTTTTAACACAGGCTCAATATTTCTGCAGAACCAAGCACTGCTTGATCAGCTGTTTGATCTGAAGAGCAAGGTACTGAATAAATTCTGGTTCTTTTCTTTTTTCCTCTGCACCTAAATTAAATCTGTGCACATATGACAAACACTAAAATTGATTCTGCAGGAGCAACAGCTGCAAGATCTCAACAAAGACTTGAGGAAAAAGGTAACACAGCCATCGATCACCCTGAAAGTCATTGCGTGCATCAGTATTCGGACAACATACATCTTTTTCCTTGCTAAAGTCCCAACCATGATCTTTTCATGGCTGCTAAAATGTTTCACGAAAGTTACAGTATTTGCACGGAATAAACCTTTTTCCCCGGTACGGCTTAAAAGTTAATCAGCTTCTCATACCGCTGAAGCGTTTGTTTGTTCGTGCAGTTACAGGAAACCAGTGCAGAGAATGTGCTCCATATGTCCTGGCAAGATGGTGGTGGGCACAGCGGTTCTAGCACTGTTCTTGCTGATCAGCCTCATCACCATCAGGGTCTTCTCCACCCTCACCCAGATCAGGGTGACCATTCCCTGCAGATTGGGTATTCTTCTTTTCTTCCAGTTACAGTTAATTTCTTGCCTGAAAAAATTCCCAAAATGCAGAGGTCATGTTCTTTTTAAACTATTCACTAAATTATTAAACAGAGTATTTGCTCAAGTTCGAACAATACACTTTCTTAAAAGATGGTTTGCTATGTATTACTTAGACCACTTATCTCGATTTACTTGTATATTTTATTTTTTTTCAAACATTTAATTTATAACTATATAATCGAGTATATCGATAATCCTGACAATAATTCGCCCAATAATCTAGATCAAATTGGGCCTAATTTTGTCTTTGTTATTCAGTAATTTAAAATTTATGTATATATACTCCATCATTTTCATAGCTTTAATTTAATTTTTCCTTGGTGAAGGTATCATCACCCTCATGCTCACCATCACCAGGCCTACATGGACCATCTGAGCAATGAAGCAGCAGACATGGTTGCTCATCACCCCAATGAACACATCCCATCCGGCTGGATATGA</dnaseqindica> |
| External Link(s) |
